RNA–Protein interactions for RNA: ENST00000342435.8

PLSCR1-201, Transcript of phospholipid scramblase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLSCR1, Length 2,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-201ENST00000342435 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
PLSCR1-201ENST00000342435 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
PLSCR1-201ENST00000342435 FANCD2Q9BXW9 1451 aa16.97■□□□□ 0.31
PLSCR1-201ENST00000342435 TIMELESSQ9UNS1 1208 aa16.96■□□□□ 0.31
PLSCR1-201ENST00000342435 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
PLSCR1-201ENST00000342435 SALL2Q9Y467 1007 aaPredicted RBP16.95■□□□□ 0.3
PLSCR1-201ENST00000342435 FKBP8Q14318 412 aa16.94■□□□□ 0.3
PLSCR1-201ENST00000342435 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
PLSCR1-201ENST00000342435 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
PLSCR1-201ENST00000342435 DEKP35659 375 aaKnown RBP16.91■□□□□ 0.3
PLSCR1-201ENST00000342435 CCNB3Q8WWL7 1395 aa16.89■□□□□ 0.29
PLSCR1-201ENST00000342435 MAPKBP1O60336 1514 aa16.89■□□□□ 0.29
PLSCR1-201ENST00000342435 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
PLSCR1-201ENST00000342435 FGD5Q6ZNL6 1462 aa16.88■□□□□ 0.29
PLSCR1-201ENST00000342435 MSH5O43196 834 aa16.88■□□□□ 0.29
PLSCR1-201ENST00000342435 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
PLSCR1-201ENST00000342435 RANGAP1P46060 587 aaPredicted RBP16.85■□□□□ 0.29
PLSCR1-201ENST00000342435 PKNOX2Q96KN3 472 aa16.82■□□□□ 0.28
PLSCR1-201ENST00000342435 KIF21AQ7Z4S6 1674 aa16.82■□□□□ 0.28
PLSCR1-201ENST00000342435 TOPBP1Q92547 1522 aa16.8■□□□□ 0.28
PLSCR1-201ENST00000342435 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
PLSCR1-201ENST00000342435 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
PLSCR1-201ENST00000342435 RAD54L2Q9Y4B4 1467 aa16.79■□□□□ 0.28
PLSCR1-201ENST00000342435 DNMBPQ6XZF7 1577 aa16.79■□□□□ 0.28
PLSCR1-201ENST00000342435 BCANQ96GW7 911 aa16.78■□□□□ 0.28
PLSCR1-201ENST00000342435 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
PLSCR1-201ENST00000342435 CDK11AQ9UQ88 783 aaPredicted RBP16.77■□□□□ 0.28
PLSCR1-201ENST00000342435 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
PLSCR1-201ENST00000342435 SETD5Q9C0A6 1442 aa16.76■□□□□ 0.27
PLSCR1-201ENST00000342435 RAB3GAP2Q9H2M9 1393 aa16.76■□□□□ 0.27
PLSCR1-201ENST00000342435 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
PLSCR1-201ENST00000342435 ANP32CO43423 234 aa16.75■□□□□ 0.27
PLSCR1-201ENST00000342435 CCDC136Q96JN2 1154 aa16.74■□□□□ 0.27
PLSCR1-201ENST00000342435 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
PLSCR1-201ENST00000342435 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
PLSCR1-201ENST00000342435 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
PLSCR1-201ENST00000342435 KANK4Q5T7N3 995 aaPredicted RBP16.68■□□□□ 0.26
PLSCR1-201ENST00000342435 IGF1RP08069 1367 aa16.68■□□□□ 0.26
PLSCR1-201ENST00000342435 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.68■□□□□ 0.26
PLSCR1-201ENST00000342435 DDX10Q13206 875 aaKnown RBP16.66■□□□□ 0.26
PLSCR1-201ENST00000342435 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
PLSCR1-201ENST00000342435 CFAP43Q8NDM7 1665 aa16.65■□□□□ 0.26
PLSCR1-201ENST00000342435 ABCA10Q8WWZ4 1543 aa16.63■□□□□ 0.25
PLSCR1-201ENST00000342435 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
PLSCR1-201ENST00000342435 PPP4R2Q9NY27 417 aa16.61■□□□□ 0.25
PLSCR1-201ENST00000342435 TDRD9Q8NDG6 1382 aaKnown RBP16.61■□□□□ 0.25
PLSCR1-201ENST00000342435 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
PLSCR1-201ENST00000342435 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
PLSCR1-201ENST00000342435 LRRC9Q6ZRR7 1453 aa16.58■□□□□ 0.24
PLSCR1-201ENST00000342435 FHAD1B1AJZ9 1412 aa16.57■□□□□ 0.24
PLSCR1-201ENST00000342435 ITGAEP38570 1179 aa16.55■□□□□ 0.24
PLSCR1-201ENST00000342435 MRC2Q9UBG0 1479 aa16.55■□□□□ 0.24
PLSCR1-201ENST00000342435 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
PLSCR1-201ENST00000342435 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
PLSCR1-201ENST00000342435 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
PLSCR1-201ENST00000342435 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.24
PLSCR1-201ENST00000342435 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
PLSCR1-201ENST00000342435 NOP58Q9Y2X3 529 aaKnown RBP16.49■□□□□ 0.23
PLSCR1-201ENST00000342435 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
PLSCR1-201ENST00000342435 NCOA2Q15596 1464 aa16.47■□□□□ 0.23
PLSCR1-201ENST00000342435 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.233e-7■■■□□ 16
PLSCR1-201ENST00000342435 TONSLQ96HA7 1378 aa16.47■□□□□ 0.23
PLSCR1-201ENST00000342435 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
PLSCR1-201ENST00000342435 CUL7Q14999 1698 aa16.45■□□□□ 0.22
PLSCR1-201ENST00000342435 WDR62O43379 1518 aa16.45■□□□□ 0.22
PLSCR1-201ENST00000342435 ZNF608Q9ULD9 1512 aaPredicted RBP16.44■□□□□ 0.22
PLSCR1-201ENST00000342435 UACAQ9BZF9 1416 aa16.44■□□□□ 0.22
PLSCR1-201ENST00000342435 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
PLSCR1-201ENST00000342435 HNRNPUQ00839 825 aaKnown RBP eCLIP16.43■□□□□ 0.22
PLSCR1-201ENST00000342435 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
PLSCR1-201ENST00000342435 FYCO1Q9BQS8 1478 aa16.42■□□□□ 0.22
PLSCR1-201ENST00000342435 THOC2Q8NI27 1593 aaKnown RBP16.42■□□□□ 0.22
PLSCR1-201ENST00000342435 SIN3AQ96ST3 1273 aa16.41■□□□□ 0.22
PLSCR1-201ENST00000342435 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
PLSCR1-201ENST00000342435 GLIPR1L2Q4G1C9 344 aa16.41■□□□□ 0.22
PLSCR1-201ENST00000342435 EFCAB5A4FU69 1503 aa16.4■□□□□ 0.22
PLSCR1-201ENST00000342435 ZBED9Q6R2W3 1325 aa16.4■□□□□ 0.22
PLSCR1-201ENST00000342435 HFM1A2PYH4 1435 aa16.39■□□□□ 0.21
PLSCR1-201ENST00000342435 CNTLNQ9NXG0 1405 aa16.39■□□□□ 0.21
PLSCR1-201ENST00000342435 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
PLSCR1-201ENST00000342435 PCF11O94913 1555 aaKnown RBP16.38■□□□□ 0.21
PLSCR1-201ENST00000342435 RTL5Q5HYW3 569 aaPredicted RBP16.37■□□□□ 0.21
PLSCR1-201ENST00000342435 CCDC18Q5T9S5 1454 aa16.37■□□□□ 0.21
PLSCR1-201ENST00000342435 KDM5BQ9UGL1 1544 aa16.37■□□□□ 0.21
PLSCR1-201ENST00000342435 CTTNBP2Q8WZ74 1663 aa16.37■□□□□ 0.21
PLSCR1-201ENST00000342435 PTPN23Q9H3S7 1636 aa16.36■□□□□ 0.21
PLSCR1-201ENST00000342435 POLR1AO95602 1720 aaPredicted RBP16.36■□□□□ 0.21
PLSCR1-201ENST00000342435 ANP32AP39687 249 aaKnown RBP16.35■□□□□ 0.21
PLSCR1-201ENST00000342435 IFT140Q96RY7 1462 aa16.34■□□□□ 0.21
PLSCR1-201ENST00000342435 FHOD3Q2V2M9 1422 aa16.33■□□□□ 0.2
PLSCR1-201ENST00000342435 IPO9Q96P70 1041 aaKnown RBP16.33■□□□□ 0.2
PLSCR1-201ENST00000342435 USP35Q9P2H5 1018 aa16.33■□□□□ 0.2
PLSCR1-201ENST00000342435 EIF4G3O43432 1585 aaKnown RBP16.32■□□□□ 0.2
PLSCR1-201ENST00000342435 HECW1Q76N89 1606 aa16.32■□□□□ 0.2
PLSCR1-201ENST00000342435 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
PLSCR1-201ENST00000342435 SMG6Q86US8 1419 aaKnown RBP16.31■□□□□ 0.2
PLSCR1-201ENST00000342435 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
PLSCR1-201ENST00000342435 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
PLSCR1-201ENST00000342435 FGD6Q6ZV73 1430 aa16.3■□□□□ 0.2
PLSCR1-201ENST00000342435 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms