RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 ATP1B4Q9UN42 357 aaPredicted RBP26.82■■□□□ 1.88
RAPH1-201ENST00000308091 FAM50AQ14320 339 aaKnown RBP26.8■■□□□ 1.88
RAPH1-201ENST00000308091 PHLDB1Q86UU1 1377 aa26.8■■□□□ 1.88
RAPH1-201ENST00000308091 BCANQ96GW7 911 aa26.79■■□□□ 1.88
RAPH1-201ENST00000308091 MAPKBP1O60336 1514 aa26.79■■□□□ 1.88
RAPH1-201ENST00000308091 LRRC9Q6ZRR7 1453 aa26.76■■□□□ 1.87
RAPH1-201ENST00000308091 KCNH8Q96L42 1107 aa26.76■■□□□ 1.87
RAPH1-201ENST00000308091 PRDM2Q13029 1718 aa26.75■■□□□ 1.87
RAPH1-201ENST00000308091 SIN3AQ96ST3 1273 aa26.74■■□□□ 1.87
RAPH1-201ENST00000308091 SETD5Q9C0A6 1442 aa26.72■■□□□ 1.87
RAPH1-201ENST00000308091 MAP3K1Q13233 1512 aa26.68■■□□□ 1.86
RAPH1-201ENST00000308091 FHOD3Q2V2M9 1422 aa26.64■■□□□ 1.86
RAPH1-201ENST00000308091 PCF11O94913 1555 aaKnown RBP26.64■■□□□ 1.86
RAPH1-201ENST00000308091 FHAD1B1AJZ9 1412 aa26.63■■□□□ 1.85
RAPH1-201ENST00000308091 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
RAPH1-201ENST00000308091 WDR97A6NE52 1622 aa26.6■■□□□ 1.85
RAPH1-201ENST00000308091 DDX10Q13206 875 aaKnown RBP26.59■■□□□ 1.85
RAPH1-201ENST00000308091 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
RAPH1-201ENST00000308091 HIRIP3Q9BW71 556 aaPredicted RBP26.58■■□□□ 1.85
RAPH1-201ENST00000308091 CFAP43Q8NDM7 1665 aa26.53■■□□□ 1.84
RAPH1-201ENST00000308091 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
RAPH1-201ENST00000308091 POLA1P09884 1462 aaPredicted RBP26.47■■□□□ 1.83
RAPH1-201ENST00000308091 NESP48681 1621 aa26.45■■□□□ 1.83
RAPH1-201ENST00000308091 FYCO1Q9BQS8 1478 aa26.43■■□□□ 1.82
RAPH1-201ENST00000308091 ABCA10Q8WWZ4 1543 aa26.43■■□□□ 1.82
RAPH1-201ENST00000308091 TOPBP1Q92547 1522 aa26.43■■□□□ 1.82
RAPH1-201ENST00000308091 FKBP8Q14318 412 aa26.43■■□□□ 1.82
RAPH1-201ENST00000308091 CASKIN1Q8WXD9 1431 aa26.42■■□□□ 1.82
RAPH1-201ENST00000308091 DNMBPQ6XZF7 1577 aa26.42■■□□□ 1.82
RAPH1-201ENST00000308091 PPP1R15AO75807 674 aaPredicted RBP26.4■■□□□ 1.82
RAPH1-201ENST00000308091 EFCAB5A4FU69 1503 aa26.36■■□□□ 1.81
RAPH1-201ENST00000308091 FGD6Q6ZV73 1430 aa26.34■■□□□ 1.81
RAPH1-201ENST00000308091 MTUS2Q5JR59 1369 aa26.32■■□□□ 1.8
RAPH1-201ENST00000308091 TIMELESSQ9UNS1 1208 aa26.31■■□□□ 1.8
RAPH1-201ENST00000308091 AQRO60306 1485 aaKnown RBP eCLIP26.31■■□□□ 1.8
RAPH1-201ENST00000308091 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
RAPH1-201ENST00000308091 TDRD9Q8NDG6 1382 aaKnown RBP26.3■■□□□ 1.8
RAPH1-201ENST00000308091 RBM19Q9Y4C8 960 aaKnown RBP26.29■■□□□ 1.8
RAPH1-201ENST00000308091 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
RAPH1-201ENST00000308091 SNAPC4Q5SXM2 1469 aa26.28■■□□□ 1.8
RAPH1-201ENST00000308091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.28■■□□□ 1.8
RAPH1-201ENST00000308091 CTTNBP2Q8WZ74 1663 aa26.27■■□□□ 1.8
RAPH1-201ENST00000308091 TRIM52Q96A61 297 aa26.27■■□□□ 1.8
RAPH1-201ENST00000308091 TONSLQ96HA7 1378 aa26.27■■□□□ 1.8
RAPH1-201ENST00000308091 CUL7Q14999 1698 aa26.27■■□□□ 1.8
RAPH1-201ENST00000308091 CCDC18Q5T9S5 1454 aa26.26■■□□□ 1.8
RAPH1-201ENST00000308091 ANP32CO43423 234 aa26.22■■□□□ 1.79
RAPH1-201ENST00000308091 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
RAPH1-201ENST00000308091 HFM1A2PYH4 1435 aa26.18■■□□□ 1.78
RAPH1-201ENST00000308091 NCOA2Q15596 1464 aa26.17■■□□□ 1.78
RAPH1-201ENST00000308091 UACAQ9BZF9 1416 aa26.16■■□□□ 1.78
RAPH1-201ENST00000308091 LRRIQ1Q96JM4 1722 aa26.15■■□□□ 1.78
RAPH1-201ENST00000308091 PTPN23Q9H3S7 1636 aa26.15■■□□□ 1.78
RAPH1-201ENST00000308091 NAIPQ13075 1403 aa26.14■■□□□ 1.78
RAPH1-201ENST00000308091 MYOM3Q5VTT5 1437 aa26.13■■□□□ 1.77
RAPH1-201ENST00000308091 CCER2I3L3R5 266 aa26.12■■□□□ 1.77
RAPH1-201ENST00000308091 CHIC2Q9UKJ5 165 aa26.12■■□□□ 1.77
RAPH1-201ENST00000308091 RRP7BPQ9NSQ0 103 aa26.12■■□□□ 1.77
RAPH1-201ENST00000308091 MSH5O43196 834 aa26.12■■□□□ 1.77
RAPH1-201ENST00000308091 GAPVD1Q14C86 1478 aa26.11■■□□□ 1.77
RAPH1-201ENST00000308091 GRIN2BQ13224 1484 aa26.1■■□□□ 1.77
RAPH1-201ENST00000308091 SAMD9Q5K651 1589 aa26.1■■□□□ 1.77
RAPH1-201ENST00000308091 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
RAPH1-201ENST00000308091 NEFLP07196 543 aa26.07■■□□□ 1.76
RAPH1-201ENST00000308091 ABCA5Q8WWZ7 1642 aa26.06■■□□□ 1.76
RAPH1-201ENST00000308091 ARID3CA6NKF2 412 aa26.06■■□□□ 1.76
RAPH1-201ENST00000308091 MAGI3Q5TCQ9 1506 aa26.03■■□□□ 1.76
RAPH1-201ENST00000308091 SUPT6HQ7KZ85 1726 aaKnown RBP26.01■■□□□ 1.75
RAPH1-201ENST00000308091 KDM5BQ9UGL1 1544 aa25.99■■□□□ 1.75
RAPH1-201ENST00000308091 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
RAPH1-201ENST00000308091 EHBP1L1Q8N3D4 1523 aa25.99■■□□□ 1.75
RAPH1-201ENST00000308091 UGGT2Q9NYU1 1516 aa25.96■■□□□ 1.75
RAPH1-201ENST00000308091 IRX6P78412 446 aaPredicted RBP25.94■■□□□ 1.74
RAPH1-201ENST00000308091 HSPA5P11021 654 aaKnown RBP25.93■■□□□ 1.74
RAPH1-201ENST00000308091 FOXD1Q16676 465 aa25.93■■□□□ 1.74
RAPH1-201ENST00000308091 THOC2Q8NI27 1593 aaKnown RBP25.92■■□□□ 1.74
RAPH1-201ENST00000308091 DENND4BO75064 1496 aaPredicted RBP25.91■■□□□ 1.74
RAPH1-201ENST00000308091 WASHC2AQ641Q2 1341 aa25.91■■□□□ 1.74
RAPH1-201ENST00000308091 PDS5BQ9NTI5 1447 aa25.9■■□□□ 1.74
RAPH1-201ENST00000308091 HNRNPUQ00839 825 aaKnown RBP eCLIP25.9■■□□□ 1.74
RAPH1-201ENST00000308091 ARHGEF11O15085 1522 aa25.9■■□□□ 1.74
RAPH1-201ENST00000308091 KDM6BO15054 1643 aa25.89■■□□□ 1.74
RAPH1-201ENST00000308091 ERICH6Q7L0X2 663 aa25.89■■□□□ 1.74
RAPH1-201ENST00000308091 CDK13Q14004 1512 aaKnown RBP25.86■■□□□ 1.73
RAPH1-201ENST00000308091 MPHOSPH9Q99550 1183 aa25.84■■□□□ 1.73
RAPH1-201ENST00000308091 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
RAPH1-201ENST00000308091 EPRSP07814 1512 aaKnown RBP25.83■■□□□ 1.72
RAPH1-201ENST00000308091 TCOF1Q13428 1488 aaKnown RBP25.82■■□□□ 1.72
RAPH1-201ENST00000308091 L3MBTL2Q969R5 705 aa25.82■■□□□ 1.72
RAPH1-201ENST00000308091 TARBP1Q13395 1621 aaKnown RBP25.81■■□□□ 1.72
RAPH1-201ENST00000308091 EIF4G2P78344 907 aaKnown RBP eCLIP25.8■■□□□ 1.72
RAPH1-201ENST00000308091 CCDC184Q52MB2 194 aa25.79■■□□□ 1.72
RAPH1-201ENST00000308091 HECW1Q76N89 1606 aa25.79■■□□□ 1.72
RAPH1-201ENST00000308091 C11orf95C9JLR9 678 aaPredicted RBP25.78■■□□□ 1.72
RAPH1-201ENST00000308091 GCC2Q8IWJ2 1684 aa25.77■■□□□ 1.72
RAPH1-201ENST00000308091 PRKCSHP14314 528 aaPredicted RBP25.77■■□□□ 1.72
RAPH1-201ENST00000308091 IQGAP2Q13576 1575 aa25.75■■□□□ 1.71
RAPH1-201ENST00000308091 ZNF644Q9H582 1327 aaPredicted RBP25.73■■□□□ 1.71
RAPH1-201ENST00000308091 AKNAQ7Z591 1439 aa25.7■■□□□ 1.7
RAPH1-201ENST00000308091 MIA2Q96PC5 1412 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms