RNA–Protein interactions for RNA: ENST00000335698.4

ATP5C1-201, Transcript of ATP synthase subunit gamma, mitochondrial, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP5C1, Length 1,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP5C1-201ENST00000335698 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
ATP5C1-201ENST00000335698 C19orf67A6NJJ6 358 aa24.29■■□□□ 1.48
ATP5C1-201ENST00000335698 PRR29P0C7W0 189 aa24.28■■□□□ 1.48
ATP5C1-201ENST00000335698 CCDC88BA6NC98 1476 aa24.27■■□□□ 1.48
ATP5C1-201ENST00000335698 CHADLQ6NUI6 762 aa24.27■■□□□ 1.48
ATP5C1-201ENST00000335698 NESP48681 1621 aa24.21■■□□□ 1.47
ATP5C1-201ENST00000335698 CADPSQ9ULU8 1353 aa24.18■■□□□ 1.46
ATP5C1-201ENST00000335698 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
ATP5C1-201ENST00000335698 CFTRP13569 1480 aa24.07■■□□□ 1.44
ATP5C1-201ENST00000335698 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
ATP5C1-201ENST00000335698 ERCC6Q03468 1493 aa23.99■■□□□ 1.43
ATP5C1-201ENST00000335698 GABBR2O75899 941 aa23.94■■□□□ 1.42
ATP5C1-201ENST00000335698 FARP1Q9Y4F1 1045 aaPredicted RBP23.91■■□□□ 1.42
ATP5C1-201ENST00000335698 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
ATP5C1-201ENST00000335698 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
ATP5C1-201ENST00000335698 PRDM2Q13029 1718 aa23.81■■□□□ 1.4
ATP5C1-201ENST00000335698 CEP164Q9UPV0 1460 aa23.81■■□□□ 1.4
ATP5C1-201ENST00000335698 SPDYE4A6NLX3 237 aa23.81■■□□□ 1.4
ATP5C1-201ENST00000335698 CD44P16070 742 aaKnown RBP23.81■■□□□ 1.4
ATP5C1-201ENST00000335698 STAG3Q9UJ98 1225 aa23.75■■□□□ 1.39
ATP5C1-201ENST00000335698 MRC2Q9UBG0 1479 aa23.71■■□□□ 1.39
ATP5C1-201ENST00000335698 THOC2Q8NI27 1593 aaKnown RBP23.7■■□□□ 1.38
ATP5C1-201ENST00000335698 CREBZFQ9NS37 354 aa23.69■■□□□ 1.38
ATP5C1-201ENST00000335698 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.37
ATP5C1-201ENST00000335698 WDR62O43379 1518 aa23.59■■□□□ 1.37
ATP5C1-201ENST00000335698 CUX2O14529 1486 aa23.59■■□□□ 1.37
ATP5C1-201ENST00000335698 ABCC8Q09428 1581 aa23.53■■□□□ 1.36
ATP5C1-201ENST00000335698 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
ATP5C1-201ENST00000335698 CLCN6P51797 869 aa23.51■■□□□ 1.35
ATP5C1-201ENST00000335698 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
ATP5C1-201ENST00000335698 POTEIP0CG38 1075 aa23.46■■□□□ 1.35
ATP5C1-201ENST00000335698 CUX1P39880 1505 aa23.46■■□□□ 1.35
ATP5C1-201ENST00000335698 ZNF579Q8NAF0 562 aaKnown RBP23.46■■□□□ 1.35
ATP5C1-201ENST00000335698 ZRANB1Q9UGI0 708 aa23.43■■□□□ 1.34
ATP5C1-201ENST00000335698 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
ATP5C1-201ENST00000335698 LHX8Q68G74 356 aa23.41■■□□□ 1.34
ATP5C1-201ENST00000335698 POLA1P09884 1462 aaPredicted RBP23.35■■□□□ 1.33
ATP5C1-201ENST00000335698 FGD5Q6ZNL6 1462 aa23.34■■□□□ 1.33
ATP5C1-201ENST00000335698 SYNJ1O43426 1573 aa23.33■■□□□ 1.33
ATP5C1-201ENST00000335698 TOP2BQ02880 1626 aa23.31■■□□□ 1.32
ATP5C1-201ENST00000335698 SOGA1O94964 1423 aa23.31■■□□□ 1.32
ATP5C1-201ENST00000335698 IFT140Q96RY7 1462 aa23.3■■□□□ 1.32
ATP5C1-201ENST00000335698 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
ATP5C1-201ENST00000335698 MNX1P50219 401 aaPredicted RBP23.29■■□□□ 1.32
ATP5C1-201ENST00000335698 PROM2Q8N271 834 aa23.29■■□□□ 1.32
ATP5C1-201ENST00000335698 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
ATP5C1-201ENST00000335698 TARBP1Q13395 1621 aaKnown RBP23.23■■□□□ 1.31
ATP5C1-201ENST00000335698 DCBLD2Q96PD2 775 aa23.23■■□□□ 1.31
ATP5C1-201ENST00000335698 ZNF608Q9ULD9 1512 aaPredicted RBP23.2■■□□□ 1.3
ATP5C1-201ENST00000335698 NPM1P06748 294 aaKnown RBP eCLIP23.2■■□□□ 1.3
ATP5C1-201ENST00000335698 PAK3O75914 559 aaPredicted RBP23.18■■□□□ 1.3
ATP5C1-201ENST00000335698 GALR2O43603 387 aaPredicted RBP23.17■■□□□ 1.3
ATP5C1-201ENST00000335698 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
ATP5C1-201ENST00000335698 TRIM41Q8WV44 630 aa23.16■■□□□ 1.3
ATP5C1-201ENST00000335698 AQRO60306 1485 aaKnown RBP eCLIP23.14■■□□□ 1.293e-7■■■■■ 28
ATP5C1-201ENST00000335698 PHF12Q96QT6 1004 aa23.11■■□□□ 1.29
ATP5C1-201ENST00000335698 ABCA10Q8WWZ4 1543 aa23.11■■□□□ 1.29
ATP5C1-201ENST00000335698 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
ATP5C1-201ENST00000335698 EIF4G3O43432 1585 aaKnown RBP23.06■■□□□ 1.28
ATP5C1-201ENST00000335698 GAPVD1Q14C86 1478 aa23.01■■□□□ 1.27
ATP5C1-201ENST00000335698 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
ATP5C1-201ENST00000335698 ABCA5Q8WWZ7 1642 aa22.96■■□□□ 1.27
ATP5C1-201ENST00000335698 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
ATP5C1-201ENST00000335698 SNAPC4Q5SXM2 1469 aa22.89■■□□□ 1.25
ATP5C1-201ENST00000335698 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
ATP5C1-201ENST00000335698 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
ATP5C1-201ENST00000335698 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
ATP5C1-201ENST00000335698 IGF1RP08069 1367 aa22.83■■□□□ 1.25
ATP5C1-201ENST00000335698 ERICH3Q5RHP9 1530 aa22.82■■□□□ 1.24
ATP5C1-201ENST00000335698 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
ATP5C1-201ENST00000335698 MS4A3Q96HJ5 214 aa22.81■■□□□ 1.24
ATP5C1-201ENST00000335698 TSPYL2Q9H2G4 693 aaPredicted RBP22.78■■□□□ 1.24
ATP5C1-201ENST00000335698 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
ATP5C1-201ENST00000335698 FHAD1B1AJZ9 1412 aa22.75■■□□□ 1.23
ATP5C1-201ENST00000335698 CCDC61Q9Y6R9 512 aa22.75■■□□□ 1.23
ATP5C1-201ENST00000335698 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
ATP5C1-201ENST00000335698 CHD1O14646 1710 aa22.73■■□□□ 1.23
ATP5C1-201ENST00000335698 FAM9AQ8IZU1 332 aaPredicted RBP22.72■■□□□ 1.23
ATP5C1-201ENST00000335698 ADAMTS12P58397 1594 aa22.72■■□□□ 1.23
ATP5C1-201ENST00000335698 CARMIL1Q5VZK9 1371 aa22.7■■□□□ 1.22
ATP5C1-201ENST00000335698 POTEB2H3BUK9 544 aa22.69■■□□□ 1.22
ATP5C1-201ENST00000335698 ASTLQ6HA08 431 aaPredicted RBP22.69■■□□□ 1.22
ATP5C1-201ENST00000335698 MIER1Q8N108 512 aa22.69■■□□□ 1.22
ATP5C1-201ENST00000335698 PLEKHG5O94827 1062 aa22.68■■□□□ 1.22
ATP5C1-201ENST00000335698 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
ATP5C1-201ENST00000335698 EEA1Q15075 1411 aa22.65■■□□□ 1.22
ATP5C1-201ENST00000335698 CUL7Q14999 1698 aa22.65■■□□□ 1.22
ATP5C1-201ENST00000335698 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.21
ATP5C1-201ENST00000335698 ATMINO43313 823 aaPredicted RBP22.63■■□□□ 1.21
ATP5C1-201ENST00000335698 OTUD5Q96G74 571 aa22.62■■□□□ 1.21
ATP5C1-201ENST00000335698 KIF12Q96FN5 646 aa22.59■■□□□ 1.21
ATP5C1-201ENST00000335698 RASEFQ8IZ41 740 aa22.57■■□□□ 1.2
ATP5C1-201ENST00000335698 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
ATP5C1-201ENST00000335698 METRNQ9UJH8 293 aa22.54■■□□□ 1.2
ATP5C1-201ENST00000335698 PRXQ9BXM0 1461 aa22.54■■□□□ 1.2
ATP5C1-201ENST00000335698 NUP160Q12769 1436 aa22.53■■□□□ 1.2
ATP5C1-201ENST00000335698 CEP170Q5SW79 1584 aa22.52■■□□□ 1.2
ATP5C1-201ENST00000335698 SLC39A7Q92504 469 aa22.52■■□□□ 1.2
ATP5C1-201ENST00000335698 PLCD3Q8N3E9 789 aa22.5■■□□□ 1.19
ATP5C1-201ENST00000335698 C7P10643 843 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms