RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 P3H3Q8IVL6 736 aa20.44■□□□□ 0.86
SCUBE2-201ENST00000309263 ERCC6Q03468 1493 aa20.44■□□□□ 0.86
SCUBE2-201ENST00000309263 CUX1P39880 1505 aa20.42■□□□□ 0.86
SCUBE2-201ENST00000309263 IRX6P78412 446 aaPredicted RBP20.38■□□□□ 0.85
SCUBE2-201ENST00000309263 TOP2BQ02880 1626 aa20.37■□□□□ 0.85
SCUBE2-201ENST00000309263 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
SCUBE2-201ENST00000309263 KIF21AQ7Z4S6 1674 aa20.36■□□□□ 0.85
SCUBE2-201ENST00000309263 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
SCUBE2-201ENST00000309263 ANP32CO43423 234 aa20.33■□□□□ 0.85
SCUBE2-201ENST00000309263 RAB3GAP2Q9H2M9 1393 aa20.33■□□□□ 0.84
SCUBE2-201ENST00000309263 RBM19Q9Y4C8 960 aaKnown RBP20.32■□□□□ 0.84
SCUBE2-201ENST00000309263 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
SCUBE2-201ENST00000309263 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
SCUBE2-201ENST00000309263 BIVM-ERCC5R4GMW8 1640 aa20.3■□□□□ 0.84
SCUBE2-201ENST00000309263 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
SCUBE2-201ENST00000309263 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
SCUBE2-201ENST00000309263 ERICH6Q7L0X2 663 aa20.28■□□□□ 0.84
SCUBE2-201ENST00000309263 ARID3CA6NKF2 412 aa20.28■□□□□ 0.84
SCUBE2-201ENST00000309263 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
SCUBE2-201ENST00000309263 ARAP1Q96P48 1450 aa20.27■□□□□ 0.84
SCUBE2-201ENST00000309263 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
SCUBE2-201ENST00000309263 HNRNPUQ00839 825 aaKnown RBP eCLIP20.2■□□□□ 0.82
SCUBE2-201ENST00000309263 RAD54L2Q9Y4B4 1467 aa20.19■□□□□ 0.82
SCUBE2-201ENST00000309263 CUX2O14529 1486 aa20.17■□□□□ 0.82
SCUBE2-201ENST00000309263 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
SCUBE2-201ENST00000309263 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
SCUBE2-201ENST00000309263 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
SCUBE2-201ENST00000309263 SETD5Q9C0A6 1442 aa20.11■□□□□ 0.81
SCUBE2-201ENST00000309263 WDR62O43379 1518 aa20.09■□□□□ 0.81
SCUBE2-201ENST00000309263 PPP1R15AO75807 674 aaPredicted RBP20.09■□□□□ 0.81
SCUBE2-201ENST00000309263 CDK11AQ9UQ88 783 aaPredicted RBP20.09■□□□□ 0.81
SCUBE2-201ENST00000309263 TDRD9Q8NDG6 1382 aaKnown RBP20.09■□□□□ 0.81
SCUBE2-201ENST00000309263 WDR97A6NE52 1622 aa20.08■□□□□ 0.81
SCUBE2-201ENST00000309263 PRXQ9BXM0 1461 aa20.08■□□□□ 0.81
SCUBE2-201ENST00000309263 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
SCUBE2-201ENST00000309263 THOC2Q8NI27 1593 aaKnown RBP20.06■□□□□ 0.8
SCUBE2-201ENST00000309263 ARHGAP35Q9NRY4 1499 aa20.05■□□□□ 0.8
SCUBE2-201ENST00000309263 ABCA10Q8WWZ4 1543 aa20.04■□□□□ 0.8
SCUBE2-201ENST00000309263 POLR3GLQ9BT43 218 aa20.03■□□□□ 0.8
SCUBE2-201ENST00000309263 PHLDB1Q86UU1 1377 aa20.03■□□□□ 0.8
SCUBE2-201ENST00000309263 MSH5O43196 834 aa20.01■□□□□ 0.79
SCUBE2-201ENST00000309263 MAPKBP1O60336 1514 aa20■□□□□ 0.79
SCUBE2-201ENST00000309263 FAM9BQ8IZU0 186 aa20■□□□□ 0.79
SCUBE2-201ENST00000309263 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
SCUBE2-201ENST00000309263 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
SCUBE2-201ENST00000309263 IGF1RP08069 1367 aa19.98■□□□□ 0.79
SCUBE2-201ENST00000309263 AQRO60306 1485 aaKnown RBP eCLIP19.96■□□□□ 0.79
SCUBE2-201ENST00000309263 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
SCUBE2-201ENST00000309263 GAPVD1Q14C86 1478 aa19.95■□□□□ 0.78
SCUBE2-201ENST00000309263 CHIC2Q9UKJ5 165 aa19.95■□□□□ 0.78
SCUBE2-201ENST00000309263 TARBP1Q13395 1621 aaKnown RBP19.94■□□□□ 0.78
SCUBE2-201ENST00000309263 CARMIL1Q5VZK9 1371 aa19.92■□□□□ 0.78
SCUBE2-201ENST00000309263 B4GALNT3Q6L9W6 998 aa19.92■□□□□ 0.78
SCUBE2-201ENST00000309263 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
SCUBE2-201ENST00000309263 NBR1Q14596 966 aa19.89■□□□□ 0.77
SCUBE2-201ENST00000309263 RRP7BPQ9NSQ0 103 aa19.88■□□□□ 0.77
SCUBE2-201ENST00000309263 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
SCUBE2-201ENST00000309263 FHOD3Q2V2M9 1422 aa19.83■□□□□ 0.77
SCUBE2-201ENST00000309263 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.77
SCUBE2-201ENST00000309263 CCDC184Q52MB2 194 aa19.83■□□□□ 0.76
SCUBE2-201ENST00000309263 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
SCUBE2-201ENST00000309263 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
SCUBE2-201ENST00000309263 GRIN2BQ13224 1484 aa19.82■□□□□ 0.76
SCUBE2-201ENST00000309263 FBLN2P98095 1184 aa19.81■□□□□ 0.76
SCUBE2-201ENST00000309263 HSPA5P11021 654 aaKnown RBP19.81■□□□□ 0.76
SCUBE2-201ENST00000309263 FOXD1Q16676 465 aa19.79■□□□□ 0.76
SCUBE2-201ENST00000309263 MTUS2Q5JR59 1369 aa19.79■□□□□ 0.76
SCUBE2-201ENST00000309263 TIAM1Q13009 1591 aa19.78■□□□□ 0.76
SCUBE2-201ENST00000309263 EIF4G3O43432 1585 aaKnown RBP19.76■□□□□ 0.75
SCUBE2-201ENST00000309263 CHMP7Q8WUX9 453 aaPredicted RBP19.75■□□□□ 0.75
SCUBE2-201ENST00000309263 PPP4R2Q9NY27 417 aa19.75■□□□□ 0.75
SCUBE2-201ENST00000309263 FHAD1B1AJZ9 1412 aa19.74■□□□□ 0.75
SCUBE2-201ENST00000309263 ZNF326Q5BKZ1 582 aaKnown RBP19.74■□□□□ 0.75
SCUBE2-201ENST00000309263 EIF4G2P78344 907 aaKnown RBP eCLIP19.74■□□□□ 0.75
SCUBE2-201ENST00000309263 CUL7Q14999 1698 aa19.72■□□□□ 0.75
SCUBE2-201ENST00000309263 SNAPC4Q5SXM2 1469 aa19.72■□□□□ 0.75
SCUBE2-201ENST00000309263 WASHC2AQ641Q2 1341 aa19.72■□□□□ 0.75
SCUBE2-201ENST00000309263 PBRM1Q86U86 1689 aa19.71■□□□□ 0.75
SCUBE2-201ENST00000309263 FANCIQ9NVI1 1328 aa19.7■□□□□ 0.74
SCUBE2-201ENST00000309263 DEKP35659 375 aaKnown RBP19.7■□□□□ 0.74
SCUBE2-201ENST00000309263 CCDC18Q5T9S5 1454 aa19.68■□□□□ 0.74
SCUBE2-201ENST00000309263 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
SCUBE2-201ENST00000309263 NPM2Q86SE8 214 aaKnown RBP19.63■□□□□ 0.73
SCUBE2-201ENST00000309263 ADAMTS12P58397 1594 aa19.63■□□□□ 0.73
SCUBE2-201ENST00000309263 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
SCUBE2-201ENST00000309263 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
SCUBE2-201ENST00000309263 SALL2Q9Y467 1007 aaPredicted RBP19.62■□□□□ 0.73
SCUBE2-201ENST00000309263 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
SCUBE2-201ENST00000309263 PCF11O94913 1555 aaKnown RBP19.6■□□□□ 0.73
SCUBE2-201ENST00000309263 FGD6Q6ZV73 1430 aa19.6■□□□□ 0.73
SCUBE2-201ENST00000309263 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
SCUBE2-201ENST00000309263 NOP58Q9Y2X3 529 aaKnown RBP19.59■□□□□ 0.73
SCUBE2-201ENST00000309263 PAK3O75914 559 aaPredicted RBP19.59■□□□□ 0.73
SCUBE2-201ENST00000309263 SYNJ2O15056 1496 aa19.58■□□□□ 0.73
SCUBE2-201ENST00000309263 PTPRKQ15262 1439 aa19.58■□□□□ 0.72
SCUBE2-201ENST00000309263 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
SCUBE2-201ENST00000309263 GRIN2AQ12879 1464 aa19.56■□□□□ 0.72
SCUBE2-201ENST00000309263 UACAQ9BZF9 1416 aa19.55■□□□□ 0.72
SCUBE2-201ENST00000309263 ANP32AP39687 249 aaKnown RBP19.55■□□□□ 0.72
SCUBE2-201ENST00000309263 MPHOSPH9Q99550 1183 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms