RNA–Protein interactions for RNA: ENST00000323084.8

TSPEAR-201, Transcript of thrombospondin type laminin G domain and EAR repeats, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPEAR, Length 3,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPEAR-201ENST00000323084 FANCD2Q9BXW9 1451 aa17.54■□□□□ 0.4
TSPEAR-201ENST00000323084 TDRD9Q8NDG6 1382 aaKnown RBP17.54■□□□□ 0.4
TSPEAR-201ENST00000323084 CFTRP13569 1480 aa17.53■□□□□ 0.4
TSPEAR-201ENST00000323084 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.39
TSPEAR-201ENST00000323084 KANK4Q5T7N3 995 aaPredicted RBP17.51■□□□□ 0.39
TSPEAR-201ENST00000323084 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
TSPEAR-201ENST00000323084 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
TSPEAR-201ENST00000323084 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
TSPEAR-201ENST00000323084 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
TSPEAR-201ENST00000323084 ZNF777Q9ULD5 760 aaPredicted RBP17.45■□□□□ 0.38
TSPEAR-201ENST00000323084 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
TSPEAR-201ENST00000323084 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
TSPEAR-201ENST00000323084 IGF1RP08069 1367 aa17.42■□□□□ 0.38
TSPEAR-201ENST00000323084 ERCC6Q03468 1493 aa17.41■□□□□ 0.38
TSPEAR-201ENST00000323084 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
TSPEAR-201ENST00000323084 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
TSPEAR-201ENST00000323084 NESP48681 1621 aa17.4■□□□□ 0.38
TSPEAR-201ENST00000323084 CUX1P39880 1505 aa17.4■□□□□ 0.38
TSPEAR-201ENST00000323084 DHX57Q6P158 1386 aaKnown RBP17.39■□□□□ 0.37
TSPEAR-201ENST00000323084 HNRNPUQ00839 825 aaKnown RBP eCLIP17.39■□□□□ 0.37
TSPEAR-201ENST00000323084 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
TSPEAR-201ENST00000323084 HIRIP3Q9BW71 556 aaPredicted RBP17.38■□□□□ 0.37
TSPEAR-201ENST00000323084 CHIC2Q9UKJ5 165 aa17.38■□□□□ 0.37
TSPEAR-201ENST00000323084 IRX6P78412 446 aaPredicted RBP17.38■□□□□ 0.37
TSPEAR-201ENST00000323084 SLC4A1APQ9BWU0 796 aaKnown RBP17.37■□□□□ 0.37
TSPEAR-201ENST00000323084 FHAD1B1AJZ9 1412 aa17.36■□□□□ 0.37
TSPEAR-201ENST00000323084 KIF21BO75037 1637 aa17.34■□□□□ 0.37
TSPEAR-201ENST00000323084 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.37
TSPEAR-201ENST00000323084 FHOD3Q2V2M9 1422 aa17.29■□□□□ 0.36
TSPEAR-201ENST00000323084 PRXQ9BXM0 1461 aa17.28■□□□□ 0.36
TSPEAR-201ENST00000323084 NBR1Q14596 966 aa17.28■□□□□ 0.36
TSPEAR-201ENST00000323084 SIN3AQ96ST3 1273 aa17.25■□□□□ 0.35
TSPEAR-201ENST00000323084 CCER2I3L3R5 266 aa17.25■□□□□ 0.35
TSPEAR-201ENST00000323084 RRP7BPQ9NSQ0 103 aa17.24■□□□□ 0.35
TSPEAR-201ENST00000323084 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
TSPEAR-201ENST00000323084 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
TSPEAR-201ENST00000323084 DEKP35659 375 aaKnown RBP17.21■□□□□ 0.35
TSPEAR-201ENST00000323084 ANP32AP39687 249 aaKnown RBP17.21■□□□□ 0.34
TSPEAR-201ENST00000323084 ARAP1Q96P48 1450 aa17.2■□□□□ 0.34
TSPEAR-201ENST00000323084 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
TSPEAR-201ENST00000323084 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
TSPEAR-201ENST00000323084 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
TSPEAR-201ENST00000323084 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
TSPEAR-201ENST00000323084 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
TSPEAR-201ENST00000323084 FANCIQ9NVI1 1328 aa17.15■□□□□ 0.34
TSPEAR-201ENST00000323084 ARHGAP35Q9NRY4 1499 aa17.14■□□□□ 0.33
TSPEAR-201ENST00000323084 RAB3GAP2Q9H2M9 1393 aa17.13■□□□□ 0.33
TSPEAR-201ENST00000323084 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
TSPEAR-201ENST00000323084 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
TSPEAR-201ENST00000323084 PLEKHD1A6NEE1 506 aa17.12■□□□□ 0.33
TSPEAR-201ENST00000323084 AQRO60306 1485 aaKnown RBP eCLIP17.12■□□□□ 0.33
TSPEAR-201ENST00000323084 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
TSPEAR-201ENST00000323084 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
TSPEAR-201ENST00000323084 TIMELESSQ9UNS1 1208 aa17.09■□□□□ 0.33
TSPEAR-201ENST00000323084 DNMBPQ6XZF7 1577 aa17.09■□□□□ 0.33
TSPEAR-201ENST00000323084 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
TSPEAR-201ENST00000323084 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
TSPEAR-201ENST00000323084 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
TSPEAR-201ENST00000323084 MSH5O43196 834 aa17.06■□□□□ 0.32
TSPEAR-201ENST00000323084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPEAR-201ENST00000323084 TSPY4P0CV99 314 aa17.05■□□□□ 0.32
TSPEAR-201ENST00000323084 TSPY10P0CW01 314 aa17.05■□□□□ 0.32
TSPEAR-201ENST00000323084 SENP3-EIF4A1A0A087X0R7 540 aa17.05■□□□□ 0.32
TSPEAR-201ENST00000323084 CCDC136Q96JN2 1154 aa17.04■□□□□ 0.32
TSPEAR-201ENST00000323084 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
TSPEAR-201ENST00000323084 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
TSPEAR-201ENST00000323084 NPM2Q86SE8 214 aaKnown RBP17.03■□□□□ 0.32
TSPEAR-201ENST00000323084 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
TSPEAR-201ENST00000323084 ERICH6BQ5W0A0 696 aa17.03■□□□□ 0.32
TSPEAR-201ENST00000323084 PPP1R15AO75807 674 aaPredicted RBP17.02■□□□□ 0.32
TSPEAR-201ENST00000323084 SENP3Q9H4L4 574 aaPredicted RBP17.02■□□□□ 0.32
TSPEAR-201ENST00000323084 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
TSPEAR-201ENST00000323084 KDM2AQ9Y2K7 1162 aa17.01■□□□□ 0.31
TSPEAR-201ENST00000323084 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
TSPEAR-201ENST00000323084 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
TSPEAR-201ENST00000323084 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
TSPEAR-201ENST00000323084 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
TSPEAR-201ENST00000323084 LRRC9Q6ZRR7 1453 aa16.96■□□□□ 0.31
TSPEAR-201ENST00000323084 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
TSPEAR-201ENST00000323084 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
TSPEAR-201ENST00000323084 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
TSPEAR-201ENST00000323084 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
TSPEAR-201ENST00000323084 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
TSPEAR-201ENST00000323084 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
TSPEAR-201ENST00000323084 GRIN2BQ13224 1484 aa16.92■□□□□ 0.3
TSPEAR-201ENST00000323084 RTN4Q9NQC3 1192 aaKnown RBP16.92■□□□□ 0.3
TSPEAR-201ENST00000323084 CASKIN1Q8WXD9 1431 aa16.91■□□□□ 0.3
TSPEAR-201ENST00000323084 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
TSPEAR-201ENST00000323084 EIF5BO60841 1220 aaKnown RBP16.89■□□□□ 0.29
TSPEAR-201ENST00000323084 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
TSPEAR-201ENST00000323084 FOXD1Q16676 465 aa16.87■□□□□ 0.29
TSPEAR-201ENST00000323084 FYCO1Q9BQS8 1478 aa16.84■□□□□ 0.29
TSPEAR-201ENST00000323084 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
TSPEAR-201ENST00000323084 IFT140Q96RY7 1462 aa16.84■□□□□ 0.29
TSPEAR-201ENST00000323084 EFCAB5A4FU69 1503 aa16.84■□□□□ 0.29
TSPEAR-201ENST00000323084 TIAM1Q13009 1591 aa16.83■□□□□ 0.29
TSPEAR-201ENST00000323084 WDR97A6NE52 1622 aa16.83■□□□□ 0.28
TSPEAR-201ENST00000323084 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
TSPEAR-201ENST00000323084 CCDC18Q5T9S5 1454 aa16.82■□□□□ 0.28
TSPEAR-201ENST00000323084 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms