RNA–Protein interactions for RNA: ENST00000304449.5

NKRF-201, Transcript of NFKB repressing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKRF, Length 3,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-201ENST00000304449 CADPSQ9ULU8 1353 aa11.57□□□□□ -0.56
NKRF-201ENST00000304449 FGD5Q6ZNL6 1462 aa11.56□□□□□ -0.56
NKRF-201ENST00000304449 LRRC9Q6ZRR7 1453 aa11.55□□□□□ -0.56
NKRF-201ENST00000304449 PCF11O94913 1555 aaKnown RBP11.52□□□□□ -0.57
NKRF-201ENST00000304449 CARMIL1Q5VZK9 1371 aa11.52□□□□□ -0.57
NKRF-201ENST00000304449 PHLDB1Q86UU1 1377 aa11.51□□□□□ -0.57
NKRF-201ENST00000304449 RAB3GAP2Q9H2M9 1393 aa11.51□□□□□ -0.57
NKRF-201ENST00000304449 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
NKRF-201ENST00000304449 WDR97A6NE52 1622 aa11.48□□□□□ -0.57
NKRF-201ENST00000304449 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
NKRF-201ENST00000304449 CC2D2AQ9P2K1 1620 aa11.47□□□□□ -0.57
NKRF-201ENST00000304449 AQRO60306 1485 aaKnown RBP eCLIP11.47□□□□□ -0.57
NKRF-201ENST00000304449 SETD5Q9C0A6 1442 aa11.46□□□□□ -0.57
NKRF-201ENST00000304449 CTTNBP2Q8WZ74 1663 aa11.46□□□□□ -0.57
NKRF-201ENST00000304449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.46□□□□□ -0.58
NKRF-201ENST00000304449 EFCAB5A4FU69 1503 aa11.46□□□□□ -0.58
NKRF-201ENST00000304449 FANCD2Q9BXW9 1451 aa11.45□□□□□ -0.58
NKRF-201ENST00000304449 CUL7Q14999 1698 aa11.45□□□□□ -0.58
NKRF-201ENST00000304449 FHAD1B1AJZ9 1412 aa11.45□□□□□ -0.58
NKRF-201ENST00000304449 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
NKRF-201ENST00000304449 LRRIQ1Q96JM4 1722 aa11.44□□□□□ -0.58
NKRF-201ENST00000304449 POLA1P09884 1462 aaPredicted RBP11.43□□□□□ -0.58
NKRF-201ENST00000304449 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
NKRF-201ENST00000304449 CASKIN1Q8WXD9 1431 aa11.43□□□□□ -0.58
NKRF-201ENST00000304449 SNAPC4Q5SXM2 1469 aa11.43□□□□□ -0.58
NKRF-201ENST00000304449 RAD54L2Q9Y4B4 1467 aa11.41□□□□□ -0.58
NKRF-201ENST00000304449 SAMD9Q5K651 1589 aa11.41□□□□□ -0.58
NKRF-201ENST00000304449 ITGAEP38570 1179 aa11.41□□□□□ -0.58
NKRF-201ENST00000304449 FKBP8Q14318 412 aa11.41□□□□□ -0.58
NKRF-201ENST00000304449 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
NKRF-201ENST00000304449 KCNH8Q96L42 1107 aa11.39□□□□□ -0.59
NKRF-201ENST00000304449 FHOD3Q2V2M9 1422 aa11.38□□□□□ -0.59
NKRF-201ENST00000304449 KDM5BQ9UGL1 1544 aa11.36□□□□□ -0.59
NKRF-201ENST00000304449 TIMELESSQ9UNS1 1208 aa11.36□□□□□ -0.59
NKRF-201ENST00000304449 ARHGEF11O15085 1522 aa11.35□□□□□ -0.59
NKRF-201ENST00000304449 URB2Q14146 1524 aaKnown RBP11.35□□□□□ -0.59
NKRF-201ENST00000304449 NESP48681 1621 aa11.34□□□□□ -0.59
NKRF-201ENST00000304449 PTPRKQ15262 1439 aa11.34□□□□□ -0.59
NKRF-201ENST00000304449 PPP1R15AO75807 674 aaPredicted RBP11.34□□□□□ -0.59
NKRF-201ENST00000304449 RBM19Q9Y4C8 960 aaKnown RBP11.34□□□□□ -0.59
NKRF-201ENST00000304449 GRIN2BQ13224 1484 aa11.33□□□□□ -0.6
NKRF-201ENST00000304449 THOC2Q8NI27 1593 aaKnown RBP11.33□□□□□ -0.6
NKRF-201ENST00000304449 PRKCSHP14314 528 aaPredicted RBP11.33□□□□□ -0.6
NKRF-201ENST00000304449 FGD6Q6ZV73 1430 aa11.33□□□□□ -0.6
NKRF-201ENST00000304449 LAMC3Q9Y6N6 1575 aa11.32□□□□□ -0.6
NKRF-201ENST00000304449 ERICH6Q7L0X2 663 aa11.32□□□□□ -0.6
NKRF-201ENST00000304449 PTPN23Q9H3S7 1636 aa11.32□□□□□ -0.6
NKRF-201ENST00000304449 SIN3AQ96ST3 1273 aa11.32□□□□□ -0.6
NKRF-201ENST00000304449 HFM1A2PYH4 1435 aa11.31□□□□□ -0.6
NKRF-201ENST00000304449 FMN1Q68DA7 1419 aa11.31□□□□□ -0.6
NKRF-201ENST00000304449 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
NKRF-201ENST00000304449 NEFLP07196 543 aa11.29□□□□□ -0.6
NKRF-201ENST00000304449 MAGI3Q5TCQ9 1506 aa11.28□□□□□ -0.6
NKRF-201ENST00000304449 DENND4BO75064 1496 aaPredicted RBP11.28□□□□□ -0.6
NKRF-201ENST00000304449 TARBP1Q13395 1621 aaKnown RBP11.28□□□□□ -0.6
NKRF-201ENST00000304449 UACAQ9BZF9 1416 aa11.27□□□□□ -0.6
NKRF-201ENST00000304449 UGGT2Q9NYU1 1516 aa11.27□□□□□ -0.61
NKRF-201ENST00000304449 NAIPQ13075 1403 aa11.27□□□□□ -0.61
NKRF-201ENST00000304449 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
NKRF-201ENST00000304449 CCDC18Q5T9S5 1454 aa11.26□□□□□ -0.61
NKRF-201ENST00000304449 SUPT6HQ7KZ85 1726 aaKnown RBP11.26□□□□□ -0.61
NKRF-201ENST00000304449 TRIM52Q96A61 297 aa11.26□□□□□ -0.61
NKRF-201ENST00000304449 TCOF1Q13428 1488 aaKnown RBP11.25□□□□□ -0.61
NKRF-201ENST00000304449 NCOA2Q15596 1464 aa11.25□□□□□ -0.61
NKRF-201ENST00000304449 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
NKRF-201ENST00000304449 GCC2Q8IWJ2 1684 aa11.25□□□□□ -0.61
NKRF-201ENST00000304449 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
NKRF-201ENST00000304449 MYOM3Q5VTT5 1437 aa11.24□□□□□ -0.61
NKRF-201ENST00000304449 GAPVD1Q14C86 1478 aa11.23□□□□□ -0.61
NKRF-201ENST00000304449 MSH5O43196 834 aa11.22□□□□□ -0.61
NKRF-201ENST00000304449 HECW1Q76N89 1606 aa11.22□□□□□ -0.61
NKRF-201ENST00000304449 CCER2I3L3R5 266 aa11.21□□□□□ -0.62
NKRF-201ENST00000304449 IRX6P78412 446 aaPredicted RBP11.21□□□□□ -0.62
NKRF-201ENST00000304449 DDX10Q13206 875 aaKnown RBP11.2□□□□□ -0.62
NKRF-201ENST00000304449 PBRM1Q86U86 1689 aa11.2□□□□□ -0.62
NKRF-201ENST00000304449 KDM6BO15054 1643 aa11.2□□□□□ -0.62
NKRF-201ENST00000304449 AKNAQ7Z591 1439 aa11.2□□□□□ -0.62
NKRF-201ENST00000304449 TDRD9Q8NDG6 1382 aaKnown RBP11.19□□□□□ -0.62
NKRF-201ENST00000304449 HIRIP3Q9BW71 556 aaPredicted RBP11.18□□□□□ -0.62
NKRF-201ENST00000304449 MTUS2Q5JR59 1369 aa11.17□□□□□ -0.62
NKRF-201ENST00000304449 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
NKRF-201ENST00000304449 WDR62O43379 1518 aa11.15□□□□□ -0.62
NKRF-201ENST00000304449 PDS5BQ9NTI5 1447 aa11.14□□□□□ -0.63
NKRF-201ENST00000304449 EPRSP07814 1512 aaKnown RBP11.14□□□□□ -0.63
NKRF-201ENST00000304449 IQGAP2Q13576 1575 aa11.13□□□□□ -0.63
NKRF-201ENST00000304449 NBR1Q14596 966 aa11.13□□□□□ -0.63
NKRF-201ENST00000304449 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
NKRF-201ENST00000304449 MIA2Q96PC5 1412 aa11.12□□□□□ -0.63
NKRF-201ENST00000304449 TONSLQ96HA7 1378 aa11.12□□□□□ -0.63
NKRF-201ENST00000304449 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
NKRF-201ENST00000304449 DEKP35659 375 aaKnown RBP11.11□□□□□ -0.63
NKRF-201ENST00000304449 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
NKRF-201ENST00000304449 DNAJC5BQ9UF47 199 aa11.1□□□□□ -0.63
NKRF-201ENST00000304449 POLR1AO95602 1720 aaPredicted RBP11.09□□□□□ -0.63
NKRF-201ENST00000304449 CDK11AQ9UQ88 783 aaPredicted RBP11.09□□□□□ -0.63
NKRF-201ENST00000304449 CDK13Q14004 1512 aaKnown RBP11.09□□□□□ -0.63
NKRF-201ENST00000304449 DNMT1P26358 1616 aaKnown RBP11.08□□□□□ -0.64
NKRF-201ENST00000304449 WASHC2AQ641Q2 1341 aa11.07□□□□□ -0.64
NKRF-201ENST00000304449 ANP32CO43423 234 aa11.07□□□□□ -0.64
NKRF-201ENST00000304449 DISP1Q96F81 1524 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms