RNA–Protein interactions for RNA: ENST00000338969.9

TRIM9-202, Transcript of tripartite motif containing 9, humanhuman

TSL 2 BASIC

Gene TRIM9, Length 3,312 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-202ENST00000338969 KCNH8Q96L42 1107 aa23.79■■□□□ 1.4
TRIM9-202ENST00000338969 RAB3GAP2Q9H2M9 1393 aa23.77■■□□□ 1.4
TRIM9-202ENST00000338969 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
TRIM9-202ENST00000338969 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
TRIM9-202ENST00000338969 DDX10Q13206 875 aaKnown RBP23.72■■□□□ 1.39
TRIM9-202ENST00000338969 CLSPNQ9HAW4 1339 aa23.71■■□□□ 1.39
TRIM9-202ENST00000338969 RRBP1Q9P2E9 1410 aaKnown RBP23.7■■□□□ 1.39
TRIM9-202ENST00000338969 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
TRIM9-202ENST00000338969 FHOD3Q2V2M9 1422 aa23.66■■□□□ 1.38
TRIM9-202ENST00000338969 BCANQ96GW7 911 aa23.66■■□□□ 1.38
TRIM9-202ENST00000338969 SETD5Q9C0A6 1442 aa23.56■■□□□ 1.36
TRIM9-202ENST00000338969 SUPT16HQ9Y5B9 1047 aaKnown RBP23.54■■□□□ 1.36
TRIM9-202ENST00000338969 POLA1P09884 1462 aaPredicted RBP23.51■■□□□ 1.35
TRIM9-202ENST00000338969 LRRC9Q6ZRR7 1453 aa23.51■■□□□ 1.35
TRIM9-202ENST00000338969 TIAM1Q13009 1591 aa23.49■■□□□ 1.35
TRIM9-202ENST00000338969 CHIC2Q9UKJ5 165 aa23.48■■□□□ 1.35
TRIM9-202ENST00000338969 TOPBP1Q92547 1522 aa23.48■■□□□ 1.35
TRIM9-202ENST00000338969 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
TRIM9-202ENST00000338969 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
TRIM9-202ENST00000338969 MTUS2Q5JR59 1369 aa23.43■■□□□ 1.34
TRIM9-202ENST00000338969 MAPKBP1O60336 1514 aa23.42■■□□□ 1.34
TRIM9-202ENST00000338969 FBLN2P98095 1184 aa23.41■■□□□ 1.34
TRIM9-202ENST00000338969 RRP7BPQ9NSQ0 103 aa23.4■■□□□ 1.34
TRIM9-202ENST00000338969 PCF11O94913 1555 aaKnown RBP23.39■■□□□ 1.33
TRIM9-202ENST00000338969 WDR97A6NE52 1622 aa23.38■■□□□ 1.33
TRIM9-202ENST00000338969 FKBP8Q14318 412 aa23.35■■□□□ 1.33
TRIM9-202ENST00000338969 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
TRIM9-202ENST00000338969 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.33
TRIM9-202ENST00000338969 DNMBPQ6XZF7 1577 aa23.32■■□□□ 1.32
TRIM9-202ENST00000338969 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
TRIM9-202ENST00000338969 CNGB1Q14028 1251 aaPredicted RBP23.31■■□□□ 1.32
TRIM9-202ENST00000338969 PDS5BQ9NTI5 1447 aa23.31■■□□□ 1.32
TRIM9-202ENST00000338969 ANP32CO43423 234 aa23.3■■□□□ 1.32
TRIM9-202ENST00000338969 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
TRIM9-202ENST00000338969 GAPVD1Q14C86 1478 aa23.27■■□□□ 1.32
TRIM9-202ENST00000338969 AQRO60306 1485 aaKnown RBP eCLIP23.27■■□□□ 1.32
TRIM9-202ENST00000338969 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
TRIM9-202ENST00000338969 FOXD1Q16676 465 aa23.23■■□□□ 1.31
TRIM9-202ENST00000338969 FGD6Q6ZV73 1430 aa23.2■■□□□ 1.31
TRIM9-202ENST00000338969 CASKIN1Q8WXD9 1431 aa23.2■■□□□ 1.3
TRIM9-202ENST00000338969 NEFLP07196 543 aa23.2■■□□□ 1.3
TRIM9-202ENST00000338969 PTPRKQ15262 1439 aa23.18■■□□□ 1.3
TRIM9-202ENST00000338969 TSHZ2Q9NRE2 1034 aa23.16■■□□□ 1.3
TRIM9-202ENST00000338969 MAP3K1Q13233 1512 aa23.16■■□□□ 1.3
TRIM9-202ENST00000338969 FMN1Q68DA7 1419 aa23.16■■□□□ 1.3
TRIM9-202ENST00000338969 IRX6P78412 446 aaPredicted RBP23.15■■□□□ 1.3
TRIM9-202ENST00000338969 CCDC18Q5T9S5 1454 aa23.15■■□□□ 1.3
TRIM9-202ENST00000338969 FYCO1Q9BQS8 1478 aa23.15■■□□□ 1.3
TRIM9-202ENST00000338969 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
TRIM9-202ENST00000338969 POLR3GLQ9BT43 218 aa23.1■■□□□ 1.29
TRIM9-202ENST00000338969 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
TRIM9-202ENST00000338969 LAMC3Q9Y6N6 1575 aa23.08■■□□□ 1.29
TRIM9-202ENST00000338969 NCOA2Q15596 1464 aa23.08■■□□□ 1.28
TRIM9-202ENST00000338969 CFAP43Q8NDM7 1665 aa23.06■■□□□ 1.28
TRIM9-202ENST00000338969 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
TRIM9-202ENST00000338969 TIMELESSQ9UNS1 1208 aa23.04■■□□□ 1.28
TRIM9-202ENST00000338969 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
TRIM9-202ENST00000338969 HSPA5P11021 654 aaKnown RBP23.03■■□□□ 1.28
TRIM9-202ENST00000338969 ZNF326Q5BKZ1 582 aaKnown RBP23.03■■□□□ 1.28
TRIM9-202ENST00000338969 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
TRIM9-202ENST00000338969 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
TRIM9-202ENST00000338969 MYOM3Q5VTT5 1437 aa23.01■■□□□ 1.27
TRIM9-202ENST00000338969 NAIPQ13075 1403 aa23■■□□□ 1.27
TRIM9-202ENST00000338969 SNAPC4Q5SXM2 1469 aa23■■□□□ 1.27
TRIM9-202ENST00000338969 ZNF608Q9ULD9 1512 aaPredicted RBP22.98■■□□□ 1.27
TRIM9-202ENST00000338969 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
TRIM9-202ENST00000338969 ZNF644Q9H582 1327 aaPredicted RBP22.98■■□□□ 1.27
TRIM9-202ENST00000338969 CUL7Q14999 1698 aa22.97■■□□□ 1.27
TRIM9-202ENST00000338969 HFM1A2PYH4 1435 aa22.96■■□□□ 1.27
TRIM9-202ENST00000338969 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
TRIM9-202ENST00000338969 FAM9BQ8IZU0 186 aa22.95■■□□□ 1.26
TRIM9-202ENST00000338969 L3MBTL2Q969R5 705 aa22.95■■□□□ 1.26
TRIM9-202ENST00000338969 CCER2I3L3R5 266 aa22.94■■□□□ 1.26
TRIM9-202ENST00000338969 MPHOSPH9Q99550 1183 aa22.94■■□□□ 1.26
TRIM9-202ENST00000338969 CTTNBP2Q8WZ74 1663 aa22.91■■□□□ 1.26
TRIM9-202ENST00000338969 EIF4G2P78344 907 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRIM9-202ENST00000338969 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
TRIM9-202ENST00000338969 CDK13Q14004 1512 aaKnown RBP22.9■■□□□ 1.26
TRIM9-202ENST00000338969 WASHC2AQ641Q2 1341 aa22.89■■□□□ 1.26
TRIM9-202ENST00000338969 PTPN23Q9H3S7 1636 aa22.89■■□□□ 1.25
TRIM9-202ENST00000338969 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.88■■□□□ 1.25
TRIM9-202ENST00000338969 SLC4A1APQ9BWU0 796 aaKnown RBP22.88■■□□□ 1.25
TRIM9-202ENST00000338969 GRIN2BQ13224 1484 aa22.87■■□□□ 1.25
TRIM9-202ENST00000338969 MYT1Q01538 1121 aa22.87■■□□□ 1.25
TRIM9-202ENST00000338969 MAGI3Q5TCQ9 1506 aa22.85■■□□□ 1.25
TRIM9-202ENST00000338969 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
TRIM9-202ENST00000338969 C11orf95C9JLR9 678 aaPredicted RBP22.84■■□□□ 1.25
TRIM9-202ENST00000338969 MRC2Q9UBG0 1479 aa22.82■■□□□ 1.24
TRIM9-202ENST00000338969 CDK11AQ9UQ88 783 aaPredicted RBP22.82■■□□□ 1.24
TRIM9-202ENST00000338969 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
TRIM9-202ENST00000338969 CFDP1Q9UEE9 299 aaPredicted RBP22.8■■□□□ 1.24
TRIM9-202ENST00000338969 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
TRIM9-202ENST00000338969 SUPT6HQ7KZ85 1726 aaKnown RBP22.78■■□□□ 1.24
TRIM9-202ENST00000338969 EHBP1L1Q8N3D4 1523 aa22.78■■□□□ 1.24
TRIM9-202ENST00000338969 LRRIQ1Q96JM4 1722 aa22.77■■□□□ 1.24
TRIM9-202ENST00000338969 TARBP1Q13395 1621 aaKnown RBP22.75■■□□□ 1.23
TRIM9-202ENST00000338969 RBM19Q9Y4C8 960 aaKnown RBP22.75■■□□□ 1.23
TRIM9-202ENST00000338969 EPRSP07814 1512 aaKnown RBP22.75■■□□□ 1.23
TRIM9-202ENST00000338969 JPH4Q96JJ6 628 aa22.74■■□□□ 1.23
TRIM9-202ENST00000338969 SAMD9Q5K651 1589 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms