RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 PDS5BQ9NTI5 1447 aa30.97■■■□□ 2.55
TRIM3-201ENST00000345851 VPS8Q8N3P4 1428 aa30.94■■■□□ 2.54
TRIM3-201ENST00000345851 KIF21AQ7Z4S6 1674 aa30.94■■■□□ 2.54
TRIM3-201ENST00000345851 BCANQ96GW7 911 aa30.93■■■□□ 2.54
TRIM3-201ENST00000345851 TDRD9Q8NDG6 1382 aaKnown RBP30.89■■■□□ 2.54
TRIM3-201ENST00000345851 DHX57Q6P158 1386 aaKnown RBP30.84■■■□□ 2.53
TRIM3-201ENST00000345851 ARAP1Q96P48 1450 aa30.83■■■□□ 2.53
TRIM3-201ENST00000345851 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
TRIM3-201ENST00000345851 KCNH8Q96L42 1107 aa30.82■■■□□ 2.52
TRIM3-201ENST00000345851 P3H3Q8IVL6 736 aa30.8■■■□□ 2.52
TRIM3-201ENST00000345851 ARHGAP35Q9NRY4 1499 aa30.74■■■□□ 2.51
TRIM3-201ENST00000345851 KANK4Q5T7N3 995 aaPredicted RBP30.7■■■□□ 2.51
TRIM3-201ENST00000345851 FKBP8Q14318 412 aa30.68■■■□□ 2.5
TRIM3-201ENST00000345851 GAPVD1Q14C86 1478 aa30.6■■■□□ 2.49
TRIM3-201ENST00000345851 ATP1B4Q9UN42 357 aaPredicted RBP30.6■■■□□ 2.49
TRIM3-201ENST00000345851 WDR97A6NE52 1622 aa30.57■■■□□ 2.48
TRIM3-201ENST00000345851 AQRO60306 1485 aaKnown RBP eCLIP30.55■■■□□ 2.486e-6■■■■□ 25.1
TRIM3-201ENST00000345851 MRC2Q9UBG0 1479 aa30.53■■■□□ 2.48
TRIM3-201ENST00000345851 RBM19Q9Y4C8 960 aaKnown RBP30.52■■■□□ 2.48
TRIM3-201ENST00000345851 ABCA5Q8WWZ7 1642 aa30.5■■■□□ 2.47
TRIM3-201ENST00000345851 TARBP1Q13395 1621 aaKnown RBP30.48■■■□□ 2.47
TRIM3-201ENST00000345851 ERCC6Q03468 1493 aa30.47■■■□□ 2.47
TRIM3-201ENST00000345851 FHOD3Q2V2M9 1422 aa30.46■■■□□ 2.47
TRIM3-201ENST00000345851 ITGAEP38570 1179 aa30.45■■■□□ 2.47
TRIM3-201ENST00000345851 CUL7Q14999 1698 aa30.45■■■□□ 2.46
TRIM3-201ENST00000345851 ZNF608Q9ULD9 1512 aaPredicted RBP30.41■■■□□ 2.46
TRIM3-201ENST00000345851 NEFLP07196 543 aa30.4■■■□□ 2.46
TRIM3-201ENST00000345851 DDX10Q13206 875 aaKnown RBP30.4■■■□□ 2.46
TRIM3-201ENST00000345851 TRIM52Q96A61 297 aa30.32■■■□□ 2.44
TRIM3-201ENST00000345851 CTTNBP2Q8WZ74 1663 aa30.29■■■□□ 2.44
TRIM3-201ENST00000345851 WDR62O43379 1518 aa30.26■■■□□ 2.43
TRIM3-201ENST00000345851 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
TRIM3-201ENST00000345851 RRBP1Q9P2E9 1410 aaKnown RBP30.24■■■□□ 2.43
TRIM3-201ENST00000345851 MSH5O43196 834 aa30.24■■■□□ 2.43
TRIM3-201ENST00000345851 PCF11O94913 1555 aaKnown RBP30.23■■■□□ 2.43
TRIM3-201ENST00000345851 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.42
TRIM3-201ENST00000345851 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
TRIM3-201ENST00000345851 CCNB3Q8WWL7 1395 aa30.19■■■□□ 2.42
TRIM3-201ENST00000345851 HIRIP3Q9BW71 556 aaPredicted RBP30.19■■■□□ 2.42
TRIM3-201ENST00000345851 TIAM1Q13009 1591 aa30.17■■■□□ 2.42
TRIM3-201ENST00000345851 GRIN2BQ13224 1484 aa30.17■■■□□ 2.42
TRIM3-201ENST00000345851 RAB3GAP2Q9H2M9 1393 aa30.15■■■□□ 2.42
TRIM3-201ENST00000345851 FBLN2P98095 1184 aa30.15■■■□□ 2.42
TRIM3-201ENST00000345851 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
TRIM3-201ENST00000345851 SIN3AQ96ST3 1273 aa30.12■■■□□ 2.41
TRIM3-201ENST00000345851 MAPKBP1O60336 1514 aa30.11■■■□□ 2.41
TRIM3-201ENST00000345851 EFCAB5A4FU69 1503 aa30.11■■■□□ 2.41
TRIM3-201ENST00000345851 LRRC9Q6ZRR7 1453 aa30.1■■■□□ 2.41
TRIM3-201ENST00000345851 THOC2Q8NI27 1593 aaKnown RBP30.1■■■□□ 2.41
TRIM3-201ENST00000345851 ADAMTS12P58397 1594 aa30.1■■■□□ 2.41
TRIM3-201ENST00000345851 SNAPC4Q5SXM2 1469 aa30.08■■■□□ 2.41
TRIM3-201ENST00000345851 PPP1R15AO75807 674 aaPredicted RBP30.07■■■□□ 2.4
TRIM3-201ENST00000345851 PHLDB1Q86UU1 1377 aa30.06■■■□□ 2.4
TRIM3-201ENST00000345851 EIF4G3O43432 1585 aaKnown RBP30.05■■■□□ 2.4
TRIM3-201ENST00000345851 FAM50AQ14320 339 aaKnown RBP30.04■■■□□ 2.4
TRIM3-201ENST00000345851 CASKIN1Q8WXD9 1431 aa30.03■■■□□ 2.4
TRIM3-201ENST00000345851 ANP32CO43423 234 aa30.02■■■□□ 2.4
TRIM3-201ENST00000345851 ERICH6Q7L0X2 663 aa30.02■■■□□ 2.4
TRIM3-201ENST00000345851 FMN1Q68DA7 1419 aa30.02■■■□□ 2.4
TRIM3-201ENST00000345851 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
TRIM3-201ENST00000345851 SAMD9Q5K651 1589 aa29.99■■■□□ 2.39
TRIM3-201ENST00000345851 IRX6P78412 446 aaPredicted RBP29.99■■■□□ 2.39
TRIM3-201ENST00000345851 CHMP7Q8WUX9 453 aaPredicted RBP29.99■■■□□ 2.39
TRIM3-201ENST00000345851 CCER2I3L3R5 266 aa29.96■■■□□ 2.39
TRIM3-201ENST00000345851 MAP3K1Q13233 1512 aa29.95■■■□□ 2.39
TRIM3-201ENST00000345851 IQGAP2Q13576 1575 aa29.95■■■□□ 2.38
TRIM3-201ENST00000345851 CFAP43Q8NDM7 1665 aa29.93■■■□□ 2.38
TRIM3-201ENST00000345851 MTUS2Q5JR59 1369 aa29.9■■■□□ 2.38
TRIM3-201ENST00000345851 CDK11AQ9UQ88 783 aaPredicted RBP29.89■■■□□ 2.38
TRIM3-201ENST00000345851 FANCIQ9NVI1 1328 aa29.89■■■□□ 2.38
TRIM3-201ENST00000345851 SETD5Q9C0A6 1442 aa29.89■■■□□ 2.37
TRIM3-201ENST00000345851 LRRIQ1Q96JM4 1722 aa29.87■■■□□ 2.37
TRIM3-201ENST00000345851 GRIN2AQ12879 1464 aa29.87■■■□□ 2.37
TRIM3-201ENST00000345851 HNRNPUQ00839 825 aaKnown RBP eCLIP29.79■■■□□ 2.36
TRIM3-201ENST00000345851 KIAA0586Q9BVV6 1533 aa29.77■■■□□ 2.36
TRIM3-201ENST00000345851 MAGI1Q96QZ7 1491 aaPredicted RBP29.74■■■□□ 2.35
TRIM3-201ENST00000345851 SYNJ2O15056 1496 aa29.73■■■□□ 2.35
TRIM3-201ENST00000345851 CDK13Q14004 1512 aaKnown RBP29.72■■■□□ 2.35
TRIM3-201ENST00000345851 CEP170Q5SW79 1584 aa29.71■■■□□ 2.35
TRIM3-201ENST00000345851 DISP1Q96F81 1524 aa29.71■■■□□ 2.35
TRIM3-201ENST00000345851 MAGI3Q5TCQ9 1506 aa29.7■■■□□ 2.34
TRIM3-201ENST00000345851 UGGT2Q9NYU1 1516 aa29.7■■■□□ 2.34
TRIM3-201ENST00000345851 DEKP35659 375 aaKnown RBP29.66■■■□□ 2.34
TRIM3-201ENST00000345851 JPH4Q96JJ6 628 aa29.66■■■□□ 2.34
TRIM3-201ENST00000345851 NCOA2Q15596 1464 aa29.66■■■□□ 2.34
TRIM3-201ENST00000345851 TIMELESSQ9UNS1 1208 aa29.65■■■□□ 2.34
TRIM3-201ENST00000345851 FGD6Q6ZV73 1430 aa29.64■■■□□ 2.33
TRIM3-201ENST00000345851 EPRSP07814 1512 aaKnown RBP29.63■■■□□ 2.33
TRIM3-201ENST00000345851 KIAA0556O60303 1618 aa29.63■■■□□ 2.33
TRIM3-201ENST00000345851 HECW1Q76N89 1606 aa29.58■■■□□ 2.33
TRIM3-201ENST00000345851 TONSLQ96HA7 1378 aa29.56■■■□□ 2.32
TRIM3-201ENST00000345851 PRKCSHP14314 528 aaPredicted RBP29.54■■■□□ 2.32
TRIM3-201ENST00000345851 CCDC18Q5T9S5 1454 aa29.53■■■□□ 2.32
TRIM3-201ENST00000345851 CHIC2Q9UKJ5 165 aa29.53■■■□□ 2.32
TRIM3-201ENST00000345851 EHBP1L1Q8N3D4 1523 aa29.53■■■□□ 2.32
TRIM3-201ENST00000345851 PLB1Q6P1J6 1458 aa29.53■■■□□ 2.32
TRIM3-201ENST00000345851 PPP4R2Q9NY27 417 aa29.52■■■□□ 2.32
TRIM3-201ENST00000345851 PTPRKQ15262 1439 aa29.52■■■□□ 2.32
TRIM3-201ENST00000345851 MYOM3Q5VTT5 1437 aa29.52■■■□□ 2.32
TRIM3-201ENST00000345851 SUPT6HQ7KZ85 1726 aaKnown RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms