RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
LIMK2-203ENST00000340552 VPS8Q8N3P4 1428 aa22.5■■□□□ 1.19
LIMK2-203ENST00000340552 WDR97A6NE52 1622 aa22.48■■□□□ 1.19
LIMK2-203ENST00000340552 PRKCSHP14314 528 aaPredicted RBP22.45■■□□□ 1.18
LIMK2-203ENST00000340552 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
LIMK2-203ENST00000340552 TDRD9Q8NDG6 1382 aaKnown RBP22.41■■□□□ 1.18
LIMK2-203ENST00000340552 ARAP1Q96P48 1450 aa22.39■■□□□ 1.18
LIMK2-203ENST00000340552 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.17
LIMK2-203ENST00000340552 CUL7Q14999 1698 aa22.39■■□□□ 1.17
LIMK2-203ENST00000340552 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
LIMK2-203ENST00000340552 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
LIMK2-203ENST00000340552 ARHGAP35Q9NRY4 1499 aa22.34■■□□□ 1.17
LIMK2-203ENST00000340552 APLP2Q06481 763 aa22.33■■□□□ 1.17
LIMK2-203ENST00000340552 WDR62O43379 1518 aa22.28■■□□□ 1.16
LIMK2-203ENST00000340552 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
LIMK2-203ENST00000340552 CTTNBP2Q8WZ74 1663 aa22.21■■□□□ 1.15
LIMK2-203ENST00000340552 AQRO60306 1485 aaKnown RBP eCLIP22.2■■□□□ 1.143e-8■■■■■ 62
LIMK2-203ENST00000340552 IFT140Q96RY7 1462 aa22.2■■□□□ 1.14
LIMK2-203ENST00000340552 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
LIMK2-203ENST00000340552 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
LIMK2-203ENST00000340552 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
LIMK2-203ENST00000340552 BCANQ96GW7 911 aa22.12■■□□□ 1.13
LIMK2-203ENST00000340552 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
LIMK2-203ENST00000340552 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
LIMK2-203ENST00000340552 RBM19Q9Y4C8 960 aaKnown RBP22.11■■□□□ 1.13
LIMK2-203ENST00000340552 FHAD1B1AJZ9 1412 aa22.1■■□□□ 1.13
LIMK2-203ENST00000340552 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
LIMK2-203ENST00000340552 EFCAB5A4FU69 1503 aa22.1■■□□□ 1.13
LIMK2-203ENST00000340552 KANK4Q5T7N3 995 aaPredicted RBP22.09■■□□□ 1.13
LIMK2-203ENST00000340552 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
LIMK2-203ENST00000340552 FHOD3Q2V2M9 1422 aa22.06■■□□□ 1.12
LIMK2-203ENST00000340552 EIF4G3O43432 1585 aaKnown RBP22.02■■□□□ 1.12
LIMK2-203ENST00000340552 MSH5O43196 834 aa22■■□□□ 1.11
LIMK2-203ENST00000340552 PCF11O94913 1555 aaKnown RBP22■■□□□ 1.11
LIMK2-203ENST00000340552 MAP3K1Q13233 1512 aa21.99■■□□□ 1.11
LIMK2-203ENST00000340552 TIAM1Q13009 1591 aa21.99■■□□□ 1.11
LIMK2-203ENST00000340552 FKBP8Q14318 412 aa21.98■■□□□ 1.11
LIMK2-203ENST00000340552 SAMD9Q5K651 1589 aa21.98■■□□□ 1.11
LIMK2-203ENST00000340552 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
LIMK2-203ENST00000340552 ATP1B4Q9UN42 357 aaPredicted RBP21.94■■□□□ 1.1
LIMK2-203ENST00000340552 FMN1Q68DA7 1419 aa21.94■■□□□ 1.1
LIMK2-203ENST00000340552 FYCO1Q9BQS8 1478 aa21.93■■□□□ 1.1
LIMK2-203ENST00000340552 CASKIN1Q8WXD9 1431 aa21.92■■□□□ 1.1
LIMK2-203ENST00000340552 IQGAP2Q13576 1575 aa21.92■■□□□ 1.1
LIMK2-203ENST00000340552 KCNH8Q96L42 1107 aa21.92■■□□□ 1.1
LIMK2-203ENST00000340552 CFAP43Q8NDM7 1665 aa21.9■■□□□ 1.1
LIMK2-203ENST00000340552 LRRC9Q6ZRR7 1453 aa21.89■■□□□ 1.1
LIMK2-203ENST00000340552 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
LIMK2-203ENST00000340552 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
LIMK2-203ENST00000340552 RRBP1Q9P2E9 1410 aaKnown RBP21.86■■□□□ 1.09
LIMK2-203ENST00000340552 ERICH6Q7L0X2 663 aa21.86■■□□□ 1.09
LIMK2-203ENST00000340552 KIAA0586Q9BVV6 1533 aa21.82■■□□□ 1.08
LIMK2-203ENST00000340552 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
LIMK2-203ENST00000340552 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
LIMK2-203ENST00000340552 ITGAEP38570 1179 aa21.8■■□□□ 1.08
LIMK2-203ENST00000340552 CCNB3Q8WWL7 1395 aa21.8■■□□□ 1.08
LIMK2-203ENST00000340552 UGGT2Q9NYU1 1516 aa21.8■■□□□ 1.08
LIMK2-203ENST00000340552 FBLN2P98095 1184 aa21.76■■□□□ 1.07
LIMK2-203ENST00000340552 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
LIMK2-203ENST00000340552 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
LIMK2-203ENST00000340552 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
LIMK2-203ENST00000340552 FANCIQ9NVI1 1328 aa21.73■■□□□ 1.07
LIMK2-203ENST00000340552 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
LIMK2-203ENST00000340552 NEFLP07196 543 aa21.71■■□□□ 1.07
LIMK2-203ENST00000340552 DISP1Q96F81 1524 aa21.69■■□□□ 1.06
LIMK2-203ENST00000340552 KIAA0556O60303 1618 aa21.69■■□□□ 1.06
LIMK2-203ENST00000340552 MTUS2Q5JR59 1369 aa21.69■■□□□ 1.06
LIMK2-203ENST00000340552 ANO8Q9HCE9 1232 aaPredicted RBP21.68■■□□□ 1.06
LIMK2-203ENST00000340552 DEKP35659 375 aaKnown RBP21.67■■□□□ 1.06
LIMK2-203ENST00000340552 HECW1Q76N89 1606 aa21.67■■□□□ 1.06
LIMK2-203ENST00000340552 NUP160Q12769 1436 aa21.66■■□□□ 1.06
LIMK2-203ENST00000340552 CCDC18Q5T9S5 1454 aa21.65■■□□□ 1.06
LIMK2-203ENST00000340552 MYT1LQ9UL68 1186 aa21.62■■□□□ 1.05
LIMK2-203ENST00000340552 FAM50AQ14320 339 aaKnown RBP21.61■■□□□ 1.05
LIMK2-203ENST00000340552 EPRSP07814 1512 aaKnown RBP21.6■■□□□ 1.05
LIMK2-203ENST00000340552 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
LIMK2-203ENST00000340552 JPH4Q96JJ6 628 aa21.58■■□□□ 1.05
LIMK2-203ENST00000340552 SUPT6HQ7KZ85 1726 aaKnown RBP21.57■■□□□ 1.04
LIMK2-203ENST00000340552 MAGI3Q5TCQ9 1506 aa21.57■■□□□ 1.04
LIMK2-203ENST00000340552 NCOA2Q15596 1464 aa21.56■■□□□ 1.04
LIMK2-203ENST00000340552 CDK13Q14004 1512 aaKnown RBP21.55■■□□□ 1.04
LIMK2-203ENST00000340552 CARMIL2Q6F5E8 1435 aa21.54■■□□□ 1.04
LIMK2-203ENST00000340552 FGD6Q6ZV73 1430 aa21.54■■□□□ 1.04
LIMK2-203ENST00000340552 ARID3CA6NKF2 412 aa21.53■■□□□ 1.04
LIMK2-203ENST00000340552 RAPGEF6Q8TEU7 1601 aa21.53■■□□□ 1.04
LIMK2-203ENST00000340552 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.52■■□□□ 1.04
LIMK2-203ENST00000340552 CHD1O14646 1710 aa21.5■■□□□ 1.03
LIMK2-203ENST00000340552 TRIM52Q96A61 297 aa21.5■■□□□ 1.03
LIMK2-203ENST00000340552 MYOM3Q5VTT5 1437 aa21.5■■□□□ 1.03
LIMK2-203ENST00000340552 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
LIMK2-203ENST00000340552 ARHGEF11O15085 1522 aa21.48■■□□□ 1.03
LIMK2-203ENST00000340552 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
LIMK2-203ENST00000340552 RAB3GAP2Q9H2M9 1393 aa21.45■■□□□ 1.02
LIMK2-203ENST00000340552 DDX10Q13206 875 aaKnown RBP21.45■■□□□ 1.02
LIMK2-203ENST00000340552 SALL2Q9Y467 1007 aaPredicted RBP21.45■■□□□ 1.02
LIMK2-203ENST00000340552 PLB1Q6P1J6 1458 aa21.45■■□□□ 1.02
LIMK2-203ENST00000340552 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
LIMK2-203ENST00000340552 PRG4Q92954 1404 aaPredicted RBP21.39■■□□□ 1.02
LIMK2-203ENST00000340552 PTPN23Q9H3S7 1636 aa21.39■■□□□ 1.02
LIMK2-203ENST00000340552 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms