RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 SETD5Q9C0A6 1442 aa14.26□□□□□ -0.13
HMGCR-201ENST00000287936 TONSLQ96HA7 1378 aa14.22□□□□□ -0.13
HMGCR-201ENST00000287936 RAB3GAP2Q9H2M9 1393 aa14.22□□□□□ -0.13
HMGCR-201ENST00000287936 FMN1Q68DA7 1419 aa14.22□□□□□ -0.13
HMGCR-201ENST00000287936 TRIM52Q96A61 297 aa14.21□□□□□ -0.14
HMGCR-201ENST00000287936 ANP32CO43423 234 aa14.2□□□□□ -0.14
HMGCR-201ENST00000287936 TIMELESSQ9UNS1 1208 aa14.2□□□□□ -0.14
HMGCR-201ENST00000287936 PDS5BQ9NTI5 1447 aa14.2□□□□□ -0.14
HMGCR-201ENST00000287936 CC2D2AQ9P2K1 1620 aa14.17□□□□□ -0.14
HMGCR-201ENST00000287936 FHOD3Q2V2M9 1422 aa14.17□□□□□ -0.14
HMGCR-201ENST00000287936 LRRC9Q6ZRR7 1453 aa14.16□□□□□ -0.14
HMGCR-201ENST00000287936 MAP3K1Q13233 1512 aa14.15□□□□□ -0.14
HMGCR-201ENST00000287936 TIAM1Q13009 1591 aa14.14□□□□□ -0.15
HMGCR-201ENST00000287936 DNMBPQ6XZF7 1577 aa14.14□□□□□ -0.15
HMGCR-201ENST00000287936 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
HMGCR-201ENST00000287936 RAD54L2Q9Y4B4 1467 aa14.13□□□□□ -0.15
HMGCR-201ENST00000287936 DDX10Q13206 875 aaKnown RBP14.13□□□□□ -0.15
HMGCR-201ENST00000287936 EFCAB5A4FU69 1503 aa14.12□□□□□ -0.15
HMGCR-201ENST00000287936 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
HMGCR-201ENST00000287936 TOPBP1Q92547 1522 aa14.11□□□□□ -0.15
HMGCR-201ENST00000287936 FYCO1Q9BQS8 1478 aa14.1□□□□□ -0.15
HMGCR-201ENST00000287936 SIN3AQ96ST3 1273 aa14.1□□□□□ -0.15
HMGCR-201ENST00000287936 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
HMGCR-201ENST00000287936 CASKIN1Q8WXD9 1431 aa14.09□□□□□ -0.15
HMGCR-201ENST00000287936 ABCA10Q8WWZ4 1543 aa14.09□□□□□ -0.15
HMGCR-201ENST00000287936 PHLDB1Q86UU1 1377 aa14.08□□□□□ -0.16
HMGCR-201ENST00000287936 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
HMGCR-201ENST00000287936 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
HMGCR-201ENST00000287936 ARID3CA6NKF2 412 aa14.05□□□□□ -0.16
HMGCR-201ENST00000287936 CUL7Q14999 1698 aa14.04□□□□□ -0.16
HMGCR-201ENST00000287936 CHIC2Q9UKJ5 165 aa14.04□□□□□ -0.16
HMGCR-201ENST00000287936 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.171e-7■■■■■ 40.5
HMGCR-201ENST00000287936 NESP48681 1621 aa14.02□□□□□ -0.17
HMGCR-201ENST00000287936 RRP7BPQ9NSQ0 103 aa14.01□□□□□ -0.17
HMGCR-201ENST00000287936 FGD6Q6ZV73 1430 aa14□□□□□ -0.17
HMGCR-201ENST00000287936 LAMC3Q9Y6N6 1575 aa14□□□□□ -0.17
HMGCR-201ENST00000287936 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14□□□□□ -0.179e-7■■□□□ 13.3
HMGCR-201ENST00000287936 PCF11O94913 1555 aaKnown RBP14□□□□□ -0.17
HMGCR-201ENST00000287936 PPP1R15AO75807 674 aaPredicted RBP13.99□□□□□ -0.17
HMGCR-201ENST00000287936 FBLN2P98095 1184 aa13.99□□□□□ -0.17
HMGCR-201ENST00000287936 CCDC18Q5T9S5 1454 aa13.96□□□□□ -0.17
HMGCR-201ENST00000287936 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
HMGCR-201ENST00000287936 MYOM3Q5VTT5 1437 aa13.95□□□□□ -0.18
HMGCR-201ENST00000287936 CCER2I3L3R5 266 aa13.95□□□□□ -0.18
HMGCR-201ENST00000287936 EIF4G2P78344 907 aaKnown RBP eCLIP13.94□□□□□ -0.18
HMGCR-201ENST00000287936 CHMP7Q8WUX9 453 aaPredicted RBP13.93□□□□□ -0.18
HMGCR-201ENST00000287936 BCANQ96GW7 911 aa13.93□□□□□ -0.18
HMGCR-201ENST00000287936 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
HMGCR-201ENST00000287936 ZNF777Q9ULD5 760 aaPredicted RBP13.92□□□□□ -0.18
HMGCR-201ENST00000287936 NCOA2Q15596 1464 aa13.92□□□□□ -0.18
HMGCR-201ENST00000287936 FKBP8Q14318 412 aa13.91□□□□□ -0.18
HMGCR-201ENST00000287936 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
HMGCR-201ENST00000287936 EHBP1L1Q8N3D4 1523 aa13.91□□□□□ -0.18
HMGCR-201ENST00000287936 CFAP43Q8NDM7 1665 aa13.91□□□□□ -0.18
HMGCR-201ENST00000287936 SUPT16HQ9Y5B9 1047 aaKnown RBP13.91□□□□□ -0.18
HMGCR-201ENST00000287936 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
HMGCR-201ENST00000287936 SLC4A1APQ9BWU0 796 aaKnown RBP13.88□□□□□ -0.19
HMGCR-201ENST00000287936 CTTNBP2Q8WZ74 1663 aa13.87□□□□□ -0.19
HMGCR-201ENST00000287936 HFM1A2PYH4 1435 aa13.87□□□□□ -0.19
HMGCR-201ENST00000287936 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
HMGCR-201ENST00000287936 HNRNPUQ00839 825 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGCR-201ENST00000287936 ZNF326Q5BKZ1 582 aaKnown RBP13.86□□□□□ -0.19
HMGCR-201ENST00000287936 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
HMGCR-201ENST00000287936 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
HMGCR-201ENST00000287936 SUPT6HQ7KZ85 1726 aaKnown RBP13.85□□□□□ -0.19
HMGCR-201ENST00000287936 GRIN2BQ13224 1484 aa13.84□□□□□ -0.19
HMGCR-201ENST00000287936 MAPKBP1O60336 1514 aa13.84□□□□□ -0.19
HMGCR-201ENST00000287936 HECW1Q76N89 1606 aa13.83□□□□□ -0.2
HMGCR-201ENST00000287936 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
HMGCR-201ENST00000287936 MPHOSPH9Q99550 1183 aa13.83□□□□□ -0.2
HMGCR-201ENST00000287936 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
HMGCR-201ENST00000287936 PLEKHD1A6NEE1 506 aa13.82□□□□□ -0.2
HMGCR-201ENST00000287936 TSPY4P0CV99 314 aa13.81□□□□□ -0.2
HMGCR-201ENST00000287936 TSPY10P0CW01 314 aa13.81□□□□□ -0.2
HMGCR-201ENST00000287936 CARMIL2Q6F5E8 1435 aa13.81□□□□□ -0.2
HMGCR-201ENST00000287936 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
HMGCR-201ENST00000287936 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
HMGCR-201ENST00000287936 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
HMGCR-201ENST00000287936 IFT140Q96RY7 1462 aa13.78□□□□□ -0.2
HMGCR-201ENST00000287936 IQGAP2Q13576 1575 aa13.78□□□□□ -0.2
HMGCR-201ENST00000287936 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.2
HMGCR-201ENST00000287936 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
HMGCR-201ENST00000287936 NAIPQ13075 1403 aa13.77□□□□□ -0.21
HMGCR-201ENST00000287936 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
HMGCR-201ENST00000287936 PTPN23Q9H3S7 1636 aa13.75□□□□□ -0.21
HMGCR-201ENST00000287936 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
HMGCR-201ENST00000287936 FAM9BQ8IZU0 186 aa13.74□□□□□ -0.21
HMGCR-201ENST00000287936 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
HMGCR-201ENST00000287936 ABCA5Q8WWZ7 1642 aa13.74□□□□□ -0.21
HMGCR-201ENST00000287936 L3MBTL2Q969R5 705 aa13.73□□□□□ -0.21
HMGCR-201ENST00000287936 ANKRD30AQ9BXX3 1397 aa13.72□□□□□ -0.21
HMGCR-201ENST00000287936 SAMD9Q5K651 1589 aa13.71□□□□□ -0.21
HMGCR-201ENST00000287936 KIF21AQ7Z4S6 1674 aa13.7□□□□□ -0.22
HMGCR-201ENST00000287936 KIAA0586Q9BVV6 1533 aa13.7□□□□□ -0.22
HMGCR-201ENST00000287936 UGGT2Q9NYU1 1516 aa13.7□□□□□ -0.22
HMGCR-201ENST00000287936 FOXD1Q16676 465 aa13.7□□□□□ -0.22
HMGCR-201ENST00000287936 AKNAQ7Z591 1439 aa13.69□□□□□ -0.22
HMGCR-201ENST00000287936 CDK13Q14004 1512 aaKnown RBP13.67□□□□□ -0.22
HMGCR-201ENST00000287936 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
HMGCR-201ENST00000287936 JPH4Q96JJ6 628 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms