RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 CUX2O14529 1486 aa17.5■□□□□ 0.39
CCDC144CP-201ENST00000340196 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
CCDC144CP-201ENST00000340196 KCNH8Q96L42 1107 aa17.48■□□□□ 0.39
CCDC144CP-201ENST00000340196 ARAP1Q96P48 1450 aa17.46■□□□□ 0.39
CCDC144CP-201ENST00000340196 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
CCDC144CP-201ENST00000340196 IGF1RP08069 1367 aa17.45■□□□□ 0.38
CCDC144CP-201ENST00000340196 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
CCDC144CP-201ENST00000340196 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
CCDC144CP-201ENST00000340196 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
CCDC144CP-201ENST00000340196 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
CCDC144CP-201ENST00000340196 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
CCDC144CP-201ENST00000340196 WDR62O43379 1518 aa17.35■□□□□ 0.37
CCDC144CP-201ENST00000340196 ABCA5Q8WWZ7 1642 aa17.34■□□□□ 0.37
CCDC144CP-201ENST00000340196 CARMIL1Q5VZK9 1371 aa17.33■□□□□ 0.37
CCDC144CP-201ENST00000340196 BCANQ96GW7 911 aa17.33■□□□□ 0.36
CCDC144CP-201ENST00000340196 HIRIP3Q9BW71 556 aaPredicted RBP17.3■□□□□ 0.36
CCDC144CP-201ENST00000340196 CUL7Q14999 1698 aa17.3■□□□□ 0.36
CCDC144CP-201ENST00000340196 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
CCDC144CP-201ENST00000340196 CLSPNQ9HAW4 1339 aa17.27■□□□□ 0.36
CCDC144CP-201ENST00000340196 RRBP1Q9P2E9 1410 aaKnown RBP17.27■□□□□ 0.35
CCDC144CP-201ENST00000340196 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.35
CCDC144CP-201ENST00000340196 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
CCDC144CP-201ENST00000340196 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
CCDC144CP-201ENST00000340196 ARHGAP35Q9NRY4 1499 aa17.26■□□□□ 0.35
CCDC144CP-201ENST00000340196 ERCC6Q03468 1493 aa17.26■□□□□ 0.35
CCDC144CP-201ENST00000340196 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
CCDC144CP-201ENST00000340196 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
CCDC144CP-201ENST00000340196 P3H3Q8IVL6 736 aa17.24■□□□□ 0.35
CCDC144CP-201ENST00000340196 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
CCDC144CP-201ENST00000340196 IFT140Q96RY7 1462 aa17.22■□□□□ 0.35
CCDC144CP-201ENST00000340196 DDX10Q13206 875 aaKnown RBP17.22■□□□□ 0.35
CCDC144CP-201ENST00000340196 ATP1B4Q9UN42 357 aaPredicted RBP17.22■□□□□ 0.35
CCDC144CP-201ENST00000340196 FAM50AQ14320 339 aaKnown RBP17.2■□□□□ 0.34
CCDC144CP-201ENST00000340196 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
CCDC144CP-201ENST00000340196 PBRM1Q86U86 1689 aa17.17■□□□□ 0.34
CCDC144CP-201ENST00000340196 KCNA4P22459 653 aa17.17■□□□□ 0.34
CCDC144CP-201ENST00000340196 PRKCSHP14314 528 aaPredicted RBP17.15■□□□□ 0.34
CCDC144CP-201ENST00000340196 PHLDB1Q86UU1 1377 aa17.13■□□□□ 0.33
CCDC144CP-201ENST00000340196 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC144CP-201ENST00000340196 CTTNBP2Q8WZ74 1663 aa17.12■□□□□ 0.33
CCDC144CP-201ENST00000340196 GRIN2BQ13224 1484 aa17.12■□□□□ 0.33
CCDC144CP-201ENST00000340196 FKBP8Q14318 412 aa17.12■□□□□ 0.33
CCDC144CP-201ENST00000340196 TRIM52Q96A61 297 aa17.11■□□□□ 0.33
CCDC144CP-201ENST00000340196 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
CCDC144CP-201ENST00000340196 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
CCDC144CP-201ENST00000340196 ADAMTS12P58397 1594 aa17.08■□□□□ 0.33
CCDC144CP-201ENST00000340196 ANP32EQ9BTT0 268 aa17.08■□□□□ 0.33
CCDC144CP-201ENST00000340196 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
CCDC144CP-201ENST00000340196 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
CCDC144CP-201ENST00000340196 SETD5Q9C0A6 1442 aa17.05■□□□□ 0.32
CCDC144CP-201ENST00000340196 TIAM1Q13009 1591 aa17.04■□□□□ 0.32
CCDC144CP-201ENST00000340196 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
CCDC144CP-201ENST00000340196 ADRA2BP18089 450 aa17.03■□□□□ 0.32
CCDC144CP-201ENST00000340196 LRRC9Q6ZRR7 1453 aa17.01■□□□□ 0.31
CCDC144CP-201ENST00000340196 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
CCDC144CP-201ENST00000340196 FHOD3Q2V2M9 1422 aa16.98■□□□□ 0.31
CCDC144CP-201ENST00000340196 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
CCDC144CP-201ENST00000340196 SAMD9Q5K651 1589 aa16.97■□□□□ 0.31
CCDC144CP-201ENST00000340196 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
CCDC144CP-201ENST00000340196 PCF11O94913 1555 aaKnown RBP16.94■□□□□ 0.3
CCDC144CP-201ENST00000340196 MAP3K1Q13233 1512 aa16.94■□□□□ 0.3
CCDC144CP-201ENST00000340196 IRX6P78412 446 aaPredicted RBP16.92■□□□□ 0.3
CCDC144CP-201ENST00000340196 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
CCDC144CP-201ENST00000340196 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
CCDC144CP-201ENST00000340196 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
CCDC144CP-201ENST00000340196 ANP32CO43423 234 aa16.88■□□□□ 0.29
CCDC144CP-201ENST00000340196 KIAA0586Q9BVV6 1533 aa16.88■□□□□ 0.29
CCDC144CP-201ENST00000340196 FMN1Q68DA7 1419 aa16.87■□□□□ 0.29
CCDC144CP-201ENST00000340196 UGGT2Q9NYU1 1516 aa16.86■□□□□ 0.29
CCDC144CP-201ENST00000340196 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
CCDC144CP-201ENST00000340196 CASKIN1Q8WXD9 1431 aa16.86■□□□□ 0.29
CCDC144CP-201ENST00000340196 FYCO1Q9BQS8 1478 aa16.86■□□□□ 0.29
CCDC144CP-201ENST00000340196 NEFLP07196 543 aa16.85■□□□□ 0.29
CCDC144CP-201ENST00000340196 PTPRKQ15262 1439 aa16.83■□□□□ 0.28
CCDC144CP-201ENST00000340196 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
CCDC144CP-201ENST00000340196 CFAP43Q8NDM7 1665 aa16.82■□□□□ 0.28
CCDC144CP-201ENST00000340196 NUP160Q12769 1436 aa16.81■□□□□ 0.28
CCDC144CP-201ENST00000340196 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
CCDC144CP-201ENST00000340196 CEP170Q5SW79 1584 aa16.8■□□□□ 0.28
CCDC144CP-201ENST00000340196 HNRNPUQ00839 825 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC144CP-201ENST00000340196 CHIC2Q9UKJ5 165 aa16.78■□□□□ 0.28
CCDC144CP-201ENST00000340196 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.27
CCDC144CP-201ENST00000340196 ARID3CA6NKF2 412 aa16.76■□□□□ 0.27
CCDC144CP-201ENST00000340196 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
CCDC144CP-201ENST00000340196 FGD6Q6ZV73 1430 aa16.75■□□□□ 0.27
CCDC144CP-201ENST00000340196 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
CCDC144CP-201ENST00000340196 RRP7BPQ9NSQ0 103 aa16.75■□□□□ 0.27
CCDC144CP-201ENST00000340196 CCDC184Q52MB2 194 aa16.75■□□□□ 0.27
CCDC144CP-201ENST00000340196 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
CCDC144CP-201ENST00000340196 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
CCDC144CP-201ENST00000340196 MSH5O43196 834 aa16.74■□□□□ 0.27
CCDC144CP-201ENST00000340196 LRRIQ1Q96JM4 1722 aa16.73■□□□□ 0.27
CCDC144CP-201ENST00000340196 FOXD1Q16676 465 aa16.72■□□□□ 0.27
CCDC144CP-201ENST00000340196 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.27
CCDC144CP-201ENST00000340196 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
CCDC144CP-201ENST00000340196 FBLN2P98095 1184 aa16.7■□□□□ 0.26
CCDC144CP-201ENST00000340196 WASHC2AQ641Q2 1341 aa16.69■□□□□ 0.26
CCDC144CP-201ENST00000340196 SENP3-EIF4A1A0A087X0R7 540 aa16.68■□□□□ 0.26
CCDC144CP-201ENST00000340196 HSPA5P11021 654 aaKnown RBP16.68■□□□□ 0.26
CCDC144CP-201ENST00000340196 CHD1O14646 1710 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms