RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 ATP1B4Q9UN42 357 aaPredicted RBP28.92■■■□□ 2.22
CNTNAP3B-202ENST00000341990 FAM50AQ14320 339 aaKnown RBP28.91■■■□□ 2.22
CNTNAP3B-202ENST00000341990 FANCD2Q9BXW9 1451 aa28.89■■■□□ 2.21
CNTNAP3B-202ENST00000341990 SETD5Q9C0A6 1442 aa28.88■■■□□ 2.21
CNTNAP3B-202ENST00000341990 PCF11O94913 1555 aaKnown RBP28.87■■■□□ 2.21
CNTNAP3B-202ENST00000341990 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
CNTNAP3B-202ENST00000341990 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
CNTNAP3B-202ENST00000341990 FHAD1B1AJZ9 1412 aa28.85■■■□□ 2.21
CNTNAP3B-202ENST00000341990 FHOD3Q2V2M9 1422 aa28.84■■■□□ 2.21
CNTNAP3B-202ENST00000341990 SIN3AQ96ST3 1273 aa28.81■■■□□ 2.2
CNTNAP3B-202ENST00000341990 CFAP43Q8NDM7 1665 aa28.79■■■□□ 2.2
CNTNAP3B-202ENST00000341990 KCNH8Q96L42 1107 aa28.77■■■□□ 2.2
CNTNAP3B-202ENST00000341990 POLA1P09884 1462 aaPredicted RBP28.75■■■□□ 2.19
CNTNAP3B-202ENST00000341990 NESP48681 1621 aa28.73■■■□□ 2.19
CNTNAP3B-202ENST00000341990 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
CNTNAP3B-202ENST00000341990 WDR97A6NE52 1622 aa28.72■■■□□ 2.19
CNTNAP3B-202ENST00000341990 ABCA10Q8WWZ4 1543 aa28.72■■■□□ 2.19
CNTNAP3B-202ENST00000341990 TOPBP1Q92547 1522 aa28.71■■■□□ 2.19
CNTNAP3B-202ENST00000341990 SUPT16HQ9Y5B9 1047 aaKnown RBP28.69■■■□□ 2.18
CNTNAP3B-202ENST00000341990 FYCO1Q9BQS8 1478 aa28.66■■■□□ 2.18
CNTNAP3B-202ENST00000341990 CASKIN1Q8WXD9 1431 aa28.64■■■□□ 2.17
CNTNAP3B-202ENST00000341990 DDX10Q13206 875 aaKnown RBP28.61■■■□□ 2.17
CNTNAP3B-202ENST00000341990 EFCAB5A4FU69 1503 aa28.61■■■□□ 2.17
CNTNAP3B-202ENST00000341990 HIRIP3Q9BW71 556 aaPredicted RBP28.58■■■□□ 2.17
CNTNAP3B-202ENST00000341990 CUL7Q14999 1698 aa28.55■■■□□ 2.16
CNTNAP3B-202ENST00000341990 CTTNBP2Q8WZ74 1663 aa28.55■■■□□ 2.16
CNTNAP3B-202ENST00000341990 AQRO60306 1485 aaKnown RBP eCLIP28.55■■■□□ 2.16
CNTNAP3B-202ENST00000341990 FGD6Q6ZV73 1430 aa28.51■■■□□ 2.15
CNTNAP3B-202ENST00000341990 SNAPC4Q5SXM2 1469 aa28.5■■■□□ 2.15
CNTNAP3B-202ENST00000341990 TDRD9Q8NDG6 1382 aaKnown RBP28.5■■■□□ 2.15
CNTNAP3B-202ENST00000341990 FMN1Q68DA7 1419 aa28.49■■■□□ 2.15
CNTNAP3B-202ENST00000341990 URB2Q14146 1524 aaKnown RBP28.48■■■□□ 2.15
CNTNAP3B-202ENST00000341990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.48■■■□□ 2.15
CNTNAP3B-202ENST00000341990 PPP1R15AO75807 674 aaPredicted RBP28.47■■■□□ 2.15
CNTNAP3B-202ENST00000341990 MTUS2Q5JR59 1369 aa28.46■■■□□ 2.15
CNTNAP3B-202ENST00000341990 PTPRKQ15262 1439 aa28.46■■■□□ 2.15
CNTNAP3B-202ENST00000341990 TIMELESSQ9UNS1 1208 aa28.44■■■□□ 2.14
CNTNAP3B-202ENST00000341990 CCDC18Q5T9S5 1454 aa28.4■■■□□ 2.14
CNTNAP3B-202ENST00000341990 LRRIQ1Q96JM4 1722 aa28.4■■■□□ 2.14
CNTNAP3B-202ENST00000341990 SAMD9Q5K651 1589 aa28.35■■■□□ 2.13
CNTNAP3B-202ENST00000341990 ABCA5Q8WWZ7 1642 aa28.35■■■□□ 2.13
CNTNAP3B-202ENST00000341990 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
CNTNAP3B-202ENST00000341990 HFM1A2PYH4 1435 aa28.34■■■□□ 2.13
CNTNAP3B-202ENST00000341990 NCOA2Q15596 1464 aa28.34■■■□□ 2.13
CNTNAP3B-202ENST00000341990 TONSLQ96HA7 1378 aa28.33■■■□□ 2.13
CNTNAP3B-202ENST00000341990 DNAJC5BQ9UF47 199 aa28.32■■■□□ 2.12
CNTNAP3B-202ENST00000341990 PTPN23Q9H3S7 1636 aa28.31■■■□□ 2.12
CNTNAP3B-202ENST00000341990 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
CNTNAP3B-202ENST00000341990 LAMC3Q9Y6N6 1575 aa28.3■■■□□ 2.12
CNTNAP3B-202ENST00000341990 UACAQ9BZF9 1416 aa28.3■■■□□ 2.12
CNTNAP3B-202ENST00000341990 MYOM3Q5VTT5 1437 aa28.29■■■□□ 2.12
CNTNAP3B-202ENST00000341990 NAIPQ13075 1403 aa28.28■■■□□ 2.12
CNTNAP3B-202ENST00000341990 BCANQ96GW7 911 aa28.28■■■□□ 2.12
CNTNAP3B-202ENST00000341990 TSHZ2Q9NRE2 1034 aa28.25■■■□□ 2.11
CNTNAP3B-202ENST00000341990 TRIM52Q96A61 297 aa28.23■■■□□ 2.11
CNTNAP3B-202ENST00000341990 ANP32CO43423 234 aa28.22■■■□□ 2.11
CNTNAP3B-202ENST00000341990 MYT1Q01538 1121 aa28.22■■■□□ 2.11
CNTNAP3B-202ENST00000341990 MAGI3Q5TCQ9 1506 aa28.21■■■□□ 2.11
CNTNAP3B-202ENST00000341990 SUPT6HQ7KZ85 1726 aaKnown RBP28.2■■■□□ 2.11
CNTNAP3B-202ENST00000341990 FKBP8Q14318 412 aa28.2■■■□□ 2.1
CNTNAP3B-202ENST00000341990 RRP7BPQ9NSQ0 103 aa28.19■■■□□ 2.1
CNTNAP3B-202ENST00000341990 CHIC2Q9UKJ5 165 aa28.18■■■□□ 2.1
CNTNAP3B-202ENST00000341990 EHBP1L1Q8N3D4 1523 aa28.18■■■□□ 2.1
CNTNAP3B-202ENST00000341990 CCER2I3L3R5 266 aa28.16■■■□□ 2.1
CNTNAP3B-202ENST00000341990 PDS5BQ9NTI5 1447 aa28.16■■■□□ 2.1
CNTNAP3B-202ENST00000341990 THOC2Q8NI27 1593 aaKnown RBP28.15■■■□□ 2.1
CNTNAP3B-202ENST00000341990 UGGT2Q9NYU1 1516 aa28.15■■■□□ 2.1
CNTNAP3B-202ENST00000341990 KDM5BQ9UGL1 1544 aa28.13■■■□□ 2.09
CNTNAP3B-202ENST00000341990 KIF21AQ7Z4S6 1674 aa28.13■■■□□ 2.09
CNTNAP3B-202ENST00000341990 ARID3CA6NKF2 412 aa28.12■■■□□ 2.09
CNTNAP3B-202ENST00000341990 ARHGEF11O15085 1522 aa28.11■■■□□ 2.09
CNTNAP3B-202ENST00000341990 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
CNTNAP3B-202ENST00000341990 DENND4BO75064 1496 aaPredicted RBP28.05■■■□□ 2.08
CNTNAP3B-202ENST00000341990 KDM6BO15054 1643 aa28.03■■■□□ 2.08
CNTNAP3B-202ENST00000341990 CDK13Q14004 1512 aaKnown RBP28.02■■■□□ 2.08
CNTNAP3B-202ENST00000341990 TCOF1Q13428 1488 aaKnown RBP28■■■□□ 2.07
CNTNAP3B-202ENST00000341990 EPRSP07814 1512 aaKnown RBP28■■■□□ 2.07
CNTNAP3B-202ENST00000341990 HECW1Q76N89 1606 aa27.98■■■□□ 2.07
CNTNAP3B-202ENST00000341990 IQGAP2Q13576 1575 aa27.97■■■□□ 2.07
CNTNAP3B-202ENST00000341990 FOXD1Q16676 465 aa27.96■■■□□ 2.07
CNTNAP3B-202ENST00000341990 NEFLP07196 543 aa27.96■■■□□ 2.07
CNTNAP3B-202ENST00000341990 HSPA5P11021 654 aaKnown RBP27.96■■■□□ 2.07
CNTNAP3B-202ENST00000341990 PBRM1Q86U86 1689 aa27.96■■■□□ 2.07
CNTNAP3B-202ENST00000341990 GCC2Q8IWJ2 1684 aa27.95■■■□□ 2.07
CNTNAP3B-202ENST00000341990 WASHC2AQ641Q2 1341 aa27.95■■■□□ 2.06
CNTNAP3B-202ENST00000341990 MPHOSPH9Q99550 1183 aa27.91■■■□□ 2.06
CNTNAP3B-202ENST00000341990 ADAMTS12P58397 1594 aa27.89■■■□□ 2.06
CNTNAP3B-202ENST00000341990 WDR62O43379 1518 aa27.88■■■□□ 2.05
CNTNAP3B-202ENST00000341990 AKNAQ7Z591 1439 aa27.87■■■□□ 2.05
CNTNAP3B-202ENST00000341990 L3MBTL2Q969R5 705 aa27.86■■■□□ 2.05
CNTNAP3B-202ENST00000341990 HNRNPUQ00839 825 aaKnown RBP eCLIP27.85■■■□□ 2.05
CNTNAP3B-202ENST00000341990 MIA2Q96PC5 1412 aa27.85■■■□□ 2.05
CNTNAP3B-202ENST00000341990 EIF4G2P78344 907 aaKnown RBP eCLIP27.82■■■□□ 2.04
CNTNAP3B-202ENST00000341990 ZNF644Q9H582 1327 aaPredicted RBP27.81■■■□□ 2.04
CNTNAP3B-202ENST00000341990 C11orf95C9JLR9 678 aaPredicted RBP27.79■■■□□ 2.04
CNTNAP3B-202ENST00000341990 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
CNTNAP3B-202ENST00000341990 CCDC184Q52MB2 194 aa27.77■■■□□ 2.04
CNTNAP3B-202ENST00000341990 DAPK1P53355 1430 aa27.75■■■□□ 2.03
CNTNAP3B-202ENST00000341990 IRX6P78412 446 aaPredicted RBP27.73■■■□□ 2.03
CNTNAP3B-202ENST00000341990 NBPF8Q3BBV2 869 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms