RNA–Protein interactions for RNA: ENST00000318876.9

ZFYVE1-201, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 1 (best) BASIC

Gene ZFYVE1, Length 4,362 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-201ENST00000318876 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
ZFYVE1-201ENST00000318876 CLIP1P30622 1438 aa13.33□□□□□ -0.28
ZFYVE1-201ENST00000318876 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
ZFYVE1-201ENST00000318876 TOPBP1Q92547 1522 aa13.33□□□□□ -0.28
ZFYVE1-201ENST00000318876 ANP32CO43423 234 aa13.32□□□□□ -0.28
ZFYVE1-201ENST00000318876 CDK11AQ9UQ88 783 aaPredicted RBP13.31□□□□□ -0.28
ZFYVE1-201ENST00000318876 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
ZFYVE1-201ENST00000318876 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
ZFYVE1-201ENST00000318876 SYNJ1O43426 1573 aa13.29□□□□□ -0.28
ZFYVE1-201ENST00000318876 CUX1P39880 1505 aa13.29□□□□□ -0.28
ZFYVE1-201ENST00000318876 OSCARQ8IYS5 282 aa13.28□□□□□ -0.28
ZFYVE1-201ENST00000318876 POLA1P09884 1462 aaPredicted RBP13.28□□□□□ -0.28
ZFYVE1-201ENST00000318876 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
ZFYVE1-201ENST00000318876 TNIKQ9UKE5 1360 aa13.27□□□□□ -0.28
ZFYVE1-201ENST00000318876 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
ZFYVE1-201ENST00000318876 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
ZFYVE1-201ENST00000318876 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
ZFYVE1-201ENST00000318876 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
ZFYVE1-201ENST00000318876 JPH4Q96JJ6 628 aa13.24□□□□□ -0.29
ZFYVE1-201ENST00000318876 TSHZ2Q9NRE2 1034 aa13.24□□□□□ -0.29
ZFYVE1-201ENST00000318876 IGF1RP08069 1367 aa13.23□□□□□ -0.29
ZFYVE1-201ENST00000318876 RAPGEF2Q9Y4G8 1499 aa13.22□□□□□ -0.29
ZFYVE1-201ENST00000318876 CNGB1Q14028 1251 aaPredicted RBP13.21□□□□□ -0.29
ZFYVE1-201ENST00000318876 PLPPR3Q6T4P5 718 aa13.2□□□□□ -0.3
ZFYVE1-201ENST00000318876 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
ZFYVE1-201ENST00000318876 IFT140Q96RY7 1462 aa13.2□□□□□ -0.3
ZFYVE1-201ENST00000318876 DNMBPQ6XZF7 1577 aa13.19□□□□□ -0.3
ZFYVE1-201ENST00000318876 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
ZFYVE1-201ENST00000318876 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
ZFYVE1-201ENST00000318876 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
ZFYVE1-201ENST00000318876 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
ZFYVE1-201ENST00000318876 GRIN2BQ13224 1484 aa13.15□□□□□ -0.3
ZFYVE1-201ENST00000318876 CHIC2Q9UKJ5 165 aa13.15□□□□□ -0.3
ZFYVE1-201ENST00000318876 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
ZFYVE1-201ENST00000318876 SNAPC4Q5SXM2 1469 aa13.13□□□□□ -0.31
ZFYVE1-201ENST00000318876 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
ZFYVE1-201ENST00000318876 CARMIL2Q6F5E8 1435 aa13.13□□□□□ -0.31
ZFYVE1-201ENST00000318876 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
ZFYVE1-201ENST00000318876 IRX6P78412 446 aaPredicted RBP13.13□□□□□ -0.31
ZFYVE1-201ENST00000318876 FHOD3Q2V2M9 1422 aa13.12□□□□□ -0.31
ZFYVE1-201ENST00000318876 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
ZFYVE1-201ENST00000318876 KIF21AQ7Z4S6 1674 aa13.11□□□□□ -0.31
ZFYVE1-201ENST00000318876 FHAD1B1AJZ9 1412 aa13.08□□□□□ -0.32
ZFYVE1-201ENST00000318876 NBR1Q14596 966 aa13.05□□□□□ -0.32
ZFYVE1-201ENST00000318876 PTPRGP23470 1445 aa13.04□□□□□ -0.32
ZFYVE1-201ENST00000318876 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
ZFYVE1-201ENST00000318876 CFDP1Q9UEE9 299 aaPredicted RBP13.02□□□□□ -0.32
ZFYVE1-201ENST00000318876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
ZFYVE1-201ENST00000318876 DAXXQ9UER7 740 aaPredicted RBP13.02□□□□□ -0.33
ZFYVE1-201ENST00000318876 ANP32AP39687 249 aaKnown RBP13□□□□□ -0.33
ZFYVE1-201ENST00000318876 TONSLQ96HA7 1378 aa13□□□□□ -0.33
ZFYVE1-201ENST00000318876 KANK4Q5T7N3 995 aaPredicted RBP13□□□□□ -0.33
ZFYVE1-201ENST00000318876 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
ZFYVE1-201ENST00000318876 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
ZFYVE1-201ENST00000318876 PRG4Q92954 1404 aaPredicted RBP12.99□□□□□ -0.33
ZFYVE1-201ENST00000318876 FAM9BQ8IZU0 186 aa12.99□□□□□ -0.33
ZFYVE1-201ENST00000318876 SIN3AQ96ST3 1273 aa12.99□□□□□ -0.33
ZFYVE1-201ENST00000318876 VPS8Q8N3P4 1428 aa12.98□□□□□ -0.33
ZFYVE1-201ENST00000318876 ESF1Q9H501 851 aaKnown RBP12.98□□□□□ -0.33
ZFYVE1-201ENST00000318876 RRP7BPQ9NSQ0 103 aa12.98□□□□□ -0.33
ZFYVE1-201ENST00000318876 ARID4BQ4LE39 1312 aaPredicted RBP12.95□□□□□ -0.34
ZFYVE1-201ENST00000318876 FMN1Q68DA7 1419 aa12.94□□□□□ -0.34
ZFYVE1-201ENST00000318876 NPM2Q86SE8 214 aaKnown RBP12.93□□□□□ -0.34
ZFYVE1-201ENST00000318876 ZNF326Q5BKZ1 582 aaKnown RBP12.93□□□□□ -0.34
ZFYVE1-201ENST00000318876 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
ZFYVE1-201ENST00000318876 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
ZFYVE1-201ENST00000318876 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
ZFYVE1-201ENST00000318876 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
ZFYVE1-201ENST00000318876 WDR62O43379 1518 aa12.91□□□□□ -0.34
ZFYVE1-201ENST00000318876 PRXQ9BXM0 1461 aa12.91□□□□□ -0.34
ZFYVE1-201ENST00000318876 MLECQ14165 292 aa12.9□□□□□ -0.34
ZFYVE1-201ENST00000318876 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
ZFYVE1-201ENST00000318876 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
ZFYVE1-201ENST00000318876 GRIN2AQ12879 1464 aa12.89□□□□□ -0.35
ZFYVE1-201ENST00000318876 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
ZFYVE1-201ENST00000318876 MAGI1Q96QZ7 1491 aaPredicted RBP12.88□□□□□ -0.35
ZFYVE1-201ENST00000318876 FAM69CQ0P6D2 419 aa12.88□□□□□ -0.35
ZFYVE1-201ENST00000318876 CCDC136Q96JN2 1154 aa12.88□□□□□ -0.35
ZFYVE1-201ENST00000318876 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
ZFYVE1-201ENST00000318876 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
ZFYVE1-201ENST00000318876 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
ZFYVE1-201ENST00000318876 PPP4R2Q9NY27 417 aa12.85□□□□□ -0.35
ZFYVE1-201ENST00000318876 B4GALNT3Q6L9W6 998 aa12.85□□□□□ -0.35
ZFYVE1-201ENST00000318876 PRDM2Q13029 1718 aa12.84□□□□□ -0.35
ZFYVE1-201ENST00000318876 ERICH3Q5RHP9 1530 aa12.84□□□□□ -0.35
ZFYVE1-201ENST00000318876 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.35
ZFYVE1-201ENST00000318876 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
ZFYVE1-201ENST00000318876 HNRNPMP52272 730 aaKnown RBP eCLIP12.83□□□□□ -0.36
ZFYVE1-201ENST00000318876 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
ZFYVE1-201ENST00000318876 EFCAB2Q5VUJ9 269 aa12.81□□□□□ -0.36
ZFYVE1-201ENST00000318876 NOP58Q9Y2X3 529 aaKnown RBP12.81□□□□□ -0.36
ZFYVE1-201ENST00000318876 RAB3GAP2Q9H2M9 1393 aa12.81□□□□□ -0.36
ZFYVE1-201ENST00000318876 EIF5BO60841 1220 aaKnown RBP12.81□□□□□ -0.36
ZFYVE1-201ENST00000318876 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
ZFYVE1-201ENST00000318876 KIF21BO75037 1637 aa12.8□□□□□ -0.36
ZFYVE1-201ENST00000318876 ARAP1Q96P48 1450 aa12.79□□□□□ -0.36
ZFYVE1-201ENST00000318876 EIF4G2P78344 907 aaKnown RBP eCLIP12.78□□□□□ -0.36
ZFYVE1-201ENST00000318876 SENP3-EIF4A1A0A087X0R7 540 aa12.77□□□□□ -0.37
ZFYVE1-201ENST00000318876 TIMELESSQ9UNS1 1208 aa12.77□□□□□ -0.37
ZFYVE1-201ENST00000318876 GGT6Q6P531 493 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms