RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
CSF1R-201ENST00000286301 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
CSF1R-201ENST00000286301 ARAP1Q96P48 1450 aa13.52□□□□□ -0.25
CSF1R-201ENST00000286301 ZNF777Q9ULD5 760 aaPredicted RBP13.51□□□□□ -0.25
CSF1R-201ENST00000286301 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
CSF1R-201ENST00000286301 CCNB3Q8WWL7 1395 aa13.49□□□□□ -0.25
CSF1R-201ENST00000286301 TOPBP1Q92547 1522 aa13.48□□□□□ -0.25
CSF1R-201ENST00000286301 AQRO60306 1485 aaKnown RBP eCLIP13.45□□□□□ -0.26
CSF1R-201ENST00000286301 ARHGAP35Q9NRY4 1499 aa13.45□□□□□ -0.26
CSF1R-201ENST00000286301 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
CSF1R-201ENST00000286301 BIVM-ERCC5R4GMW8 1640 aa13.45□□□□□ -0.26
CSF1R-201ENST00000286301 RRP7BPQ9NSQ0 103 aa13.44□□□□□ -0.26
CSF1R-201ENST00000286301 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
CSF1R-201ENST00000286301 GAPVD1Q14C86 1478 aa13.43□□□□□ -0.26
CSF1R-201ENST00000286301 BCL11AQ9H165 835 aa13.41□□□□□ -0.26
CSF1R-201ENST00000286301 HIRIP3Q9BW71 556 aaPredicted RBP13.41□□□□□ -0.26
CSF1R-201ENST00000286301 SIN3AQ96ST3 1273 aa13.4□□□□□ -0.26
CSF1R-201ENST00000286301 CNGB1Q14028 1251 aaPredicted RBP13.4□□□□□ -0.26
CSF1R-201ENST00000286301 CDK11AQ9UQ88 783 aaPredicted RBP13.39□□□□□ -0.27
CSF1R-201ENST00000286301 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
CSF1R-201ENST00000286301 URB2Q14146 1524 aaKnown RBP13.37□□□□□ -0.27
CSF1R-201ENST00000286301 MYT1LQ9UL68 1186 aa13.37□□□□□ -0.27
CSF1R-201ENST00000286301 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
CSF1R-201ENST00000286301 MIER1Q8N108 512 aa13.34□□□□□ -0.27
CSF1R-201ENST00000286301 FMN1Q68DA7 1419 aa13.33□□□□□ -0.28
CSF1R-201ENST00000286301 ZNF326Q5BKZ1 582 aaKnown RBP13.33□□□□□ -0.28
CSF1R-201ENST00000286301 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
CSF1R-201ENST00000286301 ABCA10Q8WWZ4 1543 aa13.32□□□□□ -0.28
CSF1R-201ENST00000286301 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
CSF1R-201ENST00000286301 PHLDB1Q86UU1 1377 aa13.31□□□□□ -0.28
CSF1R-201ENST00000286301 DDX10Q13206 875 aaKnown RBP13.27□□□□□ -0.28
CSF1R-201ENST00000286301 DHX57Q6P158 1386 aaKnown RBP13.27□□□□□ -0.28
CSF1R-201ENST00000286301 TONSLQ96HA7 1378 aa13.27□□□□□ -0.28
CSF1R-201ENST00000286301 KCNH8Q96L42 1107 aa13.27□□□□□ -0.29
CSF1R-201ENST00000286301 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
CSF1R-201ENST00000286301 CFDP1Q9UEE9 299 aaPredicted RBP13.25□□□□□ -0.29
CSF1R-201ENST00000286301 LRRC9Q6ZRR7 1453 aa13.25□□□□□ -0.29
CSF1R-201ENST00000286301 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
CSF1R-201ENST00000286301 JPH4Q96JJ6 628 aa13.25□□□□□ -0.29
CSF1R-201ENST00000286301 PLEKHD1A6NEE1 506 aa13.24□□□□□ -0.29
CSF1R-201ENST00000286301 FOXD1Q16676 465 aa13.22□□□□□ -0.29
CSF1R-201ENST00000286301 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
CSF1R-201ENST00000286301 GRIN2BQ13224 1484 aa13.2□□□□□ -0.3
CSF1R-201ENST00000286301 SLC4A1APQ9BWU0 796 aaKnown RBP13.19□□□□□ -0.3
CSF1R-201ENST00000286301 CLSPNQ9HAW4 1339 aa13.19□□□□□ -0.3
CSF1R-201ENST00000286301 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
CSF1R-201ENST00000286301 RRBP1Q9P2E9 1410 aaKnown RBP13.18□□□□□ -0.3
CSF1R-201ENST00000286301 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSF1R-201ENST00000286301 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
CSF1R-201ENST00000286301 KIF21AQ7Z4S6 1674 aa13.16□□□□□ -0.3
CSF1R-201ENST00000286301 ZNF644Q9H582 1327 aaPredicted RBP13.16□□□□□ -0.3
CSF1R-201ENST00000286301 TSPY4P0CV99 314 aa13.16□□□□□ -0.3
CSF1R-201ENST00000286301 TSPY10P0CW01 314 aa13.16□□□□□ -0.3
CSF1R-201ENST00000286301 BCANQ96GW7 911 aa13.16□□□□□ -0.3
CSF1R-201ENST00000286301 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
CSF1R-201ENST00000286301 SNAPC4Q5SXM2 1469 aa13.15□□□□□ -0.3
CSF1R-201ENST00000286301 PRDM2Q13029 1718 aa13.14□□□□□ -0.31
CSF1R-201ENST00000286301 ANP32EQ9BTT0 268 aa13.13□□□□□ -0.31
CSF1R-201ENST00000286301 IFT140Q96RY7 1462 aa13.13□□□□□ -0.31
CSF1R-201ENST00000286301 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
CSF1R-201ENST00000286301 FGD6Q6ZV73 1430 aa13.13□□□□□ -0.31
CSF1R-201ENST00000286301 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
CSF1R-201ENST00000286301 ANP32CO43423 234 aa13.12□□□□□ -0.31
CSF1R-201ENST00000286301 CUL7Q14999 1698 aa13.11□□□□□ -0.31
CSF1R-201ENST00000286301 KDM2AQ9Y2K7 1162 aa13.11□□□□□ -0.31
CSF1R-201ENST00000286301 NCOA2Q15596 1464 aa13.1□□□□□ -0.31
CSF1R-201ENST00000286301 EFCAB5A4FU69 1503 aa13.1□□□□□ -0.31
CSF1R-201ENST00000286301 ERICH6Q7L0X2 663 aa13.1□□□□□ -0.31
CSF1R-201ENST00000286301 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
CSF1R-201ENST00000286301 MYOM3Q5VTT5 1437 aa13.07□□□□□ -0.32
CSF1R-201ENST00000286301 HNRNPMP52272 730 aaKnown RBP eCLIP13.06□□□□□ -0.32
CSF1R-201ENST00000286301 MPHOSPH9Q99550 1183 aa13.06□□□□□ -0.32
CSF1R-201ENST00000286301 CCDC18Q5T9S5 1454 aa13.05□□□□□ -0.32
CSF1R-201ENST00000286301 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
CSF1R-201ENST00000286301 IQGAP2Q13576 1575 aa13.03□□□□□ -0.32
CSF1R-201ENST00000286301 RGL3Q3MIN7 710 aa13.03□□□□□ -0.32
CSF1R-201ENST00000286301 NEFLP07196 543 aa13.02□□□□□ -0.33
CSF1R-201ENST00000286301 PTPRGP23470 1445 aa13.02□□□□□ -0.33
CSF1R-201ENST00000286301 PRKCSHP14314 528 aaPredicted RBP13.01□□□□□ -0.33
CSF1R-201ENST00000286301 PRG4Q92954 1404 aaPredicted RBP13.01□□□□□ -0.33
CSF1R-201ENST00000286301 KIAA0586Q9BVV6 1533 aa13□□□□□ -0.33
CSF1R-201ENST00000286301 GRIN2AQ12879 1464 aa13□□□□□ -0.33
CSF1R-201ENST00000286301 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
CSF1R-201ENST00000286301 EIF4G2P78344 907 aaKnown RBP eCLIP12.99□□□□□ -0.33
CSF1R-201ENST00000286301 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
CSF1R-201ENST00000286301 PKD2Q13563 968 aa12.99□□□□□ -0.33
CSF1R-201ENST00000286301 PLB1Q6P1J6 1458 aa12.98□□□□□ -0.33
CSF1R-201ENST00000286301 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
CSF1R-201ENST00000286301 ABCA5Q8WWZ7 1642 aa12.97□□□□□ -0.33
CSF1R-201ENST00000286301 CTTNBP2Q8WZ74 1663 aa12.97□□□□□ -0.33
CSF1R-201ENST00000286301 MAP3K1Q13233 1512 aa12.96□□□□□ -0.33
CSF1R-201ENST00000286301 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
CSF1R-201ENST00000286301 TSHZ2Q9NRE2 1034 aa12.95□□□□□ -0.34
CSF1R-201ENST00000286301 TARBP1Q13395 1621 aaKnown RBP12.95□□□□□ -0.34
CSF1R-201ENST00000286301 PTPRKQ15262 1439 aa12.94□□□□□ -0.34
CSF1R-201ENST00000286301 SENP3Q9H4L4 574 aaPredicted RBP12.94□□□□□ -0.34
CSF1R-201ENST00000286301 TIMELESSQ9UNS1 1208 aa12.94□□□□□ -0.34
CSF1R-201ENST00000286301 SUPT16HQ9Y5B9 1047 aaKnown RBP12.94□□□□□ -0.34
CSF1R-201ENST00000286301 SYNJ2O15056 1496 aa12.94□□□□□ -0.34
CSF1R-201ENST00000286301 HSPA5P11021 654 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms