RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MAPKBP1O60336 1514 aa15.08■□□□□ 0
SKA1-201ENST00000285116 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0
SKA1-201ENST00000285116 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
SKA1-201ENST00000285116 EFCAB5A4FU69 1503 aa15.07■□□□□ 0
SKA1-201ENST00000285116 AQRO60306 1485 aaKnown RBP eCLIP15.06■□□□□ 01e-7■■■□□ 15.7
SKA1-201ENST00000285116 CUL7Q14999 1698 aa15.05■□□□□ 0
SKA1-201ENST00000285116 CARMIL1Q5VZK9 1371 aa15.05■□□□□ -0
SKA1-201ENST00000285116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.04■□□□□ -0
SKA1-201ENST00000285116 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
SKA1-201ENST00000285116 CTTNBP2Q8WZ74 1663 aa15.03■□□□□ -0
SKA1-201ENST00000285116 PCF11O94913 1555 aaKnown RBP15.03■□□□□ -0
SKA1-201ENST00000285116 FYCO1Q9BQS8 1478 aa15.02□□□□□ -0.01
SKA1-201ENST00000285116 ABCA10Q8WWZ4 1543 aa15.02□□□□□ -0.01
SKA1-201ENST00000285116 SUPT16HQ9Y5B9 1047 aaKnown RBP15.02□□□□□ -0.01
SKA1-201ENST00000285116 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
SKA1-201ENST00000285116 RAB3GAP2Q9H2M9 1393 aa15□□□□□ -0.01
SKA1-201ENST00000285116 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
SKA1-201ENST00000285116 TIMELESSQ9UNS1 1208 aa14.97□□□□□ -0.01
SKA1-201ENST00000285116 ANP32EQ9BTT0 268 aa14.96□□□□□ -0.01
SKA1-201ENST00000285116 CASKIN1Q8WXD9 1431 aa14.96□□□□□ -0.02
SKA1-201ENST00000285116 FANCD2Q9BXW9 1451 aa14.95□□□□□ -0.02
SKA1-201ENST00000285116 PHLDB1Q86UU1 1377 aa14.94□□□□□ -0.02
SKA1-201ENST00000285116 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
SKA1-201ENST00000285116 THOC2Q8NI27 1593 aaKnown RBP14.92□□□□□ -0.02
SKA1-201ENST00000285116 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
SKA1-201ENST00000285116 KIF21AQ7Z4S6 1674 aa14.91□□□□□ -0.02
SKA1-201ENST00000285116 P3H3Q8IVL6 736 aa14.91□□□□□ -0.02
SKA1-201ENST00000285116 SAMD9Q5K651 1589 aa14.91□□□□□ -0.02
SKA1-201ENST00000285116 FBLN2P98095 1184 aa14.9□□□□□ -0.02
SKA1-201ENST00000285116 POLA1P09884 1462 aaPredicted RBP14.89□□□□□ -0.03
SKA1-201ENST00000285116 SNAPC4Q5SXM2 1469 aa14.88□□□□□ -0.03
SKA1-201ENST00000285116 ABCA5Q8WWZ7 1642 aa14.87□□□□□ -0.03
SKA1-201ENST00000285116 FMN1Q68DA7 1419 aa14.87□□□□□ -0.03
SKA1-201ENST00000285116 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
SKA1-201ENST00000285116 ARID3CA6NKF2 412 aa14.85□□□□□ -0.03
SKA1-201ENST00000285116 TDRD9Q8NDG6 1382 aaKnown RBP14.85□□□□□ -0.03
SKA1-201ENST00000285116 ATP1B4Q9UN42 357 aaPredicted RBP14.84□□□□□ -0.03
SKA1-201ENST00000285116 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
SKA1-201ENST00000285116 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.04
SKA1-201ENST00000285116 BCL11AQ9H165 835 aa14.82□□□□□ -0.04
SKA1-201ENST00000285116 FHOD3Q2V2M9 1422 aa14.82□□□□□ -0.04
SKA1-201ENST00000285116 FGD6Q6ZV73 1430 aa14.81□□□□□ -0.04
SKA1-201ENST00000285116 HFM1A2PYH4 1435 aa14.79□□□□□ -0.04
SKA1-201ENST00000285116 GRIN2BQ13224 1484 aa14.79□□□□□ -0.04
SKA1-201ENST00000285116 PTPN23Q9H3S7 1636 aa14.79□□□□□ -0.04
SKA1-201ENST00000285116 ARHGEF11O15085 1522 aa14.79□□□□□ -0.04
SKA1-201ENST00000285116 SUPT6HQ7KZ85 1726 aaKnown RBP14.78□□□□□ -0.04
SKA1-201ENST00000285116 EHBP1L1Q8N3D4 1523 aa14.78□□□□□ -0.04
SKA1-201ENST00000285116 ERCC6Q03468 1493 aa14.77□□□□□ -0.04
SKA1-201ENST00000285116 UACAQ9BZF9 1416 aa14.76□□□□□ -0.05
SKA1-201ENST00000285116 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
SKA1-201ENST00000285116 GCC2Q8IWJ2 1684 aa14.75□□□□□ -0.05
SKA1-201ENST00000285116 PPP1R15AO75807 674 aaPredicted RBP14.75□□□□□ -0.05
SKA1-201ENST00000285116 CCDC18Q5T9S5 1454 aa14.74□□□□□ -0.05
SKA1-201ENST00000285116 ITGAEP38570 1179 aa14.74□□□□□ -0.05
SKA1-201ENST00000285116 UGGT2Q9NYU1 1516 aa14.73□□□□□ -0.05
SKA1-201ENST00000285116 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
SKA1-201ENST00000285116 MYOM3Q5VTT5 1437 aa14.72□□□□□ -0.05
SKA1-201ENST00000285116 AKNAQ7Z591 1439 aa14.72□□□□□ -0.05
SKA1-201ENST00000285116 TCOF1Q13428 1488 aaKnown RBP14.72□□□□□ -0.05
SKA1-201ENST00000285116 HECW1Q76N89 1606 aa14.71□□□□□ -0.05
SKA1-201ENST00000285116 FAM50AQ14320 339 aaKnown RBP14.71□□□□□ -0.05
SKA1-201ENST00000285116 NCOA2Q15596 1464 aa14.7□□□□□ -0.06
SKA1-201ENST00000285116 KDM5BQ9UGL1 1544 aa14.7□□□□□ -0.06
SKA1-201ENST00000285116 TARBP1Q13395 1621 aaKnown RBP14.69□□□□□ -0.06
SKA1-201ENST00000285116 GAPVD1Q14C86 1478 aa14.69□□□□□ -0.06
SKA1-201ENST00000285116 NAIPQ13075 1403 aa14.68□□□□□ -0.06
SKA1-201ENST00000285116 PHF23Q9BUL5 403 aaPredicted RBP14.68□□□□□ -0.06
SKA1-201ENST00000285116 PTPRKQ15262 1439 aa14.67□□□□□ -0.06
SKA1-201ENST00000285116 SIN3AQ96ST3 1273 aa14.67□□□□□ -0.06
SKA1-201ENST00000285116 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
SKA1-201ENST00000285116 PBRM1Q86U86 1689 aa14.66□□□□□ -0.06
SKA1-201ENST00000285116 PDS5BQ9NTI5 1447 aa14.63□□□□□ -0.07
SKA1-201ENST00000285116 MAGI3Q5TCQ9 1506 aa14.62□□□□□ -0.07
SKA1-201ENST00000285116 TONSLQ96HA7 1378 aa14.62□□□□□ -0.07
SKA1-201ENST00000285116 FKBP8Q14318 412 aa14.61□□□□□ -0.07
SKA1-201ENST00000285116 BCANQ96GW7 911 aa14.6□□□□□ -0.07
SKA1-201ENST00000285116 MIA2Q96PC5 1412 aa14.6□□□□□ -0.07
SKA1-201ENST00000285116 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
SKA1-201ENST00000285116 ADAMTS12P58397 1594 aa14.59□□□□□ -0.07
SKA1-201ENST00000285116 KCNH8Q96L42 1107 aa14.59□□□□□ -0.07
SKA1-201ENST00000285116 IQGAP2Q13576 1575 aa14.59□□□□□ -0.07
SKA1-201ENST00000285116 RBM19Q9Y4C8 960 aaKnown RBP14.59□□□□□ -0.07
SKA1-201ENST00000285116 WDR62O43379 1518 aa14.57□□□□□ -0.08
SKA1-201ENST00000285116 ZNF608Q9ULD9 1512 aaPredicted RBP14.57□□□□□ -0.08
SKA1-201ENST00000285116 NEFLP07196 543 aa14.56□□□□□ -0.08
SKA1-201ENST00000285116 POLR1AO95602 1720 aaPredicted RBP14.56□□□□□ -0.08
SKA1-201ENST00000285116 DENND4BO75064 1496 aaPredicted RBP14.56□□□□□ -0.08
SKA1-201ENST00000285116 ANP32CO43423 234 aa14.56□□□□□ -0.08
SKA1-201ENST00000285116 EPRSP07814 1512 aaKnown RBP14.55□□□□□ -0.08
SKA1-201ENST00000285116 ROCK1Q13464 1354 aa14.51□□□□□ -0.09
SKA1-201ENST00000285116 DNMT1P26358 1616 aaKnown RBP14.5□□□□□ -0.09
SKA1-201ENST00000285116 KDM6BO15054 1643 aa14.49□□□□□ -0.09
SKA1-201ENST00000285116 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
SKA1-201ENST00000285116 KIAA0556O60303 1618 aa14.45□□□□□ -0.1
SKA1-201ENST00000285116 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
SKA1-201ENST00000285116 CNTLNQ9NXG0 1405 aa14.43□□□□□ -0.1
SKA1-201ENST00000285116 ADGBQ8N7X0 1667 aa14.43□□□□□ -0.1
SKA1-201ENST00000285116 RPRD2Q5VT52 1461 aaKnown RBP14.43□□□□□ -0.1
SKA1-201ENST00000285116 NCOA1Q15788 1441 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms