RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
NPIPA1-201ENST00000328085 DMRT2Q9Y5R5 561 aa13.4□□□□□ -0.26
NPIPA1-201ENST00000328085 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
NPIPA1-201ENST00000328085 WIZO95785 1651 aa13.37□□□□□ -0.27
NPIPA1-201ENST00000328085 CHD1O14646 1710 aa13.36□□□□□ -0.27
NPIPA1-201ENST00000328085 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
NPIPA1-201ENST00000328085 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
NPIPA1-201ENST00000328085 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
NPIPA1-201ENST00000328085 CCER1Q8TC90 406 aaPredicted RBP13.33□□□□□ -0.28
NPIPA1-201ENST00000328085 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPIPA1-201ENST00000328085 TOPBP1Q92547 1522 aa13.26□□□□□ -0.29
NPIPA1-201ENST00000328085 PKNOX2Q96KN3 472 aa13.26□□□□□ -0.29
NPIPA1-201ENST00000328085 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
NPIPA1-201ENST00000328085 KCNA4P22459 653 aa13.22□□□□□ -0.29
NPIPA1-201ENST00000328085 DEKP35659 375 aaKnown RBP13.21□□□□□ -0.29
NPIPA1-201ENST00000328085 CLASP1Q7Z460 1538 aa13.2□□□□□ -0.3
NPIPA1-201ENST00000328085 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
NPIPA1-201ENST00000328085 GLIPR1L2Q4G1C9 344 aa13.19□□□□□ -0.3
NPIPA1-201ENST00000328085 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
NPIPA1-201ENST00000328085 KDM4FA0A1W2PPD8 638 aa13.16□□□□□ -0.3
NPIPA1-201ENST00000328085 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
NPIPA1-201ENST00000328085 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
NPIPA1-201ENST00000328085 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
NPIPA1-201ENST00000328085 MIER1Q8N108 512 aa13.15□□□□□ -0.3
NPIPA1-201ENST00000328085 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
NPIPA1-201ENST00000328085 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
NPIPA1-201ENST00000328085 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
NPIPA1-201ENST00000328085 PODXL2Q9NZ53 605 aa13.13□□□□□ -0.31
NPIPA1-201ENST00000328085 SALL2Q9Y467 1007 aaPredicted RBP13.13□□□□□ -0.31
NPIPA1-201ENST00000328085 CNKSR2Q8WXI2 1034 aa13.12□□□□□ -0.31
NPIPA1-201ENST00000328085 SYNJ1O43426 1573 aa13.11□□□□□ -0.31
NPIPA1-201ENST00000328085 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
NPIPA1-201ENST00000328085 SNAPC4Q5SXM2 1469 aa13.11□□□□□ -0.31
NPIPA1-201ENST00000328085 NEFLP07196 543 aa13.11□□□□□ -0.31
NPIPA1-201ENST00000328085 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
NPIPA1-201ENST00000328085 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
NPIPA1-201ENST00000328085 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
NPIPA1-201ENST00000328085 SOGA1O94964 1423 aa13.05□□□□□ -0.32
NPIPA1-201ENST00000328085 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
NPIPA1-201ENST00000328085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
NPIPA1-201ENST00000328085 ERCC6L2Q5T890 1561 aa13.02□□□□□ -0.33
NPIPA1-201ENST00000328085 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
NPIPA1-201ENST00000328085 MAGI1Q96QZ7 1491 aaPredicted RBP13□□□□□ -0.33
NPIPA1-201ENST00000328085 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
NPIPA1-201ENST00000328085 SYNJ2O15056 1496 aa12.99□□□□□ -0.33
NPIPA1-201ENST00000328085 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
NPIPA1-201ENST00000328085 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
NPIPA1-201ENST00000328085 FAM69CQ0P6D2 419 aa12.97□□□□□ -0.33
NPIPA1-201ENST00000328085 GRIN2BQ13224 1484 aa12.97□□□□□ -0.33
NPIPA1-201ENST00000328085 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
NPIPA1-201ENST00000328085 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
NPIPA1-201ENST00000328085 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
NPIPA1-201ENST00000328085 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
NPIPA1-201ENST00000328085 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
NPIPA1-201ENST00000328085 USP35Q9P2H5 1018 aa12.9□□□□□ -0.34
NPIPA1-201ENST00000328085 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
NPIPA1-201ENST00000328085 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
NPIPA1-201ENST00000328085 KDM6BO15054 1643 aa12.88□□□□□ -0.35
NPIPA1-201ENST00000328085 CEP170Q5SW79 1584 aa12.87□□□□□ -0.35
NPIPA1-201ENST00000328085 DCAF8L1A6NGE4 600 aa12.87□□□□□ -0.35
NPIPA1-201ENST00000328085 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
NPIPA1-201ENST00000328085 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
NPIPA1-201ENST00000328085 FBXO41Q8TF61 875 aa12.87□□□□□ -0.35
NPIPA1-201ENST00000328085 ABCC10Q5T3U5 1492 aa12.86□□□□□ -0.35
NPIPA1-201ENST00000328085 HECW2Q9P2P5 1572 aa12.86□□□□□ -0.35
NPIPA1-201ENST00000328085 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
NPIPA1-201ENST00000328085 FKBP8Q14318 412 aa12.83□□□□□ -0.36
NPIPA1-201ENST00000328085 NOP58Q9Y2X3 529 aaKnown RBP12.83□□□□□ -0.36
NPIPA1-201ENST00000328085 PBRM1Q86U86 1689 aa12.83□□□□□ -0.36
NPIPA1-201ENST00000328085 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
NPIPA1-201ENST00000328085 NPM1P06748 294 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPIPA1-201ENST00000328085 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
NPIPA1-201ENST00000328085 GRIN2AQ12879 1464 aa12.8□□□□□ -0.36
NPIPA1-201ENST00000328085 WASHC2CQ9Y4E1 1318 aa12.8□□□□□ -0.36
NPIPA1-201ENST00000328085 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
NPIPA1-201ENST00000328085 WASHC2AQ641Q2 1341 aa12.79□□□□□ -0.36
NPIPA1-201ENST00000328085 CUX1P39880 1505 aa12.78□□□□□ -0.36
NPIPA1-201ENST00000328085 TSPOAP1O95153 1857 aa12.77□□□□□ -0.37
NPIPA1-201ENST00000328085 NUP160Q12769 1436 aa12.77□□□□□ -0.37
NPIPA1-201ENST00000328085 SHROOM2Q13796 1616 aa12.77□□□□□ -0.37
NPIPA1-201ENST00000328085 ARXQ96QS3 562 aa12.76□□□□□ -0.37
NPIPA1-201ENST00000328085 PRG4Q92954 1404 aaPredicted RBP12.76□□□□□ -0.37
NPIPA1-201ENST00000328085 MAPKBP1O60336 1514 aa12.73□□□□□ -0.37
NPIPA1-201ENST00000328085 ZMYND15Q9H091 742 aa12.73□□□□□ -0.37
NPIPA1-201ENST00000328085 LMTK3Q96Q04 1460 aa12.72□□□□□ -0.37
NPIPA1-201ENST00000328085 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
NPIPA1-201ENST00000328085 ABCA5Q8WWZ7 1642 aa12.71□□□□□ -0.37
NPIPA1-201ENST00000328085 IL27Q8NEV9 243 aa12.71□□□□□ -0.37
NPIPA1-201ENST00000328085 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
NPIPA1-201ENST00000328085 PDE4CQ08493 712 aa12.7□□□□□ -0.38
NPIPA1-201ENST00000328085 RRP9O43818 475 aaKnown RBP12.69□□□□□ -0.38
NPIPA1-201ENST00000328085 FGD1P98174 961 aa12.69□□□□□ -0.38
NPIPA1-201ENST00000328085 FAM43AQ8N2R8 423 aa12.69□□□□□ -0.38
NPIPA1-201ENST00000328085 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
NPIPA1-201ENST00000328085 SLC4A1APQ9BWU0 796 aaKnown RBP12.68□□□□□ -0.38
NPIPA1-201ENST00000328085 PDIA4P13667 645 aaKnown RBP12.67□□□□□ -0.38
NPIPA1-201ENST00000328085 ADAMTS12P58397 1594 aa12.67□□□□□ -0.38
NPIPA1-201ENST00000328085 ADCY10Q96PN6 1610 aa12.66□□□□□ -0.38
NPIPA1-201ENST00000328085 ILDR2Q71H61 639 aa12.66□□□□□ -0.38
NPIPA1-201ENST00000328085 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms