RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
CCDC13-201ENST00000310232 CUX2O14529 1486 aa19.2■□□□□ 0.66
CCDC13-201ENST00000310232 PHLDB1Q86UU1 1377 aa19.19■□□□□ 0.66
CCDC13-201ENST00000310232 SETD5Q9C0A6 1442 aa19.13■□□□□ 0.65
CCDC13-201ENST00000310232 PPP1R15AO75807 674 aaPredicted RBP19.13■□□□□ 0.65
CCDC13-201ENST00000310232 IRX6P78412 446 aaPredicted RBP19.12■□□□□ 0.65
CCDC13-201ENST00000310232 RBM19Q9Y4C8 960 aaKnown RBP19.11■□□□□ 0.65
CCDC13-201ENST00000310232 TIAM1Q13009 1591 aa19.09■□□□□ 0.65
CCDC13-201ENST00000310232 IGF1RP08069 1367 aa19.06■□□□□ 0.64
CCDC13-201ENST00000310232 LRRC9Q6ZRR7 1453 aa19.05■□□□□ 0.64
CCDC13-201ENST00000310232 NEFLP07196 543 aa19.04■□□□□ 0.64
CCDC13-201ENST00000310232 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
CCDC13-201ENST00000310232 ANP32CO43423 234 aa19.02■□□□□ 0.64
CCDC13-201ENST00000310232 CARMIL1Q5VZK9 1371 aa18.99■□□□□ 0.63
CCDC13-201ENST00000310232 MSH5O43196 834 aa18.97■□□□□ 0.63
CCDC13-201ENST00000310232 FHOD3Q2V2M9 1422 aa18.97■□□□□ 0.63
CCDC13-201ENST00000310232 PCF11O94913 1555 aaKnown RBP18.96■□□□□ 0.63
CCDC13-201ENST00000310232 CFTRP13569 1480 aa18.95■□□□□ 0.62
CCDC13-201ENST00000310232 HNRNPUQ00839 825 aaKnown RBP eCLIP18.93■□□□□ 0.62
CCDC13-201ENST00000310232 NCAPD3P42695 1498 aa18.91■□□□□ 0.62
CCDC13-201ENST00000310232 TONSLQ96HA7 1378 aa18.9■□□□□ 0.62
CCDC13-201ENST00000310232 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
CCDC13-201ENST00000310232 CCER2I3L3R5 266 aa18.88■□□□□ 0.61
CCDC13-201ENST00000310232 CCDC184Q52MB2 194 aa18.87■□□□□ 0.61
CCDC13-201ENST00000310232 HMGXB3Q12766 1538 aa18.86■□□□□ 0.61
CCDC13-201ENST00000310232 PTPRKQ15262 1439 aa18.85■□□□□ 0.61
CCDC13-201ENST00000310232 CFAP43Q8NDM7 1665 aa18.83■□□□□ 0.6
CCDC13-201ENST00000310232 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
CCDC13-201ENST00000310232 MAP3K1Q13233 1512 aa18.82■□□□□ 0.6
CCDC13-201ENST00000310232 CHIC2Q9UKJ5 165 aa18.81■□□□□ 0.6
CCDC13-201ENST00000310232 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCDC13-201ENST00000310232 RAD54L2Q9Y4B4 1467 aa18.81■□□□□ 0.6
CCDC13-201ENST00000310232 SENP3-EIF4A1A0A087X0R7 540 aa18.81■□□□□ 0.6
CCDC13-201ENST00000310232 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
CCDC13-201ENST00000310232 CCDC18Q5T9S5 1454 aa18.8■□□□□ 0.6
CCDC13-201ENST00000310232 RRP7BPQ9NSQ0 103 aa18.78■□□□□ 0.6
CCDC13-201ENST00000310232 FOXD1Q16676 465 aa18.76■□□□□ 0.59
CCDC13-201ENST00000310232 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
CCDC13-201ENST00000310232 FGD6Q6ZV73 1430 aa18.75■□□□□ 0.59
CCDC13-201ENST00000310232 ARID3CA6NKF2 412 aa18.75■□□□□ 0.59
CCDC13-201ENST00000310232 TIMELESSQ9UNS1 1208 aa18.75■□□□□ 0.59
CCDC13-201ENST00000310232 HSPA5P11021 654 aaKnown RBP18.74■□□□□ 0.59
CCDC13-201ENST00000310232 FAM9BQ8IZU0 186 aa18.73■□□□□ 0.59
CCDC13-201ENST00000310232 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
CCDC13-201ENST00000310232 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
CCDC13-201ENST00000310232 C11orf95C9JLR9 678 aaPredicted RBP18.71■□□□□ 0.59
CCDC13-201ENST00000310232 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
CCDC13-201ENST00000310232 CDK11AQ9UQ88 783 aaPredicted RBP18.7■□□□□ 0.58
CCDC13-201ENST00000310232 PTPN23Q9H3S7 1636 aa18.68■□□□□ 0.58
CCDC13-201ENST00000310232 KDM5BQ9UGL1 1544 aa18.68■□□□□ 0.58
CCDC13-201ENST00000310232 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
CCDC13-201ENST00000310232 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
CCDC13-201ENST00000310232 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
CCDC13-201ENST00000310232 UACAQ9BZF9 1416 aa18.67■□□□□ 0.58
CCDC13-201ENST00000310232 NAIPQ13075 1403 aa18.67■□□□□ 0.58
CCDC13-201ENST00000310232 LRRIQ1Q96JM4 1722 aa18.65■□□□□ 0.58
CCDC13-201ENST00000310232 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
CCDC13-201ENST00000310232 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
CCDC13-201ENST00000310232 NCOA2Q15596 1464 aa18.61■□□□□ 0.57
CCDC13-201ENST00000310232 SNAPC4Q5SXM2 1469 aa18.6■□□□□ 0.57
CCDC13-201ENST00000310232 FANCD2Q9BXW9 1451 aa18.6■□□□□ 0.57
CCDC13-201ENST00000310232 KDM6BO15054 1643 aa18.6■□□□□ 0.57
CCDC13-201ENST00000310232 NESP48681 1621 aa18.6■□□□□ 0.57
CCDC13-201ENST00000310232 DENND4BO75064 1496 aaPredicted RBP18.59■□□□□ 0.57
CCDC13-201ENST00000310232 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
CCDC13-201ENST00000310232 MRS2Q9HD23 443 aa18.59■□□□□ 0.57
CCDC13-201ENST00000310232 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
CCDC13-201ENST00000310232 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
CCDC13-201ENST00000310232 TDRD9Q8NDG6 1382 aaKnown RBP18.57■□□□□ 0.56
CCDC13-201ENST00000310232 EIF4G2P78344 907 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC13-201ENST00000310232 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC13-201ENST00000310232 POLR3GLQ9BT43 218 aa18.56■□□□□ 0.56
CCDC13-201ENST00000310232 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
CCDC13-201ENST00000310232 CTTNBP2Q8WZ74 1663 aa18.55■□□□□ 0.56
CCDC13-201ENST00000310232 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
CCDC13-201ENST00000310232 PPP4R2Q9NY27 417 aa18.54■□□□□ 0.56
CCDC13-201ENST00000310232 NBPF8Q3BBV2 869 aa18.53■□□□□ 0.56
CCDC13-201ENST00000310232 FMN1Q68DA7 1419 aa18.53■□□□□ 0.56
CCDC13-201ENST00000310232 EFCAB5A4FU69 1503 aa18.52■□□□□ 0.56
CCDC13-201ENST00000310232 MAGI3Q5TCQ9 1506 aa18.52■□□□□ 0.56
CCDC13-201ENST00000310232 NBR1Q14596 966 aa18.52■□□□□ 0.56
CCDC13-201ENST00000310232 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
CCDC13-201ENST00000310232 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
CCDC13-201ENST00000310232 CNTLNQ9NXG0 1405 aa18.5■□□□□ 0.55
CCDC13-201ENST00000310232 PAK3O75914 559 aaPredicted RBP18.5■□□□□ 0.55
CCDC13-201ENST00000310232 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
CCDC13-201ENST00000310232 AKNAQ7Z591 1439 aa18.47■□□□□ 0.55
CCDC13-201ENST00000310232 CCDC7Q96M83 1385 aa18.47■□□□□ 0.55
CCDC13-201ENST00000310232 ZNF326Q5BKZ1 582 aaKnown RBP18.46■□□□□ 0.55
CCDC13-201ENST00000310232 SUPT6HQ7KZ85 1726 aaKnown RBP18.45■□□□□ 0.54
CCDC13-201ENST00000310232 DNMBPQ6XZF7 1577 aa18.44■□□□□ 0.54
CCDC13-201ENST00000310232 GRIN2BQ13224 1484 aa18.44■□□□□ 0.54
CCDC13-201ENST00000310232 KIF7Q2M1P5 1343 aa18.43■□□□□ 0.54
CCDC13-201ENST00000310232 DEKP35659 375 aaKnown RBP18.42■□□□□ 0.54
CCDC13-201ENST00000310232 ZNF644Q9H582 1327 aaPredicted RBP18.41■□□□□ 0.54
CCDC13-201ENST00000310232 CC2D2AQ9P2K1 1620 aa18.41■□□□□ 0.54
CCDC13-201ENST00000310232 ZBED9Q6R2W3 1325 aa18.4■□□□□ 0.54
CCDC13-201ENST00000310232 NCOA1Q15788 1441 aa18.4■□□□□ 0.54
CCDC13-201ENST00000310232 CUL7Q14999 1698 aa18.4■□□□□ 0.54
CCDC13-201ENST00000310232 CDK13Q14004 1512 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms