RNA–Protein interactions for RNA: ENST00000291535.11

UBASH3A-201, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3A, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-201ENST00000291535 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
UBASH3A-201ENST00000291535 LRRC9Q6ZRR7 1453 aa17.49■□□□□ 0.39
UBASH3A-201ENST00000291535 KCNH8Q96L42 1107 aa17.45■□□□□ 0.38
UBASH3A-201ENST00000291535 DNAJC5Q9H3Z4 198 aa17.44■□□□□ 0.38
UBASH3A-201ENST00000291535 PHLDB1Q86UU1 1377 aa17.44■□□□□ 0.38
UBASH3A-201ENST00000291535 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
UBASH3A-201ENST00000291535 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
UBASH3A-201ENST00000291535 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
UBASH3A-201ENST00000291535 ITGAEP38570 1179 aa17.43■□□□□ 0.38
UBASH3A-201ENST00000291535 CFAP43Q8NDM7 1665 aa17.41■□□□□ 0.38
UBASH3A-201ENST00000291535 CARMIL1Q5VZK9 1371 aa17.4■□□□□ 0.38
UBASH3A-201ENST00000291535 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
UBASH3A-201ENST00000291535 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.37
UBASH3A-201ENST00000291535 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
UBASH3A-201ENST00000291535 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
UBASH3A-201ENST00000291535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.37■□□□□ 0.37
UBASH3A-201ENST00000291535 KIF21AQ7Z4S6 1674 aa17.35■□□□□ 0.37
UBASH3A-201ENST00000291535 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
UBASH3A-201ENST00000291535 SIN3AQ96ST3 1273 aa17.34■□□□□ 0.37
UBASH3A-201ENST00000291535 PCF11O94913 1555 aaKnown RBP17.33■□□□□ 0.37
UBASH3A-201ENST00000291535 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
UBASH3A-201ENST00000291535 DDX10Q13206 875 aaKnown RBP17.32■□□□□ 0.36
UBASH3A-201ENST00000291535 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
UBASH3A-201ENST00000291535 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
UBASH3A-201ENST00000291535 ANP32EQ9BTT0 268 aa17.3■□□□□ 0.36
UBASH3A-201ENST00000291535 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
UBASH3A-201ENST00000291535 FAM50AQ14320 339 aaKnown RBP17.27■□□□□ 0.36
UBASH3A-201ENST00000291535 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.35
UBASH3A-201ENST00000291535 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.35
UBASH3A-201ENST00000291535 FKBP8Q14318 412 aa17.25■□□□□ 0.35
UBASH3A-201ENST00000291535 MRC2Q9UBG0 1479 aa17.21■□□□□ 0.35
UBASH3A-201ENST00000291535 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
UBASH3A-201ENST00000291535 FANCD2Q9BXW9 1451 aa17.2■□□□□ 0.34
UBASH3A-201ENST00000291535 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
UBASH3A-201ENST00000291535 FGD6Q6ZV73 1430 aa17.19■□□□□ 0.34
UBASH3A-201ENST00000291535 BCANQ96GW7 911 aa17.18■□□□□ 0.34
UBASH3A-201ENST00000291535 DNMBPQ6XZF7 1577 aa17.17■□□□□ 0.34
UBASH3A-201ENST00000291535 HFM1A2PYH4 1435 aa17.17■□□□□ 0.34
UBASH3A-201ENST00000291535 ANP32CO43423 234 aa17.17■□□□□ 0.34
UBASH3A-201ENST00000291535 UACAQ9BZF9 1416 aa17.16■□□□□ 0.34
UBASH3A-201ENST00000291535 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
UBASH3A-201ENST00000291535 P3H3Q8IVL6 736 aa17.14■□□□□ 0.34
UBASH3A-201ENST00000291535 CCDC18Q5T9S5 1454 aa17.14■□□□□ 0.34
UBASH3A-201ENST00000291535 KDM5BQ9UGL1 1544 aa17.14■□□□□ 0.33
UBASH3A-201ENST00000291535 CUL7Q14999 1698 aa17.14■□□□□ 0.33
UBASH3A-201ENST00000291535 PTPRKQ15262 1439 aa17.14■□□□□ 0.33
UBASH3A-201ENST00000291535 WDR62O43379 1518 aa17.13■□□□□ 0.33
UBASH3A-201ENST00000291535 FMN1Q68DA7 1419 aa17.13■□□□□ 0.33
UBASH3A-201ENST00000291535 NEFLP07196 543 aa17.13■□□□□ 0.33
UBASH3A-201ENST00000291535 HIRIP3Q9BW71 556 aaPredicted RBP17.13■□□□□ 0.33
UBASH3A-201ENST00000291535 PTPN23Q9H3S7 1636 aa17.12■□□□□ 0.33
UBASH3A-201ENST00000291535 CTTNBP2Q8WZ74 1663 aa17.12■□□□□ 0.33
UBASH3A-201ENST00000291535 TONSLQ96HA7 1378 aa17.11■□□□□ 0.33
UBASH3A-201ENST00000291535 TRIM52Q96A61 297 aa17.11■□□□□ 0.33
UBASH3A-201ENST00000291535 RBM19Q9Y4C8 960 aaKnown RBP17.11■□□□□ 0.33
UBASH3A-201ENST00000291535 RAD54L2Q9Y4B4 1467 aa17.1■□□□□ 0.33
UBASH3A-201ENST00000291535 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
UBASH3A-201ENST00000291535 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
UBASH3A-201ENST00000291535 NAIPQ13075 1403 aa17.09■□□□□ 0.33
UBASH3A-201ENST00000291535 ATP1B4Q9UN42 357 aaPredicted RBP17.07■□□□□ 0.32
UBASH3A-201ENST00000291535 SAMD9Q5K651 1589 aa17.06■□□□□ 0.32
UBASH3A-201ENST00000291535 URB2Q14146 1524 aaKnown RBP17.05■□□□□ 0.32
UBASH3A-201ENST00000291535 MYOM3Q5VTT5 1437 aa17.04■□□□□ 0.32
UBASH3A-201ENST00000291535 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
UBASH3A-201ENST00000291535 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
UBASH3A-201ENST00000291535 MTUS2Q5JR59 1369 aa17.03■□□□□ 0.32
UBASH3A-201ENST00000291535 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
UBASH3A-201ENST00000291535 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
UBASH3A-201ENST00000291535 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
UBASH3A-201ENST00000291535 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
UBASH3A-201ENST00000291535 UGGT2Q9NYU1 1516 aa16.98■□□□□ 0.31
UBASH3A-201ENST00000291535 DENND4BO75064 1496 aaPredicted RBP16.98■□□□□ 0.31
UBASH3A-201ENST00000291535 TCOF1Q13428 1488 aaKnown RBP16.96■□□□□ 0.31
UBASH3A-201ENST00000291535 AKNAQ7Z591 1439 aa16.96■□□□□ 0.31
UBASH3A-201ENST00000291535 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
UBASH3A-201ENST00000291535 ABCA5Q8WWZ7 1642 aa16.94■□□□□ 0.3
UBASH3A-201ENST00000291535 HECW1Q76N89 1606 aa16.94■□□□□ 0.3
UBASH3A-201ENST00000291535 GCC2Q8IWJ2 1684 aa16.94■□□□□ 0.3
UBASH3A-201ENST00000291535 ERICH6BQ5W0A0 696 aa16.94■□□□□ 0.3
UBASH3A-201ENST00000291535 FANCIQ9NVI1 1328 aa16.92■□□□□ 0.3
UBASH3A-201ENST00000291535 MAGI3Q5TCQ9 1506 aa16.91■□□□□ 0.3
UBASH3A-201ENST00000291535 MSH5O43196 834 aa16.91■□□□□ 0.3
UBASH3A-201ENST00000291535 HNRNPUQ00839 825 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBASH3A-201ENST00000291535 HSPA5P11021 654 aaKnown RBP16.91■□□□□ 0.3
UBASH3A-201ENST00000291535 CNTLNQ9NXG0 1405 aa16.88■□□□□ 0.29
UBASH3A-201ENST00000291535 BCL11AQ9H165 835 aa16.87■□□□□ 0.29
UBASH3A-201ENST00000291535 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
UBASH3A-201ENST00000291535 NCOA1Q15788 1441 aa16.86■□□□□ 0.29
UBASH3A-201ENST00000291535 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
UBASH3A-201ENST00000291535 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
UBASH3A-201ENST00000291535 KDM6BO15054 1643 aa16.85■□□□□ 0.29
UBASH3A-201ENST00000291535 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
UBASH3A-201ENST00000291535 MIA2Q96PC5 1412 aa16.83■□□□□ 0.29
UBASH3A-201ENST00000291535 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.29
UBASH3A-201ENST00000291535 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
UBASH3A-201ENST00000291535 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
UBASH3A-201ENST00000291535 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
UBASH3A-201ENST00000291535 CCDC7Q96M83 1385 aa16.81■□□□□ 0.28
UBASH3A-201ENST00000291535 CCDC184Q52MB2 194 aa16.8■□□□□ 0.28
UBASH3A-201ENST00000291535 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms