RNA–Protein interactions for RNA: ENST00000327047.5

CLRN1-202, Transcript of clarin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN1, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-202ENST00000327047 YTHDC1Q96MU7 727 aaKnown RBP11.13□□□□□ -0.63
CLRN1-202ENST00000327047 DAXXQ9UER7 740 aaPredicted RBP11.13□□□□□ -0.63
CLRN1-202ENST00000327047 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
CLRN1-202ENST00000327047 PRDM2Q13029 1718 aa11.12□□□□□ -0.63
CLRN1-202ENST00000327047 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
CLRN1-202ENST00000327047 PPP6R1Q9UPN7 881 aa11.09□□□□□ -0.63
CLRN1-202ENST00000327047 WDR97A6NE52 1622 aa11.07□□□□□ -0.64
CLRN1-202ENST00000327047 ABCC8Q09428 1581 aa11.07□□□□□ -0.64
CLRN1-202ENST00000327047 ZNF608Q9ULD9 1512 aaPredicted RBP11.05□□□□□ -0.64
CLRN1-202ENST00000327047 KDM6BO15054 1643 aa11.04□□□□□ -0.64
CLRN1-202ENST00000327047 TTBK1Q5TCY1 1321 aaPredicted RBP11.02□□□□□ -0.64
CLRN1-202ENST00000327047 GAPVD1Q14C86 1478 aa11.01□□□□□ -0.65
CLRN1-202ENST00000327047 CFTRP13569 1480 aa11□□□□□ -0.65
CLRN1-202ENST00000327047 TIMELESSQ9UNS1 1208 aa11□□□□□ -0.65
CLRN1-202ENST00000327047 ZNF316A6NFI3 1004 aaPredicted RBP10.99□□□□□ -0.65
CLRN1-202ENST00000327047 SPATA31D1Q6ZQQ2 1576 aa10.99□□□□□ -0.65
CLRN1-202ENST00000327047 ADGRL1O94910 1474 aa10.97□□□□□ -0.65
CLRN1-202ENST00000327047 SYNJ2O15056 1496 aa10.97□□□□□ -0.65
CLRN1-202ENST00000327047 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
CLRN1-202ENST00000327047 MIER1Q8N108 512 aa10.96□□□□□ -0.65
CLRN1-202ENST00000327047 SOGA1O94964 1423 aa10.96□□□□□ -0.65
CLRN1-202ENST00000327047 ILDR2Q71H61 639 aa10.96□□□□□ -0.66
CLRN1-202ENST00000327047 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
CLRN1-202ENST00000327047 RUSC2Q8N2Y8 1516 aa10.93□□□□□ -0.66
CLRN1-202ENST00000327047 WRNQ14191 1432 aaPredicted RBP eCLIP10.93□□□□□ -0.66
CLRN1-202ENST00000327047 DISP3Q9P2K9 1392 aa10.93□□□□□ -0.66
CLRN1-202ENST00000327047 TOP2BQ02880 1626 aa10.91□□□□□ -0.66
CLRN1-202ENST00000327047 NPM3O75607 178 aaKnown RBP10.91□□□□□ -0.66
CLRN1-202ENST00000327047 ABCC10Q5T3U5 1492 aa10.9□□□□□ -0.67
CLRN1-202ENST00000327047 MAPKBP1O60336 1514 aa10.88□□□□□ -0.67
CLRN1-202ENST00000327047 DIP2BQ9P265 1576 aa10.88□□□□□ -0.67
CLRN1-202ENST00000327047 MAGI1Q96QZ7 1491 aaPredicted RBP10.88□□□□□ -0.67
CLRN1-202ENST00000327047 TOPBP1Q92547 1522 aa10.87□□□□□ -0.67
CLRN1-202ENST00000327047 EEA1Q15075 1411 aa10.87□□□□□ -0.67
CLRN1-202ENST00000327047 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
CLRN1-202ENST00000327047 DNMBPQ6XZF7 1577 aa10.85□□□□□ -0.67
CLRN1-202ENST00000327047 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
CLRN1-202ENST00000327047 TULP1O00294 542 aaPredicted RBP10.83□□□□□ -0.68
CLRN1-202ENST00000327047 ANP32EQ9BTT0 268 aa10.83□□□□□ -0.68
CLRN1-202ENST00000327047 TNIKQ9UKE5 1360 aa10.82□□□□□ -0.68
CLRN1-202ENST00000327047 SUPT16HQ9Y5B9 1047 aaKnown RBP10.81□□□□□ -0.68
CLRN1-202ENST00000327047 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
CLRN1-202ENST00000327047 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
CLRN1-202ENST00000327047 TSHZ2Q9NRE2 1034 aa10.78□□□□□ -0.68
CLRN1-202ENST00000327047 CEP162Q5TB80 1403 aa10.78□□□□□ -0.68
CLRN1-202ENST00000327047 SNAPC4Q5SXM2 1469 aa10.78□□□□□ -0.68
CLRN1-202ENST00000327047 FKBP8Q14318 412 aa10.77□□□□□ -0.68
CLRN1-202ENST00000327047 AQRO60306 1485 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLRN1-202ENST00000327047 PPP4R3CPQ6ZMV5 832 aa10.77□□□□□ -0.69
CLRN1-202ENST00000327047 BCANQ96GW7 911 aa10.75□□□□□ -0.69
CLRN1-202ENST00000327047 GOLGA3Q08378 1498 aa10.75□□□□□ -0.69
CLRN1-202ENST00000327047 BIVM-ERCC5R4GMW8 1640 aa10.75□□□□□ -0.69
CLRN1-202ENST00000327047 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
CLRN1-202ENST00000327047 HNRNPUL2Q1KMD3 747 aaKnown RBP10.74□□□□□ -0.69
CLRN1-202ENST00000327047 CUX1P39880 1505 aa10.74□□□□□ -0.69
CLRN1-202ENST00000327047 UBTFP17480 764 aaKnown RBP10.73□□□□□ -0.69
CLRN1-202ENST00000327047 KIF21BO75037 1637 aa10.72□□□□□ -0.69
CLRN1-202ENST00000327047 FBLN2P98095 1184 aa10.72□□□□□ -0.69
CLRN1-202ENST00000327047 FOXD1Q16676 465 aa10.71□□□□□ -0.69
CLRN1-202ENST00000327047 CLSPNQ9HAW4 1339 aa10.71□□□□□ -0.7
CLRN1-202ENST00000327047 CEP170Q5SW79 1584 aa10.71□□□□□ -0.7
CLRN1-202ENST00000327047 RAPGEF2Q9Y4G8 1499 aa10.7□□□□□ -0.7
CLRN1-202ENST00000327047 GRIN2BQ13224 1484 aa10.69□□□□□ -0.7
CLRN1-202ENST00000327047 TSPOAP1O95153 1857 aa10.69□□□□□ -0.7
CLRN1-202ENST00000327047 PBRM1Q86U86 1689 aa10.68□□□□□ -0.7
CLRN1-202ENST00000327047 GLI2P10070 1586 aa10.67□□□□□ -0.7
CLRN1-202ENST00000327047 PPRC1Q5VV67 1664 aaKnown RBP10.67□□□□□ -0.7
CLRN1-202ENST00000327047 FAM69CQ0P6D2 419 aa10.67□□□□□ -0.7
CLRN1-202ENST00000327047 PRXQ9BXM0 1461 aa10.66□□□□□ -0.7
CLRN1-202ENST00000327047 ARXQ96QS3 562 aa10.66□□□□□ -0.7
CLRN1-202ENST00000327047 CHMP7Q8WUX9 453 aaPredicted RBP10.66□□□□□ -0.7
CLRN1-202ENST00000327047 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
CLRN1-202ENST00000327047 PCF11O94913 1555 aaKnown RBP10.63□□□□□ -0.71
CLRN1-202ENST00000327047 CLIP1P30622 1438 aa10.62□□□□□ -0.71
CLRN1-202ENST00000327047 CERKQ8TCT0 537 aa10.62□□□□□ -0.71
CLRN1-202ENST00000327047 KIF27Q86VH2 1401 aa10.61□□□□□ -0.71
CLRN1-202ENST00000327047 ERICH3Q5RHP9 1530 aa10.6□□□□□ -0.71
CLRN1-202ENST00000327047 IQSEC2Q5JU85 1478 aa10.59□□□□□ -0.71
CLRN1-202ENST00000327047 NUP160Q12769 1436 aa10.58□□□□□ -0.72
CLRN1-202ENST00000327047 IGF1RP08069 1367 aa10.57□□□□□ -0.72
CLRN1-202ENST00000327047 VPS8Q8N3P4 1428 aa10.57□□□□□ -0.72
CLRN1-202ENST00000327047 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
CLRN1-202ENST00000327047 KIAA0586Q9BVV6 1533 aa10.55□□□□□ -0.72
CLRN1-202ENST00000327047 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
CLRN1-202ENST00000327047 ADAMTSL3P82987 1691 aa10.55□□□□□ -0.72
CLRN1-202ENST00000327047 KCNH8Q96L42 1107 aa10.55□□□□□ -0.72
CLRN1-202ENST00000327047 NPM1P06748 294 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLRN1-202ENST00000327047 TEX14Q8IWB6 1497 aa10.54□□□□□ -0.72
CLRN1-202ENST00000327047 RBM19Q9Y4C8 960 aaKnown RBP10.53□□□□□ -0.72
CLRN1-202ENST00000327047 GRIN2AQ12879 1464 aa10.52□□□□□ -0.73
CLRN1-202ENST00000327047 KDM2AQ9Y2K7 1162 aa10.51□□□□□ -0.73
CLRN1-202ENST00000327047 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
CLRN1-202ENST00000327047 RANGAP1P46060 587 aaPredicted RBP10.51□□□□□ -0.73
CLRN1-202ENST00000327047 ABCA5Q8WWZ7 1642 aa10.49□□□□□ -0.73
CLRN1-202ENST00000327047 APLP2Q06481 763 aa10.48□□□□□ -0.73
CLRN1-202ENST00000327047 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
CLRN1-202ENST00000327047 FOXD4L1Q9NU39 408 aa10.48□□□□□ -0.73
CLRN1-202ENST00000327047 CARMIL1Q5VZK9 1371 aa10.48□□□□□ -0.73
CLRN1-202ENST00000327047 TDRD9Q8NDG6 1382 aaKnown RBP10.48□□□□□ -0.73
CLRN1-202ENST00000327047 PTPRMP28827 1452 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms