RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 GOLGA3Q08378 1498 aa15.82■□□□□ 0.12
CCDC87-201ENST00000333861 CNGB1Q14028 1251 aaPredicted RBP15.81■□□□□ 0.12
CCDC87-201ENST00000333861 EEA1Q15075 1411 aa15.81■□□□□ 0.12
CCDC87-201ENST00000333861 NEFLP07196 543 aa15.81■□□□□ 0.12
CCDC87-201ENST00000333861 ANO8Q9HCE9 1232 aaPredicted RBP15.79■□□□□ 0.12
CCDC87-201ENST00000333861 BIVM-ERCC5R4GMW8 1640 aa15.77■□□□□ 0.12
CCDC87-201ENST00000333861 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.12
CCDC87-201ENST00000333861 ATP1B4Q9UN42 357 aaPredicted RBP15.77■□□□□ 0.12
CCDC87-201ENST00000333861 RAPGEF2Q9Y4G8 1499 aa15.77■□□□□ 0.11
CCDC87-201ENST00000333861 KIF21AQ7Z4S6 1674 aa15.76■□□□□ 0.11
CCDC87-201ENST00000333861 ERCC6Q03468 1493 aa15.75■□□□□ 0.11
CCDC87-201ENST00000333861 URB2Q14146 1524 aaKnown RBP15.75■□□□□ 0.11
CCDC87-201ENST00000333861 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
CCDC87-201ENST00000333861 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
CCDC87-201ENST00000333861 DEKP35659 375 aaKnown RBP15.71■□□□□ 0.11
CCDC87-201ENST00000333861 CUX2O14529 1486 aa15.71■□□□□ 0.11
CCDC87-201ENST00000333861 VPS8Q8N3P4 1428 aa15.71■□□□□ 0.11
CCDC87-201ENST00000333861 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
CCDC87-201ENST00000333861 NBR1Q14596 966 aa15.7■□□□□ 0.1
CCDC87-201ENST00000333861 POLA1P09884 1462 aaPredicted RBP15.69■□□□□ 0.1
CCDC87-201ENST00000333861 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
CCDC87-201ENST00000333861 FAM50AQ14320 339 aaKnown RBP15.67■□□□□ 0.1
CCDC87-201ENST00000333861 P3H3Q8IVL6 736 aa15.67■□□□□ 0.1
CCDC87-201ENST00000333861 CCDC136Q96JN2 1154 aa15.66■□□□□ 0.1
CCDC87-201ENST00000333861 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
CCDC87-201ENST00000333861 MRC2Q9UBG0 1479 aa15.63■□□□□ 0.09
CCDC87-201ENST00000333861 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
CCDC87-201ENST00000333861 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
CCDC87-201ENST00000333861 KIF21BO75037 1637 aa15.61■□□□□ 0.09
CCDC87-201ENST00000333861 RTN4Q9NQC3 1192 aaKnown RBP15.61■□□□□ 0.09
CCDC87-201ENST00000333861 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
CCDC87-201ENST00000333861 IGF1RP08069 1367 aa15.58■□□□□ 0.08
CCDC87-201ENST00000333861 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
CCDC87-201ENST00000333861 B4GALNT3Q6L9W6 998 aa15.57■□□□□ 0.08
CCDC87-201ENST00000333861 ANP32CO43423 234 aa15.56■□□□□ 0.08
CCDC87-201ENST00000333861 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
CCDC87-201ENST00000333861 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
CCDC87-201ENST00000333861 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
CCDC87-201ENST00000333861 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
CCDC87-201ENST00000333861 CCDC184Q52MB2 194 aa15.53■□□□□ 0.08
CCDC87-201ENST00000333861 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.53■□□□□ 0.08
CCDC87-201ENST00000333861 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.08
CCDC87-201ENST00000333861 AQRO60306 1485 aaKnown RBP eCLIP15.52■□□□□ 0.07
CCDC87-201ENST00000333861 PAK3O75914 559 aaPredicted RBP15.51■□□□□ 0.07
CCDC87-201ENST00000333861 PRXQ9BXM0 1461 aa15.51■□□□□ 0.07
CCDC87-201ENST00000333861 GAPVD1Q14C86 1478 aa15.48■□□□□ 0.07
CCDC87-201ENST00000333861 WDR62O43379 1518 aa15.48■□□□□ 0.07
CCDC87-201ENST00000333861 CCNB3Q8WWL7 1395 aa15.48■□□□□ 0.07
CCDC87-201ENST00000333861 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
CCDC87-201ENST00000333861 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
CCDC87-201ENST00000333861 ARAP1Q96P48 1450 aa15.48■□□□□ 0.07
CCDC87-201ENST00000333861 ZNF608Q9ULD9 1512 aaPredicted RBP15.48■□□□□ 0.07
CCDC87-201ENST00000333861 THOC2Q8NI27 1593 aaKnown RBP15.45■□□□□ 0.06
CCDC87-201ENST00000333861 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
CCDC87-201ENST00000333861 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
CCDC87-201ENST00000333861 IFT140Q96RY7 1462 aa15.42■□□□□ 0.06
CCDC87-201ENST00000333861 FBLN2P98095 1184 aa15.41■□□□□ 0.06
CCDC87-201ENST00000333861 ERICH3Q5RHP9 1530 aa15.39■□□□□ 0.05
CCDC87-201ENST00000333861 POLR3GLQ9BT43 218 aa15.39■□□□□ 0.05
CCDC87-201ENST00000333861 NOP58Q9Y2X3 529 aaKnown RBP15.38■□□□□ 0.05
CCDC87-201ENST00000333861 ABCA5Q8WWZ7 1642 aa15.37■□□□□ 0.05
CCDC87-201ENST00000333861 NPM2Q86SE8 214 aaKnown RBP15.34■□□□□ 0.05
CCDC87-201ENST00000333861 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
CCDC87-201ENST00000333861 PHLDB1Q86UU1 1377 aa15.33■□□□□ 0.04
CCDC87-201ENST00000333861 FOXD1Q16676 465 aa15.32■□□□□ 0.04
CCDC87-201ENST00000333861 CCER2I3L3R5 266 aa15.32■□□□□ 0.04
CCDC87-201ENST00000333861 RRBP1Q9P2E9 1410 aaKnown RBP15.32■□□□□ 0.04
CCDC87-201ENST00000333861 ARID3CA6NKF2 412 aa15.31■□□□□ 0.04
CCDC87-201ENST00000333861 CHIC2Q9UKJ5 165 aa15.31■□□□□ 0.04
CCDC87-201ENST00000333861 SETD5Q9C0A6 1442 aa15.31■□□□□ 0.04
CCDC87-201ENST00000333861 CHMP7Q8WUX9 453 aaPredicted RBP15.3■□□□□ 0.04
CCDC87-201ENST00000333861 EIF4G3O43432 1585 aaKnown RBP15.3■□□□□ 0.04
CCDC87-201ENST00000333861 SNAPC4Q5SXM2 1469 aa15.29■□□□□ 0.04
CCDC87-201ENST00000333861 CUL7Q14999 1698 aa15.28■□□□□ 0.04
CCDC87-201ENST00000333861 RTL5Q5HYW3 569 aaPredicted RBP15.28■□□□□ 0.04
CCDC87-201ENST00000333861 PPP4R2Q9NY27 417 aa15.28■□□□□ 0.04
CCDC87-201ENST00000333861 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
CCDC87-201ENST00000333861 PBRM1Q86U86 1689 aa15.27■□□□□ 0.03
CCDC87-201ENST00000333861 MYT1LQ9UL68 1186 aa15.27■□□□□ 0.03
CCDC87-201ENST00000333861 FHAD1B1AJZ9 1412 aa15.27■□□□□ 0.03
CCDC87-201ENST00000333861 C11orf95C9JLR9 678 aaPredicted RBP15.25■□□□□ 0.03
CCDC87-201ENST00000333861 LAS1LQ9Y4W2 734 aaKnown RBP15.25■□□□□ 0.03
CCDC87-201ENST00000333861 ARHGAP35Q9NRY4 1499 aa15.25■□□□□ 0.03
CCDC87-201ENST00000333861 HSPA5P11021 654 aaKnown RBP15.24■□□□□ 0.03
CCDC87-201ENST00000333861 SKAP1Q86WV1 359 aa15.24■□□□□ 0.03
CCDC87-201ENST00000333861 MRS2Q9HD23 443 aa15.23■□□□□ 0.03
CCDC87-201ENST00000333861 RRP7BPQ9NSQ0 103 aa15.23■□□□□ 0.03
CCDC87-201ENST00000333861 WASHC2AQ641Q2 1341 aa15.22■□□□□ 0.03
CCDC87-201ENST00000333861 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
CCDC87-201ENST00000333861 ADAMTS12P58397 1594 aa15.21■□□□□ 0.03
CCDC87-201ENST00000333861 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
CCDC87-201ENST00000333861 FHOD3Q2V2M9 1422 aa15.18■□□□□ 0.02
CCDC87-201ENST00000333861 AKNAQ7Z591 1439 aa15.16■□□□□ 0.02
CCDC87-201ENST00000333861 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
CCDC87-201ENST00000333861 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
CCDC87-201ENST00000333861 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
CCDC87-201ENST00000333861 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
CCDC87-201ENST00000333861 IPO9Q96P70 1041 aaKnown RBP15.14■□□□□ 0.01
CCDC87-201ENST00000333861 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
CCDC87-201ENST00000333861 ERICH6BQ5W0A0 696 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms