RNA–Protein interactions for RNA: ENST00000299339.2

CLDN10-201, Transcript of claudin 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN10, Length 949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN10-201ENST00000299339 LAMC3Q9Y6N6 1575 aa13.06□□□□□ -0.32
CLDN10-201ENST00000299339 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
CLDN10-201ENST00000299339 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
CLDN10-201ENST00000299339 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
CLDN10-201ENST00000299339 RIMBP3CA6NJZ7 1639 aa12.94□□□□□ -0.34
CLDN10-201ENST00000299339 RIMBP3BA6NNM3 1639 aa12.94□□□□□ -0.34
CLDN10-201ENST00000299339 RIMBP3Q9UFD9 1639 aa12.94□□□□□ -0.34
CLDN10-201ENST00000299339 BAZ1BQ9UIG0 1483 aaKnown RBP12.93□□□□□ -0.34
CLDN10-201ENST00000299339 WDR62O43379 1518 aa12.92□□□□□ -0.34
CLDN10-201ENST00000299339 MRC2Q9UBG0 1479 aa12.91□□□□□ -0.34
CLDN10-201ENST00000299339 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
CLDN10-201ENST00000299339 GABBR2O75899 941 aa12.88□□□□□ -0.35
CLDN10-201ENST00000299339 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
CLDN10-201ENST00000299339 PEG3Q9GZU2 1588 aa12.83□□□□□ -0.36
CLDN10-201ENST00000299339 ARHGEF11O15085 1522 aa12.8□□□□□ -0.36
CLDN10-201ENST00000299339 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.37
CLDN10-201ENST00000299339 CEP164Q9UPV0 1460 aa12.73□□□□□ -0.37
CLDN10-201ENST00000299339 FARP1Q9Y4F1 1045 aaPredicted RBP12.71□□□□□ -0.37
CLDN10-201ENST00000299339 LHX8Q68G74 356 aa12.7□□□□□ -0.38
CLDN10-201ENST00000299339 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
CLDN10-201ENST00000299339 CD44P16070 742 aaKnown RBP12.68□□□□□ -0.38
CLDN10-201ENST00000299339 PLSCR2Q9NRY7 297 aa12.66□□□□□ -0.38
CLDN10-201ENST00000299339 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
CLDN10-201ENST00000299339 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
CLDN10-201ENST00000299339 ARAP1Q96P48 1450 aa12.63□□□□□ -0.39
CLDN10-201ENST00000299339 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
CLDN10-201ENST00000299339 URB2Q14146 1524 aaKnown RBP12.61□□□□□ -0.39
CLDN10-201ENST00000299339 CLCN6P51797 869 aa12.57□□□□□ -0.4
CLDN10-201ENST00000299339 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
CLDN10-201ENST00000299339 CHD1O14646 1710 aa12.54□□□□□ -0.4
CLDN10-201ENST00000299339 CREBZFQ9NS37 354 aa12.53□□□□□ -0.4
CLDN10-201ENST00000299339 CFTRP13569 1480 aa12.51□□□□□ -0.41
CLDN10-201ENST00000299339 ZNF579Q8NAF0 562 aaKnown RBP12.5□□□□□ -0.41
CLDN10-201ENST00000299339 RSF1Q96T23 1441 aaPredicted RBP12.49□□□□□ -0.41
CLDN10-201ENST00000299339 EIF4G3O43432 1585 aaKnown RBP12.48□□□□□ -0.41
CLDN10-201ENST00000299339 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
CLDN10-201ENST00000299339 WIZO95785 1651 aa12.48□□□□□ -0.41
CLDN10-201ENST00000299339 STAG3Q9UJ98 1225 aa12.47□□□□□ -0.41
CLDN10-201ENST00000299339 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
CLDN10-201ENST00000299339 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
CLDN10-201ENST00000299339 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
CLDN10-201ENST00000299339 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
CLDN10-201ENST00000299339 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
CLDN10-201ENST00000299339 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
CLDN10-201ENST00000299339 CLASP1Q7Z460 1538 aa12.35□□□□□ -0.43
CLDN10-201ENST00000299339 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
CLDN10-201ENST00000299339 AQRO60306 1485 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLDN10-201ENST00000299339 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
CLDN10-201ENST00000299339 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
CLDN10-201ENST00000299339 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
CLDN10-201ENST00000299339 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
CLDN10-201ENST00000299339 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
CLDN10-201ENST00000299339 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
CLDN10-201ENST00000299339 PAK3O75914 559 aaPredicted RBP12.25□□□□□ -0.45
CLDN10-201ENST00000299339 TOP2AP11388 1531 aaKnown RBP12.25□□□□□ -0.45
CLDN10-201ENST00000299339 GAPVD1Q14C86 1478 aa12.24□□□□□ -0.45
CLDN10-201ENST00000299339 NPM1P06748 294 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLDN10-201ENST00000299339 KIF13AQ9H1H9 1805 aa12.21□□□□□ -0.45
CLDN10-201ENST00000299339 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
CLDN10-201ENST00000299339 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
CLDN10-201ENST00000299339 SNAPC4Q5SXM2 1469 aa12.21□□□□□ -0.46
CLDN10-201ENST00000299339 POLA1P09884 1462 aaPredicted RBP12.18□□□□□ -0.46
CLDN10-201ENST00000299339 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
CLDN10-201ENST00000299339 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
CLDN10-201ENST00000299339 CHMP7Q8WUX9 453 aaPredicted RBP12.15□□□□□ -0.46
CLDN10-201ENST00000299339 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
CLDN10-201ENST00000299339 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
CLDN10-201ENST00000299339 MAGI1Q96QZ7 1491 aaPredicted RBP12.14□□□□□ -0.47
CLDN10-201ENST00000299339 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
CLDN10-201ENST00000299339 PROM2Q8N271 834 aa12.13□□□□□ -0.47
CLDN10-201ENST00000299339 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
CLDN10-201ENST00000299339 ERCC6L2Q5T890 1561 aa12.1□□□□□ -0.47
CLDN10-201ENST00000299339 CCDC88BA6NC98 1476 aa12.1□□□□□ -0.47
CLDN10-201ENST00000299339 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
CLDN10-201ENST00000299339 MS4A3Q96HJ5 214 aa12.1□□□□□ -0.47
CLDN10-201ENST00000299339 SOGA1O94964 1423 aa12.09□□□□□ -0.47
CLDN10-201ENST00000299339 GRIN2BQ13224 1484 aa12.07□□□□□ -0.48
CLDN10-201ENST00000299339 ATMINO43313 823 aaPredicted RBP12.06□□□□□ -0.48
CLDN10-201ENST00000299339 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
CLDN10-201ENST00000299339 KDM6BO15054 1643 aa12.04□□□□□ -0.48
CLDN10-201ENST00000299339 METRNQ9UJH8 293 aa12.03□□□□□ -0.48
CLDN10-201ENST00000299339 SLC39A7Q92504 469 aa12.02□□□□□ -0.49
CLDN10-201ENST00000299339 POTEJP0CG39 1038 aa12.01□□□□□ -0.49
CLDN10-201ENST00000299339 C7P10643 843 aa12.01□□□□□ -0.49
CLDN10-201ENST00000299339 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
CLDN10-201ENST00000299339 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
CLDN10-201ENST00000299339 CEP170Q5SW79 1584 aa12.01□□□□□ -0.49
CLDN10-201ENST00000299339 TSPYL2Q9H2G4 693 aaPredicted RBP12□□□□□ -0.49
CLDN10-201ENST00000299339 HECW2Q9P2P5 1572 aa12□□□□□ -0.49
CLDN10-201ENST00000299339 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
CLDN10-201ENST00000299339 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
CLDN10-201ENST00000299339 FAM69CQ0P6D2 419 aa11.97□□□□□ -0.49
CLDN10-201ENST00000299339 SHROOM2Q13796 1616 aa11.97□□□□□ -0.49
CLDN10-201ENST00000299339 POTEMA6NI47 508 aa11.96□□□□□ -0.49
CLDN10-201ENST00000299339 KIF12Q96FN5 646 aa11.95□□□□□ -0.5
CLDN10-201ENST00000299339 TSPOAP1O95153 1857 aa11.95□□□□□ -0.5
CLDN10-201ENST00000299339 FKBP8Q14318 412 aa11.94□□□□□ -0.5
CLDN10-201ENST00000299339 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
CLDN10-201ENST00000299339 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
CLDN10-201ENST00000299339 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms