RNA–Protein interactions for RNA: ENST00000309862.10

PGAP3-202, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2

Gene PGAP3, Length 3,028 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-202ENST00000309862 TRIM52Q96A61 297 aa22.01■■□□□ 1.11
PGAP3-202ENST00000309862 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
PGAP3-202ENST00000309862 SETD5Q9C0A6 1442 aa21.97■■□□□ 1.11
PGAP3-202ENST00000309862 PHLDB1Q86UU1 1377 aa21.94■■□□□ 1.1
PGAP3-202ENST00000309862 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
PGAP3-202ENST00000309862 NEFLP07196 543 aa21.9■■□□□ 1.1
PGAP3-202ENST00000309862 IGF1RP08069 1367 aa21.89■■□□□ 1.09
PGAP3-202ENST00000309862 TIAM1Q13009 1591 aa21.86■■□□□ 1.09
PGAP3-202ENST00000309862 ANP32CO43423 234 aa21.85■■□□□ 1.09
PGAP3-202ENST00000309862 LRRC9Q6ZRR7 1453 aa21.85■■□□□ 1.09
PGAP3-202ENST00000309862 RBM19Q9Y4C8 960 aaKnown RBP21.83■■□□□ 1.09
PGAP3-202ENST00000309862 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
PGAP3-202ENST00000309862 CFTRP13569 1480 aa21.79■■□□□ 1.08
PGAP3-202ENST00000309862 NCAPD3P42695 1498 aa21.79■■□□□ 1.08
PGAP3-202ENST00000309862 CCER2I3L3R5 266 aa21.74■■□□□ 1.07
PGAP3-202ENST00000309862 IRX6P78412 446 aaPredicted RBP21.72■■□□□ 1.07
PGAP3-202ENST00000309862 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
PGAP3-202ENST00000309862 MAP3K1Q13233 1512 aa21.7■■□□□ 1.06
PGAP3-202ENST00000309862 TIMELESSQ9UNS1 1208 aa21.7■■□□□ 1.06
PGAP3-202ENST00000309862 FHOD3Q2V2M9 1422 aa21.69■■□□□ 1.06
PGAP3-202ENST00000309862 TONSLQ96HA7 1378 aa21.69■■□□□ 1.06
PGAP3-202ENST00000309862 FHAD1B1AJZ9 1412 aa21.67■■□□□ 1.06
PGAP3-202ENST00000309862 BCL11AQ9H165 835 aa21.67■■□□□ 1.06
PGAP3-202ENST00000309862 PCF11O94913 1555 aaKnown RBP21.65■■□□□ 1.06
PGAP3-202ENST00000309862 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
PGAP3-202ENST00000309862 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
PGAP3-202ENST00000309862 MSH5O43196 834 aa21.59■■□□□ 1.05
PGAP3-202ENST00000309862 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
PGAP3-202ENST00000309862 CFAP43Q8NDM7 1665 aa21.54■■□□□ 1.04
PGAP3-202ENST00000309862 CCDC18Q5T9S5 1454 aa21.53■■□□□ 1.04
PGAP3-202ENST00000309862 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
PGAP3-202ENST00000309862 FGD6Q6ZV73 1430 aa21.51■■□□□ 1.03
PGAP3-202ENST00000309862 MTUS2Q5JR59 1369 aa21.5■■□□□ 1.03
PGAP3-202ENST00000309862 RAD54L2Q9Y4B4 1467 aa21.49■■□□□ 1.03
PGAP3-202ENST00000309862 CHIC2Q9UKJ5 165 aa21.48■■□□□ 1.03
PGAP3-202ENST00000309862 CDK11AQ9UQ88 783 aaPredicted RBP21.48■■□□□ 1.03
PGAP3-202ENST00000309862 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
PGAP3-202ENST00000309862 FYCO1Q9BQS8 1478 aa21.47■■□□□ 1.03
PGAP3-202ENST00000309862 RRP7BPQ9NSQ0 103 aa21.47■■□□□ 1.03
PGAP3-202ENST00000309862 CCDC184Q52MB2 194 aa21.46■■□□□ 1.03
PGAP3-202ENST00000309862 HSPA5P11021 654 aaKnown RBP21.46■■□□□ 1.03
PGAP3-202ENST00000309862 UACAQ9BZF9 1416 aa21.45■■□□□ 1.02
PGAP3-202ENST00000309862 AQRO60306 1485 aaKnown RBP eCLIP21.45■■□□□ 1.02
PGAP3-202ENST00000309862 WASHC2AQ641Q2 1341 aa21.45■■□□□ 1.02
PGAP3-202ENST00000309862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.44■■□□□ 1.02
PGAP3-202ENST00000309862 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
PGAP3-202ENST00000309862 ERICH6Q7L0X2 663 aa21.4■■□□□ 1.02
PGAP3-202ENST00000309862 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
PGAP3-202ENST00000309862 NAIPQ13075 1403 aa21.4■■□□□ 1.02
PGAP3-202ENST00000309862 PTPN23Q9H3S7 1636 aa21.37■■□□□ 1.01
PGAP3-202ENST00000309862 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
PGAP3-202ENST00000309862 FOXD1Q16676 465 aa21.36■■□□□ 1.01
PGAP3-202ENST00000309862 FANCD2Q9BXW9 1451 aa21.35■■□□□ 1.01
PGAP3-202ENST00000309862 FMN1Q68DA7 1419 aa21.35■■□□□ 1.01
PGAP3-202ENST00000309862 CNGB1Q14028 1251 aaPredicted RBP21.35■■□□□ 1.01
PGAP3-202ENST00000309862 EIF4G2P78344 907 aaKnown RBP eCLIP21.34■■□□□ 1.017e-9■■■■□ 20.6
PGAP3-202ENST00000309862 B4GALNT3Q6L9W6 998 aa21.34■■□□□ 1.01
PGAP3-202ENST00000309862 FANCIQ9NVI1 1328 aa21.33■■□□□ 1.01
PGAP3-202ENST00000309862 C11orf95C9JLR9 678 aaPredicted RBP21.33■■□□□ 1.01
PGAP3-202ENST00000309862 EFCAB5A4FU69 1503 aa21.33■■□□□ 1
PGAP3-202ENST00000309862 NCOA2Q15596 1464 aa21.32■■□□□ 1
PGAP3-202ENST00000309862 KDM5BQ9UGL1 1544 aa21.32■■□□□ 1
PGAP3-202ENST00000309862 ARID3CA6NKF2 412 aa21.31■■□□□ 1
PGAP3-202ENST00000309862 SNAPC4Q5SXM2 1469 aa21.3■■□□□ 1
PGAP3-202ENST00000309862 MYOM3Q5VTT5 1437 aa21.3■■□□□ 1
PGAP3-202ENST00000309862 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
PGAP3-202ENST00000309862 MRS2Q9HD23 443 aa21.29■■□□□ 1
PGAP3-202ENST00000309862 PPP4R2Q9NY27 417 aa21.29■■□□□ 1
PGAP3-202ENST00000309862 L3MBTL2Q969R5 705 aa21.29■■□□□ 1
PGAP3-202ENST00000309862 ABCA10Q8WWZ4 1543 aa21.26■□□□□ 0.99
PGAP3-202ENST00000309862 TDRD9Q8NDG6 1382 aaKnown RBP21.26■□□□□ 0.99
PGAP3-202ENST00000309862 SENP3-EIF4A1A0A087X0R7 540 aa21.25■□□□□ 0.99
PGAP3-202ENST00000309862 PRKRIP1Q9H875 184 aaPredicted RBP21.25■□□□□ 0.99
PGAP3-202ENST00000309862 TOPBP1Q92547 1522 aa21.23■□□□□ 0.99
PGAP3-202ENST00000309862 MPHOSPH9Q99550 1183 aa21.23■□□□□ 0.99
PGAP3-202ENST00000309862 NESP48681 1621 aa21.21■□□□□ 0.99
PGAP3-202ENST00000309862 CNTLNQ9NXG0 1405 aa21.21■□□□□ 0.99
PGAP3-202ENST00000309862 DENND4BO75064 1496 aaPredicted RBP21.2■□□□□ 0.98
PGAP3-202ENST00000309862 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
PGAP3-202ENST00000309862 DNMBPQ6XZF7 1577 aa21.19■□□□□ 0.98
PGAP3-202ENST00000309862 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
PGAP3-202ENST00000309862 NBPF8Q3BBV2 869 aa21.18■□□□□ 0.98
PGAP3-202ENST00000309862 CCDC7Q96M83 1385 aa21.18■□□□□ 0.98
PGAP3-202ENST00000309862 POLR3GLQ9BT43 218 aa21.17■□□□□ 0.98
PGAP3-202ENST00000309862 ERICH6BQ5W0A0 696 aa21.16■□□□□ 0.98
PGAP3-202ENST00000309862 GRIN2BQ13224 1484 aa21.16■□□□□ 0.98
PGAP3-202ENST00000309862 KDM6BO15054 1643 aa21.15■□□□□ 0.98
PGAP3-202ENST00000309862 CC2D2AQ9P2K1 1620 aa21.14■□□□□ 0.98
PGAP3-202ENST00000309862 CUL7Q14999 1698 aa21.14■□□□□ 0.97
PGAP3-202ENST00000309862 SUPT6HQ7KZ85 1726 aaKnown RBP21.13■□□□□ 0.97
PGAP3-202ENST00000309862 MAGI3Q5TCQ9 1506 aa21.13■□□□□ 0.97
PGAP3-202ENST00000309862 ZBED9Q6R2W3 1325 aa21.13■□□□□ 0.97
PGAP3-202ENST00000309862 KIF7Q2M1P5 1343 aa21.11■□□□□ 0.97
PGAP3-202ENST00000309862 NCOA1Q15788 1441 aa21.1■□□□□ 0.97
PGAP3-202ENST00000309862 EHBP1L1Q8N3D4 1523 aa21.09■□□□□ 0.97
PGAP3-202ENST00000309862 UGGT2Q9NYU1 1516 aa21.09■□□□□ 0.97
PGAP3-202ENST00000309862 NBR1Q14596 966 aa21.09■□□□□ 0.97
PGAP3-202ENST00000309862 ZNF326Q5BKZ1 582 aaKnown RBP21.07■□□□□ 0.96
PGAP3-202ENST00000309862 SAMD9Q5K651 1589 aa21.07■□□□□ 0.96
PGAP3-202ENST00000309862 AKNAQ7Z591 1439 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms