RNA–Protein interactions for RNA: ENST00000344604.9

ECM2-201, Transcript of extracellular matrix protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM2, Length 3,253 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-201ENST00000344604 CYB5RLQ6IPT4 315 aa13.69□□□□□ -0.22
ECM2-201ENST00000344604 DNMBPQ6XZF7 1577 aa13.68□□□□□ -0.22
ECM2-201ENST00000344604 MYT1LQ9UL68 1186 aa13.68□□□□□ -0.22
ECM2-201ENST00000344604 DEKP35659 375 aaKnown RBP13.68□□□□□ -0.22
ECM2-201ENST00000344604 IFT140Q96RY7 1462 aa13.68□□□□□ -0.22
ECM2-201ENST00000344604 KLHL34Q8N239 644 aa13.67□□□□□ -0.22
ECM2-201ENST00000344604 NCBP3Q53F19 620 aaKnown RBP13.66□□□□□ -0.22
ECM2-201ENST00000344604 PDE4CQ08493 712 aa13.65□□□□□ -0.22
ECM2-201ENST00000344604 CHIC1Q5VXU3 224 aa13.65□□□□□ -0.22
ECM2-201ENST00000344604 SYNJ1O43426 1573 aa13.63□□□□□ -0.23
ECM2-201ENST00000344604 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
ECM2-201ENST00000344604 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
ECM2-201ENST00000344604 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
ECM2-201ENST00000344604 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
ECM2-201ENST00000344604 PRDM2Q13029 1718 aa13.58□□□□□ -0.24
ECM2-201ENST00000344604 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.24
ECM2-201ENST00000344604 P3H3Q8IVL6 736 aa13.56□□□□□ -0.24
ECM2-201ENST00000344604 CLSPNQ9HAW4 1339 aa13.55□□□□□ -0.24
ECM2-201ENST00000344604 EIF4G3O43432 1585 aaKnown RBP13.55□□□□□ -0.24
ECM2-201ENST00000344604 RUSC2Q8N2Y8 1516 aa13.55□□□□□ -0.24
ECM2-201ENST00000344604 A0A0U1RQG5 324 aaPredicted RBP13.54□□□□□ -0.24
ECM2-201ENST00000344604 ARID3CA6NKF2 412 aa13.53□□□□□ -0.24
ECM2-201ENST00000344604 UBTFP17480 764 aaKnown RBP13.53□□□□□ -0.24
ECM2-201ENST00000344604 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
ECM2-201ENST00000344604 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
ECM2-201ENST00000344604 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
ECM2-201ENST00000344604 RTN4Q9NQC3 1192 aaKnown RBP13.5□□□□□ -0.25
ECM2-201ENST00000344604 KIF27Q86VH2 1401 aa13.49□□□□□ -0.25
ECM2-201ENST00000344604 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
ECM2-201ENST00000344604 ATP1B4Q9UN42 357 aaPredicted RBP13.48□□□□□ -0.25
ECM2-201ENST00000344604 GLIPR1L2Q4G1C9 344 aa13.47□□□□□ -0.25
ECM2-201ENST00000344604 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
ECM2-201ENST00000344604 IGF1RP08069 1367 aa13.47□□□□□ -0.25
ECM2-201ENST00000344604 ABCA10Q8WWZ4 1543 aa13.46□□□□□ -0.25
ECM2-201ENST00000344604 FGD1P98174 961 aa13.46□□□□□ -0.25
ECM2-201ENST00000344604 JPH4Q96JJ6 628 aa13.45□□□□□ -0.26
ECM2-201ENST00000344604 BCL11BQ9C0K0 894 aaPredicted RBP13.45□□□□□ -0.26
ECM2-201ENST00000344604 CARMIL1Q5VZK9 1371 aa13.45□□□□□ -0.26
ECM2-201ENST00000344604 ARXQ96QS3 562 aa13.45□□□□□ -0.26
ECM2-201ENST00000344604 MSH5O43196 834 aa13.44□□□□□ -0.26
ECM2-201ENST00000344604 ZMYND15Q9H091 742 aa13.44□□□□□ -0.26
ECM2-201ENST00000344604 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
ECM2-201ENST00000344604 LOC105371045A0A1W2PR82 267 aa13.4□□□□□ -0.26
ECM2-201ENST00000344604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
ECM2-201ENST00000344604 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
ECM2-201ENST00000344604 SYNJ2O15056 1496 aa13.39□□□□□ -0.27
ECM2-201ENST00000344604 VSIG10Q8N0Z9 540 aa13.38□□□□□ -0.27
ECM2-201ENST00000344604 BIVM-ERCC5R4GMW8 1640 aa13.36□□□□□ -0.27
ECM2-201ENST00000344604 MAGI1Q96QZ7 1491 aaPredicted RBP13.36□□□□□ -0.27
ECM2-201ENST00000344604 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
ECM2-201ENST00000344604 CHD1O14646 1710 aa13.36□□□□□ -0.27
ECM2-201ENST00000344604 TIMELESSQ9UNS1 1208 aa13.34□□□□□ -0.27
ECM2-201ENST00000344604 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
ECM2-201ENST00000344604 AAMPQ13685 434 aa13.33□□□□□ -0.27
ECM2-201ENST00000344604 RBM10P98175 930 aaKnown RBP13.33□□□□□ -0.28
ECM2-201ENST00000344604 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
ECM2-201ENST00000344604 ARHGEF11O15085 1522 aa13.3□□□□□ -0.28
ECM2-201ENST00000344604 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
ECM2-201ENST00000344604 ABCA5Q8WWZ7 1642 aa13.29□□□□□ -0.28
ECM2-201ENST00000344604 PBRM1Q86U86 1689 aa13.29□□□□□ -0.28
ECM2-201ENST00000344604 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
ECM2-201ENST00000344604 MIER1Q8N108 512 aa13.26□□□□□ -0.29
ECM2-201ENST00000344604 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
ECM2-201ENST00000344604 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
ECM2-201ENST00000344604 BCANQ96GW7 911 aa13.24□□□□□ -0.29
ECM2-201ENST00000344604 ERICH3Q5RHP9 1530 aa13.24□□□□□ -0.29
ECM2-201ENST00000344604 ERCC6L2Q5T890 1561 aa13.24□□□□□ -0.29
ECM2-201ENST00000344604 RAPGEF2Q9Y4G8 1499 aa13.24□□□□□ -0.29
ECM2-201ENST00000344604 WDR97A6NE52 1622 aa13.23□□□□□ -0.29
ECM2-201ENST00000344604 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
ECM2-201ENST00000344604 RIMBP3CA6NJZ7 1639 aa13.22□□□□□ -0.29
ECM2-201ENST00000344604 RIMBP3BA6NNM3 1639 aa13.22□□□□□ -0.29
ECM2-201ENST00000344604 RIMBP3Q9UFD9 1639 aa13.22□□□□□ -0.29
ECM2-201ENST00000344604 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
ECM2-201ENST00000344604 CEP170Q5SW79 1584 aa13.21□□□□□ -0.29
ECM2-201ENST00000344604 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.3
ECM2-201ENST00000344604 ARAP1Q96P48 1450 aa13.2□□□□□ -0.3
ECM2-201ENST00000344604 NBR1Q14596 966 aa13.19□□□□□ -0.3
ECM2-201ENST00000344604 PTPRGP23470 1445 aa13.18□□□□□ -0.3
ECM2-201ENST00000344604 ZNF316A6NFI3 1004 aaPredicted RBP13.18□□□□□ -0.3
ECM2-201ENST00000344604 NUP160Q12769 1436 aa13.17□□□□□ -0.3
ECM2-201ENST00000344604 FAM69CQ0P6D2 419 aa13.16□□□□□ -0.3
ECM2-201ENST00000344604 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
ECM2-201ENST00000344604 CARMIL2Q6F5E8 1435 aa13.14□□□□□ -0.31
ECM2-201ENST00000344604 RTL5Q5HYW3 569 aaPredicted RBP13.11□□□□□ -0.31
ECM2-201ENST00000344604 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
ECM2-201ENST00000344604 RSPH6AQ9H0K4 717 aa13.11□□□□□ -0.31
ECM2-201ENST00000344604 CLASP1Q7Z460 1538 aa13.1□□□□□ -0.31
ECM2-201ENST00000344604 DHX37Q8IY37 1157 aaKnown RBP13.09□□□□□ -0.31
ECM2-201ENST00000344604 PRXQ9BXM0 1461 aa13.09□□□□□ -0.31
ECM2-201ENST00000344604 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
ECM2-201ENST00000344604 FHOD3Q2V2M9 1422 aa13.08□□□□□ -0.32
ECM2-201ENST00000344604 CUL7Q14999 1698 aa13.07□□□□□ -0.32
ECM2-201ENST00000344604 TNIKQ9UKE5 1360 aa13.06□□□□□ -0.32
ECM2-201ENST00000344604 EEA1Q15075 1411 aa13.06□□□□□ -0.32
ECM2-201ENST00000344604 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
ECM2-201ENST00000344604 FKBP8Q14318 412 aa13.04□□□□□ -0.32
ECM2-201ENST00000344604 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
ECM2-201ENST00000344604 PLB1Q6P1J6 1458 aa13.03□□□□□ -0.32
ECM2-201ENST00000344604 HOMEZQ8IX15 550 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms