RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 CEP162Q5TB80 1403 aa5.2□□□□□ -1.58
GEN1-201ENST00000317402 RTN4Q9NQC3 1192 aaKnown RBP5.19□□□□□ -1.58
GEN1-201ENST00000317402 APLP2Q06481 763 aa5.18□□□□□ -1.58
GEN1-201ENST00000317402 HMGXB3Q12766 1538 aa5.18□□□□□ -1.58
GEN1-201ENST00000317402 CCDC136Q96JN2 1154 aa5.18□□□□□ -1.58
GEN1-201ENST00000317402 RTL5Q5HYW3 569 aaPredicted RBP5.17□□□□□ -1.58
GEN1-201ENST00000317402 NEFLP07196 543 aa5.16□□□□□ -1.58
GEN1-201ENST00000317402 FBLN2P98095 1184 aa5.16□□□□□ -1.58
GEN1-201ENST00000317402 BAZ2BQ9UIF8 2168 aaKnown RBP5.15□□□□□ -1.58
GEN1-201ENST00000317402 MYO18AQ92614 2054 aaKnown RBP5.14□□□□□ -1.59
GEN1-201ENST00000317402 RAPGEF2Q9Y4G8 1499 aa5.13□□□□□ -1.59
GEN1-201ENST00000317402 MYH11P35749 1972 aa5.13□□□□□ -1.59
GEN1-201ENST00000317402 NBR1Q14596 966 aa5.12□□□□□ -1.59
GEN1-201ENST00000317402 CFAP65Q6ZU64 1925 aaKnown RBP5.11□□□□□ -1.59
GEN1-201ENST00000317402 PAK3O75914 559 aaPredicted RBP5.1□□□□□ -1.59
GEN1-201ENST00000317402 RRP7BPQ9NSQ0 103 aa5.1□□□□□ -1.59
GEN1-201ENST00000317402 B4GALNT3Q6L9W6 998 aa5.1□□□□□ -1.59
GEN1-201ENST00000317402 ZNF326Q5BKZ1 582 aaKnown RBP5.1□□□□□ -1.59
GEN1-201ENST00000317402 KNL1Q8NG31 2342 aa5.09□□□□□ -1.59
GEN1-201ENST00000317402 SLC4A3P48751 1232 aa5.09□□□□□ -1.59
GEN1-201ENST00000317402 KAT6AQ92794 2004 aa5.09□□□□□ -1.59
GEN1-201ENST00000317402 DHX57Q6P158 1386 aaKnown RBP5.09□□□□□ -1.59
GEN1-201ENST00000317402 BICRAQ9NZM4 1560 aa5.09□□□□□ -1.59
GEN1-201ENST00000317402 SETD1BQ9UPS6 1966 aaKnown RBP5.09□□□□□ -1.59
GEN1-201ENST00000317402 FAM9BQ8IZU0 186 aa5.08□□□□□ -1.6
GEN1-201ENST00000317402 WDR97A6NE52 1622 aa5.08□□□□□ -1.6
GEN1-201ENST00000317402 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.08□□□□□ -1.6
GEN1-201ENST00000317402 EIF4G1Q04637 1599 aaKnown RBP5.08□□□□□ -1.6
GEN1-201ENST00000317402 PLPPR3Q6T4P5 718 aa5.08□□□□□ -1.6
GEN1-201ENST00000317402 KIF21BO75037 1637 aa5.08□□□□□ -1.6
GEN1-201ENST00000317402 ZNF777Q9ULD5 760 aaPredicted RBP5.08□□□□□ -1.6
GEN1-201ENST00000317402 ANO8Q9HCE9 1232 aaPredicted RBP5.08□□□□□ -1.6
GEN1-201ENST00000317402 ANKRD12Q6UB98 2062 aa5.08□□□□□ -1.6
GEN1-201ENST00000317402 NUMA1Q14980 2115 aa5.07□□□□□ -1.6
GEN1-201ENST00000317402 KIF21AQ7Z4S6 1674 aa5.07□□□□□ -1.6
GEN1-201ENST00000317402 NESP48681 1621 aa5.06□□□□□ -1.6
GEN1-201ENST00000317402 AQRO60306 1485 aaKnown RBP eCLIP5.06□□□□□ -1.63e-6■■■■■ 29.5
GEN1-201ENST00000317402 ERICH3Q5RHP9 1530 aa5.06□□□□□ -1.6
GEN1-201ENST00000317402 RBM19Q9Y4C8 960 aaKnown RBP5.06□□□□□ -1.6
GEN1-201ENST00000317402 ANP32EQ9BTT0 268 aa5.05□□□□□ -1.6
GEN1-201ENST00000317402 ZNF644Q9H582 1327 aaPredicted RBP5.05□□□□□ -1.6
GEN1-201ENST00000317402 CACNA1FO60840 1977 aa5.05□□□□□ -1.6
GEN1-201ENST00000317402 CLIP1P30622 1438 aa5.04□□□□□ -1.6
GEN1-201ENST00000317402 NPM2Q86SE8 214 aaKnown RBP5.04□□□□□ -1.6
GEN1-201ENST00000317402 BIVM-ERCC5R4GMW8 1640 aa5.04□□□□□ -1.6
GEN1-201ENST00000317402 MYT1LQ9UL68 1186 aa5.04□□□□□ -1.6
GEN1-201ENST00000317402 DAXXQ9UER7 740 aaPredicted RBP5.04□□□□□ -1.6
GEN1-201ENST00000317402 PLIN1O60240 522 aa5.04□□□□□ -1.6
GEN1-201ENST00000317402 AK9Q5TCS8 1911 aa5.04□□□□□ -1.6
GEN1-201ENST00000317402 IL27Q8NEV9 243 aa5.03□□□□□ -1.6
GEN1-201ENST00000317402 CLSPNQ9HAW4 1339 aa5.03□□□□□ -1.6
GEN1-201ENST00000317402 MYH8P13535 1937 aa5.03□□□□□ -1.6
GEN1-201ENST00000317402 SYNJ1O43426 1573 aa5.03□□□□□ -1.6
GEN1-201ENST00000317402 TDRD9Q8NDG6 1382 aaKnown RBP5.03□□□□□ -1.6
GEN1-201ENST00000317402 RAD54L2Q9Y4B4 1467 aa5.03□□□□□ -1.6
GEN1-201ENST00000317402 HMGB1P09429 215 aaKnown RBP5.03□□□□□ -1.6
GEN1-201ENST00000317402 PODXL2Q9NZ53 605 aa5.02□□□□□ -1.61
GEN1-201ENST00000317402 CCDC88CQ9P219 2028 aa5.02□□□□□ -1.61
GEN1-201ENST00000317402 WRNQ14191 1432 aaPredicted RBP eCLIP5.02□□□□□ -1.61
GEN1-201ENST00000317402 TCHHQ07283 1943 aa5.02□□□□□ -1.61
GEN1-201ENST00000317402 PTPRKQ15262 1439 aa5.02□□□□□ -1.61
GEN1-201ENST00000317402 GOLGA3Q08378 1498 aa5.02□□□□□ -1.61
GEN1-201ENST00000317402 KDM2AQ9Y2K7 1162 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 ARAP1Q96P48 1450 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 PLEKHG5O94827 1062 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 PHLDB1Q86UU1 1377 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 SPAG17Q6Q759 2223 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 MICAL3Q7RTP6 2002 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 ARXQ96QS3 562 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 TOP2BQ02880 1626 aa5.01□□□□□ -1.61
GEN1-201ENST00000317402 NBPF8Q3BBV2 869 aa5□□□□□ -1.61
GEN1-201ENST00000317402 CEP164Q9UPV0 1460 aa5□□□□□ -1.61
GEN1-201ENST00000317402 RAB3GAP2Q9H2M9 1393 aa5□□□□□ -1.61
GEN1-201ENST00000317402 NUTM2DQ5VT03 806 aaPredicted RBP5□□□□□ -1.61
GEN1-201ENST00000317402 LAS1LQ9Y4W2 734 aaKnown RBP5□□□□□ -1.61
GEN1-201ENST00000317402 HNRNPUQ00839 825 aaKnown RBP eCLIP5□□□□□ -1.61
GEN1-201ENST00000317402 NCAPD3P42695 1498 aa5□□□□□ -1.61
GEN1-201ENST00000317402 PPP1R15AO75807 674 aaPredicted RBP4.99□□□□□ -1.61
GEN1-201ENST00000317402 RP1L1Q8IWN7 2480 aaPredicted RBP4.99□□□□□ -1.61
GEN1-201ENST00000317402 NINQ8N4C6 2090 aa4.99□□□□□ -1.61
GEN1-201ENST00000317402 DTNBO60941 627 aa4.99□□□□□ -1.61
GEN1-201ENST00000317402 HSPA5P11021 654 aaKnown RBP4.98□□□□□ -1.61
GEN1-201ENST00000317402 CUL7Q14999 1698 aa4.98□□□□□ -1.61
GEN1-201ENST00000317402 FHOD3Q2V2M9 1422 aa4.98□□□□□ -1.61
GEN1-201ENST00000317402 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.98□□□□□ -1.618e-13■■■■□ 21.9
GEN1-201ENST00000317402 CC2D2AQ9P2K1 1620 aa4.98□□□□□ -1.61
GEN1-201ENST00000317402 TNNQ9UQP3 1299 aa4.98□□□□□ -1.61
GEN1-201ENST00000317402 PDS5BQ9NTI5 1447 aa4.97□□□□□ -1.61
GEN1-201ENST00000317402 CDCA7LQ96GN5 454 aa4.97□□□□□ -1.61
GEN1-201ENST00000317402 TNIKQ9UKE5 1360 aa4.96□□□□□ -1.61
GEN1-201ENST00000317402 ZNF428Q96B54 188 aa4.96□□□□□ -1.61
GEN1-201ENST00000317402 MAP3K1Q13233 1512 aa4.96□□□□□ -1.61
GEN1-201ENST00000317402 RGL3Q3MIN7 710 aa4.96□□□□□ -1.61
GEN1-201ENST00000317402 ICE1Q9Y2F5 2266 aa4.96□□□□□ -1.62
GEN1-201ENST00000317402 CNTRLQ7Z7A1 2325 aa4.96□□□□□ -1.62
GEN1-201ENST00000317402 THOC2Q8NI27 1593 aaKnown RBP4.95□□□□□ -1.62
GEN1-201ENST00000317402 ARID1BQ8NFD5 2236 aaPredicted RBP4.95□□□□□ -1.62
GEN1-201ENST00000317402 MYO7AQ13402 2215 aa4.95□□□□□ -1.62
GEN1-201ENST00000317402 PKNOX2Q96KN3 472 aa4.95□□□□□ -1.62
GEN1-201ENST00000317402 AKNAQ7Z591 1439 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms