RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 PHLDB1Q86UU1 1377 aa18.92■□□□□ 0.62
CLGN-201ENST00000325617 CLSPNQ9HAW4 1339 aa18.92■□□□□ 0.62
CLGN-201ENST00000325617 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
CLGN-201ENST00000325617 FHOD3Q2V2M9 1422 aa18.84■□□□□ 0.61
CLGN-201ENST00000325617 MAPKBP1O60336 1514 aa18.84■□□□□ 0.61
CLGN-201ENST00000325617 RAD54L2Q9Y4B4 1467 aa18.83■□□□□ 0.61
CLGN-201ENST00000325617 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
CLGN-201ENST00000325617 CADPSQ9ULU8 1353 aa18.81■□□□□ 0.6
CLGN-201ENST00000325617 WDR97A6NE52 1622 aa18.8■□□□□ 0.6
CLGN-201ENST00000325617 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
CLGN-201ENST00000325617 ARID3CA6NKF2 412 aa18.79■□□□□ 0.6
CLGN-201ENST00000325617 TIAM1Q13009 1591 aa18.79■□□□□ 0.6
CLGN-201ENST00000325617 LRRC9Q6ZRR7 1453 aa18.78■□□□□ 0.6
CLGN-201ENST00000325617 NESP48681 1621 aa18.74■□□□□ 0.59
CLGN-201ENST00000325617 FKBP8Q14318 412 aa18.74■□□□□ 0.59
CLGN-201ENST00000325617 CC2D2AQ9P2K1 1620 aa18.73■□□□□ 0.59
CLGN-201ENST00000325617 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
CLGN-201ENST00000325617 TSHZ2Q9NRE2 1034 aa18.71■□□□□ 0.59
CLGN-201ENST00000325617 PCF11O94913 1555 aaKnown RBP18.71■□□□□ 0.59
CLGN-201ENST00000325617 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
CLGN-201ENST00000325617 FANCD2Q9BXW9 1451 aa18.67■□□□□ 0.58
CLGN-201ENST00000325617 TDRD9Q8NDG6 1382 aaKnown RBP18.66■□□□□ 0.58
CLGN-201ENST00000325617 PPP1R15AO75807 674 aaPredicted RBP18.66■□□□□ 0.58
CLGN-201ENST00000325617 RRP7BPQ9NSQ0 103 aa18.63■□□□□ 0.57
CLGN-201ENST00000325617 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
CLGN-201ENST00000325617 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
CLGN-201ENST00000325617 IRX6P78412 446 aaPredicted RBP18.59■□□□□ 0.57
CLGN-201ENST00000325617 MTUS2Q5JR59 1369 aa18.58■□□□□ 0.57
CLGN-201ENST00000325617 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
CLGN-201ENST00000325617 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.56
CLGN-201ENST00000325617 FOXD1Q16676 465 aa18.57■□□□□ 0.56
CLGN-201ENST00000325617 ANP32CO43423 234 aa18.56■□□□□ 0.56
CLGN-201ENST00000325617 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
CLGN-201ENST00000325617 PRDM2Q13029 1718 aa18.54■□□□□ 0.56
CLGN-201ENST00000325617 TOPBP1Q92547 1522 aa18.53■□□□□ 0.56
CLGN-201ENST00000325617 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLGN-201ENST00000325617 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
CLGN-201ENST00000325617 MAP3K1Q13233 1512 aa18.5■□□□□ 0.55
CLGN-201ENST00000325617 CFAP43Q8NDM7 1665 aa18.49■□□□□ 0.55
CLGN-201ENST00000325617 CASKIN1Q8WXD9 1431 aa18.48■□□□□ 0.55
CLGN-201ENST00000325617 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
CLGN-201ENST00000325617 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
CLGN-201ENST00000325617 FYCO1Q9BQS8 1478 aa18.45■□□□□ 0.54
CLGN-201ENST00000325617 HNRNPUQ00839 825 aaKnown RBP eCLIP18.44■□□□□ 0.54
CLGN-201ENST00000325617 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
CLGN-201ENST00000325617 NEFLP07196 543 aa18.44■□□□□ 0.54
CLGN-201ENST00000325617 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
CLGN-201ENST00000325617 BCL11AQ9H165 835 aa18.44■□□□□ 0.54
CLGN-201ENST00000325617 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
CLGN-201ENST00000325617 PRKCSHP14314 528 aaPredicted RBP18.42■□□□□ 0.54
CLGN-201ENST00000325617 URB2Q14146 1524 aaKnown RBP18.41■□□□□ 0.54
CLGN-201ENST00000325617 HSPA5P11021 654 aaKnown RBP18.41■□□□□ 0.54
CLGN-201ENST00000325617 NCOA2Q15596 1464 aa18.4■□□□□ 0.54
CLGN-201ENST00000325617 NAIPQ13075 1403 aa18.39■□□□□ 0.53
CLGN-201ENST00000325617 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
CLGN-201ENST00000325617 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
CLGN-201ENST00000325617 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
CLGN-201ENST00000325617 C11orf95C9JLR9 678 aaPredicted RBP18.36■□□□□ 0.53
CLGN-201ENST00000325617 TIMELESSQ9UNS1 1208 aa18.36■□□□□ 0.53
CLGN-201ENST00000325617 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
CLGN-201ENST00000325617 CCER2I3L3R5 266 aa18.35■□□□□ 0.53
CLGN-201ENST00000325617 CTTNBP2Q8WZ74 1663 aa18.35■□□□□ 0.53
CLGN-201ENST00000325617 UACAQ9BZF9 1416 aa18.34■□□□□ 0.53
CLGN-201ENST00000325617 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
CLGN-201ENST00000325617 RBM19Q9Y4C8 960 aaKnown RBP18.34■□□□□ 0.53
CLGN-201ENST00000325617 PTPN23Q9H3S7 1636 aa18.34■□□□□ 0.53
CLGN-201ENST00000325617 GAPVD1Q14C86 1478 aa18.34■□□□□ 0.53
CLGN-201ENST00000325617 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
CLGN-201ENST00000325617 HFM1A2PYH4 1435 aa18.33■□□□□ 0.53
CLGN-201ENST00000325617 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
CLGN-201ENST00000325617 MYOM3Q5VTT5 1437 aa18.33■□□□□ 0.52
CLGN-201ENST00000325617 MAGI3Q5TCQ9 1506 aa18.33■□□□□ 0.52
CLGN-201ENST00000325617 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
CLGN-201ENST00000325617 EFCAB5A4FU69 1503 aa18.32■□□□□ 0.52
CLGN-201ENST00000325617 KDM6BO15054 1643 aa18.3■□□□□ 0.52
CLGN-201ENST00000325617 MPHOSPH9Q99550 1183 aa18.29■□□□□ 0.52
CLGN-201ENST00000325617 ANP32EQ9BTT0 268 aa18.29■□□□□ 0.52
CLGN-201ENST00000325617 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
CLGN-201ENST00000325617 CDK13Q14004 1512 aaKnown RBP18.27■□□□□ 0.52
CLGN-201ENST00000325617 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
CLGN-201ENST00000325617 CUL7Q14999 1698 aa18.26■□□□□ 0.51
CLGN-201ENST00000325617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.26■□□□□ 0.51
CLGN-201ENST00000325617 NBPF8Q3BBV2 869 aa18.25■□□□□ 0.51
CLGN-201ENST00000325617 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
CLGN-201ENST00000325617 EIF4G2P78344 907 aaKnown RBP eCLIP18.24■□□□□ 0.51
CLGN-201ENST00000325617 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
CLGN-201ENST00000325617 KDM5BQ9UGL1 1544 aa18.24■□□□□ 0.51
CLGN-201ENST00000325617 ZNF777Q9ULD5 760 aaPredicted RBP18.23■□□□□ 0.51
CLGN-201ENST00000325617 SUPT6HQ7KZ85 1726 aaKnown RBP18.19■□□□□ 0.5
CLGN-201ENST00000325617 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
CLGN-201ENST00000325617 SAMD9Q5K651 1589 aa18.19■□□□□ 0.5
CLGN-201ENST00000325617 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
CLGN-201ENST00000325617 SLC4A1APQ9BWU0 796 aaKnown RBP18.17■□□□□ 0.5
CLGN-201ENST00000325617 MSH5O43196 834 aa18.17■□□□□ 0.5
CLGN-201ENST00000325617 ABCA5Q8WWZ7 1642 aa18.16■□□□□ 0.5
CLGN-201ENST00000325617 UGGT2Q9NYU1 1516 aa18.16■□□□□ 0.5
CLGN-201ENST00000325617 B4GALNT3Q6L9W6 998 aa18.15■□□□□ 0.5
CLGN-201ENST00000325617 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
CLGN-201ENST00000325617 FBLN2P98095 1184 aa18.15■□□□□ 0.5
CLGN-201ENST00000325617 THOC2Q8NI27 1593 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms