RNA–Protein interactions for RNA: ENST00000301050.6

CACNB3-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNB3, Length 2,696 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-201ENST00000301050 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.3
CACNB3-201ENST00000301050 CARMIL1Q5VZK9 1371 aa23.19■■□□□ 1.3
CACNB3-201ENST00000301050 ABCA10Q8WWZ4 1543 aa23.18■■□□□ 1.3
CACNB3-201ENST00000301050 APLP2Q06481 763 aa23.12■■□□□ 1.29
CACNB3-201ENST00000301050 ARHGAP35Q9NRY4 1499 aa23.09■■□□□ 1.29
CACNB3-201ENST00000301050 WDR97A6NE52 1622 aa23.08■■□□□ 1.29
CACNB3-201ENST00000301050 TDRD9Q8NDG6 1382 aaKnown RBP23.02■■□□□ 1.28
CACNB3-201ENST00000301050 CUL7Q14999 1698 aa22.99■■□□□ 1.27
CACNB3-201ENST00000301050 HNRNPUL2Q1KMD3 747 aaKnown RBP22.98■■□□□ 1.27
CACNB3-201ENST00000301050 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
CACNB3-201ENST00000301050 GAPVD1Q14C86 1478 aa22.94■■□□□ 1.26
CACNB3-201ENST00000301050 KANK4Q5T7N3 995 aaPredicted RBP22.93■■□□□ 1.26
CACNB3-201ENST00000301050 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
CACNB3-201ENST00000301050 MRC2Q9UBG0 1479 aa22.91■■□□□ 1.26
CACNB3-201ENST00000301050 P3H3Q8IVL6 736 aa22.88■■□□□ 1.25
CACNB3-201ENST00000301050 CTTNBP2Q8WZ74 1663 aa22.86■■□□□ 1.25
CACNB3-201ENST00000301050 FHOD3Q2V2M9 1422 aa22.79■■□□□ 1.24
CACNB3-201ENST00000301050 BCANQ96GW7 911 aa22.78■■□□□ 1.24
CACNB3-201ENST00000301050 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
CACNB3-201ENST00000301050 AQRO60306 1485 aaKnown RBP eCLIP22.78■■□□□ 1.24
CACNB3-201ENST00000301050 PCF11O94913 1555 aaKnown RBP22.76■■□□□ 1.23
CACNB3-201ENST00000301050 WDR62O43379 1518 aa22.75■■□□□ 1.23
CACNB3-201ENST00000301050 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
CACNB3-201ENST00000301050 EFCAB5A4FU69 1503 aa22.75■■□□□ 1.23
CACNB3-201ENST00000301050 RBM19Q9Y4C8 960 aaKnown RBP22.74■■□□□ 1.23
CACNB3-201ENST00000301050 FHAD1B1AJZ9 1412 aa22.73■■□□□ 1.23
CACNB3-201ENST00000301050 ERCC6Q03468 1493 aa22.72■■□□□ 1.23
CACNB3-201ENST00000301050 ATP1B4Q9UN42 357 aaPredicted RBP22.71■■□□□ 1.23
CACNB3-201ENST00000301050 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
CACNB3-201ENST00000301050 IFT140Q96RY7 1462 aa22.68■■□□□ 1.22
CACNB3-201ENST00000301050 MAP3K1Q13233 1512 aa22.67■■□□□ 1.22
CACNB3-201ENST00000301050 FKBP8Q14318 412 aa22.67■■□□□ 1.22
CACNB3-201ENST00000301050 PRKCSHP14314 528 aaPredicted RBP22.67■■□□□ 1.22
CACNB3-201ENST00000301050 ADAMTS12P58397 1594 aa22.66■■□□□ 1.22
CACNB3-201ENST00000301050 RRBP1Q9P2E9 1410 aaKnown RBP22.66■■□□□ 1.22
CACNB3-201ENST00000301050 CFAP43Q8NDM7 1665 aa22.65■■□□□ 1.22
CACNB3-201ENST00000301050 GRIN2BQ13224 1484 aa22.64■■□□□ 1.22
CACNB3-201ENST00000301050 LRRC9Q6ZRR7 1453 aa22.64■■□□□ 1.22
CACNB3-201ENST00000301050 KCNH8Q96L42 1107 aa22.64■■□□□ 1.21
CACNB3-201ENST00000301050 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
CACNB3-201ENST00000301050 FYCO1Q9BQS8 1478 aa22.62■■□□□ 1.21
CACNB3-201ENST00000301050 THOC2Q8NI27 1593 aaKnown RBP22.61■■□□□ 1.21
CACNB3-201ENST00000301050 CASKIN1Q8WXD9 1431 aa22.61■■□□□ 1.21
CACNB3-201ENST00000301050 DHX57Q6P158 1386 aaKnown RBP22.6■■□□□ 1.21
CACNB3-201ENST00000301050 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
CACNB3-201ENST00000301050 FMN1Q68DA7 1419 aa22.58■■□□□ 1.2
CACNB3-201ENST00000301050 MSH5O43196 834 aa22.57■■□□□ 1.2
CACNB3-201ENST00000301050 EIF4G3O43432 1585 aaKnown RBP22.56■■□□□ 1.2
CACNB3-201ENST00000301050 SNAPC4Q5SXM2 1469 aa22.56■■□□□ 1.2
CACNB3-201ENST00000301050 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
CACNB3-201ENST00000301050 ITGAEP38570 1179 aa22.54■■□□□ 1.2
CACNB3-201ENST00000301050 IQGAP2Q13576 1575 aa22.52■■□□□ 1.2
CACNB3-201ENST00000301050 LRRIQ1Q96JM4 1722 aa22.49■■□□□ 1.19
CACNB3-201ENST00000301050 NEFLP07196 543 aa22.45■■□□□ 1.19
CACNB3-201ENST00000301050 FAM50AQ14320 339 aaKnown RBP22.42■■□□□ 1.18
CACNB3-201ENST00000301050 GRIN2AQ12879 1464 aa22.4■■□□□ 1.18
CACNB3-201ENST00000301050 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
CACNB3-201ENST00000301050 FANCIQ9NVI1 1328 aa22.37■■□□□ 1.17
CACNB3-201ENST00000301050 UGGT2Q9NYU1 1516 aa22.37■■□□□ 1.17
CACNB3-201ENST00000301050 KIAA0586Q9BVV6 1533 aa22.35■■□□□ 1.17
CACNB3-201ENST00000301050 MAGI1Q96QZ7 1491 aaPredicted RBP22.35■■□□□ 1.17
CACNB3-201ENST00000301050 FBLN2P98095 1184 aa22.33■■□□□ 1.16
CACNB3-201ENST00000301050 CHMP7Q8WUX9 453 aaPredicted RBP22.33■■□□□ 1.16
CACNB3-201ENST00000301050 ERICH6Q7L0X2 663 aa22.32■■□□□ 1.16
CACNB3-201ENST00000301050 HECW1Q76N89 1606 aa22.32■■□□□ 1.16
CACNB3-201ENST00000301050 SYNJ2O15056 1496 aa22.31■■□□□ 1.16
CACNB3-201ENST00000301050 RAB3GAP2Q9H2M9 1393 aa22.3■■□□□ 1.16
CACNB3-201ENST00000301050 KIAA0556O60303 1618 aa22.3■■□□□ 1.16
CACNB3-201ENST00000301050 MAGI3Q5TCQ9 1506 aa22.3■■□□□ 1.16
CACNB3-201ENST00000301050 DISP1Q96F81 1524 aa22.3■■□□□ 1.16
CACNB3-201ENST00000301050 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
CACNB3-201ENST00000301050 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
CACNB3-201ENST00000301050 NCOA2Q15596 1464 aa22.28■■□□□ 1.16
CACNB3-201ENST00000301050 EHBP1L1Q8N3D4 1523 aa22.28■■□□□ 1.16
CACNB3-201ENST00000301050 FGD6Q6ZV73 1430 aa22.28■■□□□ 1.16
CACNB3-201ENST00000301050 CCDC18Q5T9S5 1454 aa22.28■■□□□ 1.16
CACNB3-201ENST00000301050 SUPT6HQ7KZ85 1726 aaKnown RBP22.26■■□□□ 1.15
CACNB3-201ENST00000301050 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
CACNB3-201ENST00000301050 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
CACNB3-201ENST00000301050 DDX10Q13206 875 aaKnown RBP22.24■■□□□ 1.15
CACNB3-201ENST00000301050 SETD5Q9C0A6 1442 aa22.24■■□□□ 1.15
CACNB3-201ENST00000301050 MYT1LQ9UL68 1186 aa22.24■■□□□ 1.15
CACNB3-201ENST00000301050 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
CACNB3-201ENST00000301050 DEKP35659 375 aaKnown RBP22.21■■□□□ 1.15
CACNB3-201ENST00000301050 MYOM3Q5VTT5 1437 aa22.2■■□□□ 1.14
CACNB3-201ENST00000301050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.14
CACNB3-201ENST00000301050 CDK11AQ9UQ88 783 aaPredicted RBP22.17■■□□□ 1.14
CACNB3-201ENST00000301050 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
CACNB3-201ENST00000301050 NUP160Q12769 1436 aa22.16■■□□□ 1.14
CACNB3-201ENST00000301050 RAPGEF6Q8TEU7 1601 aa22.14■■□□□ 1.14
CACNB3-201ENST00000301050 PPP1R15AO75807 674 aaPredicted RBP22.14■■□□□ 1.13
CACNB3-201ENST00000301050 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
CACNB3-201ENST00000301050 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
CACNB3-201ENST00000301050 PTPN23Q9H3S7 1636 aa22.13■■□□□ 1.13
CACNB3-201ENST00000301050 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
CACNB3-201ENST00000301050 MAPKBP1O60336 1514 aa22.12■■□□□ 1.13
CACNB3-201ENST00000301050 JPH4Q96JJ6 628 aa22.1■■□□□ 1.13
CACNB3-201ENST00000301050 PLB1Q6P1J6 1458 aa22.07■■□□□ 1.12
CACNB3-201ENST00000301050 ANO8Q9HCE9 1232 aaPredicted RBP22.06■■□□□ 1.12
CACNB3-201ENST00000301050 CARMIL2Q6F5E8 1435 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms