RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 NESP48681 1621 aa16.97■□□□□ 0.31
SLC13A3-201ENST00000279027 POLR3GLQ9BT43 218 aa16.96■□□□□ 0.31
SLC13A3-201ENST00000279027 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
SLC13A3-201ENST00000279027 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
SLC13A3-201ENST00000279027 DHX57Q6P158 1386 aaKnown RBP16.94■□□□□ 0.3
SLC13A3-201ENST00000279027 BCANQ96GW7 911 aa16.92■□□□□ 0.3
SLC13A3-201ENST00000279027 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
SLC13A3-201ENST00000279027 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
SLC13A3-201ENST00000279027 ARHGAP35Q9NRY4 1499 aa16.91■□□□□ 0.3
SLC13A3-201ENST00000279027 ZNF777Q9ULD5 760 aaPredicted RBP16.91■□□□□ 0.3
SLC13A3-201ENST00000279027 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
SLC13A3-201ENST00000279027 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
SLC13A3-201ENST00000279027 ZNF326Q5BKZ1 582 aaKnown RBP16.85■□□□□ 0.29
SLC13A3-201ENST00000279027 FHAD1B1AJZ9 1412 aa16.83■□□□□ 0.28
SLC13A3-201ENST00000279027 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.28
SLC13A3-201ENST00000279027 TONSLQ96HA7 1378 aa16.83■□□□□ 0.28
SLC13A3-201ENST00000279027 PHLDB1Q86UU1 1377 aa16.81■□□□□ 0.28
SLC13A3-201ENST00000279027 SETD5Q9C0A6 1442 aa16.8■□□□□ 0.28
SLC13A3-201ENST00000279027 KCNH8Q96L42 1107 aa16.79■□□□□ 0.28
SLC13A3-201ENST00000279027 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
SLC13A3-201ENST00000279027 ANP32CO43423 234 aa16.78■□□□□ 0.28
SLC13A3-201ENST00000279027 BIVM-ERCC5R4GMW8 1640 aa16.76■□□□□ 0.27
SLC13A3-201ENST00000279027 NEFLP07196 543 aa16.76■□□□□ 0.27
SLC13A3-201ENST00000279027 CHMP7Q8WUX9 453 aaPredicted RBP16.75■□□□□ 0.27
SLC13A3-201ENST00000279027 FOXD1Q16676 465 aa16.74■□□□□ 0.27
SLC13A3-201ENST00000279027 PDS5BQ9NTI5 1447 aa16.73■□□□□ 0.27
SLC13A3-201ENST00000279027 POLA1P09884 1462 aaPredicted RBP16.72■□□□□ 0.27
SLC13A3-201ENST00000279027 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
SLC13A3-201ENST00000279027 RRBP1Q9P2E9 1410 aaKnown RBP16.69■□□□□ 0.26
SLC13A3-201ENST00000279027 LRRC9Q6ZRR7 1453 aa16.68■□□□□ 0.26
SLC13A3-201ENST00000279027 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.26
SLC13A3-201ENST00000279027 CDK11AQ9UQ88 783 aaPredicted RBP16.65■□□□□ 0.26
SLC13A3-201ENST00000279027 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
SLC13A3-201ENST00000279027 FMN1Q68DA7 1419 aa16.64■□□□□ 0.25
SLC13A3-201ENST00000279027 SENP3-EIF4A1A0A087X0R7 540 aa16.63■□□□□ 0.25
SLC13A3-201ENST00000279027 FKBP8Q14318 412 aa16.63■□□□□ 0.25
SLC13A3-201ENST00000279027 MYT1LQ9UL68 1186 aa16.61■□□□□ 0.25
SLC13A3-201ENST00000279027 SLC4A1APQ9BWU0 796 aaKnown RBP16.61■□□□□ 0.25
SLC13A3-201ENST00000279027 PPP1R15AO75807 674 aaPredicted RBP16.61■□□□□ 0.25
SLC13A3-201ENST00000279027 TIAM1Q13009 1591 aa16.58■□□□□ 0.24
SLC13A3-201ENST00000279027 ERCC6Q03468 1493 aa16.57■□□□□ 0.24
SLC13A3-201ENST00000279027 HNRNPUQ00839 825 aaKnown RBP eCLIP16.57■□□□□ 0.242e-6■■■□□ 16.8
SLC13A3-201ENST00000279027 CFDP1Q9UEE9 299 aaPredicted RBP16.57■□□□□ 0.24
SLC13A3-201ENST00000279027 IRX6P78412 446 aaPredicted RBP16.55■□□□□ 0.24
SLC13A3-201ENST00000279027 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
SLC13A3-201ENST00000279027 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
SLC13A3-201ENST00000279027 FAM9BQ8IZU0 186 aa16.54■□□□□ 0.24
SLC13A3-201ENST00000279027 ZNF644Q9H582 1327 aaPredicted RBP16.54■□□□□ 0.24
SLC13A3-201ENST00000279027 URB2Q14146 1524 aaKnown RBP16.53■□□□□ 0.24
SLC13A3-201ENST00000279027 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
SLC13A3-201ENST00000279027 ABCA10Q8WWZ4 1543 aa16.52■□□□□ 0.24
SLC13A3-201ENST00000279027 FGD6Q6ZV73 1430 aa16.52■□□□□ 0.24
SLC13A3-201ENST00000279027 CASKIN1Q8WXD9 1431 aa16.52■□□□□ 0.24
SLC13A3-201ENST00000279027 SUPT16HQ9Y5B9 1047 aaKnown RBP16.51■□□□□ 0.23
SLC13A3-201ENST00000279027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.232e-8■■■□□ 18.6
SLC13A3-201ENST00000279027 EIF4G2P78344 907 aaKnown RBP eCLIP16.5■□□□□ 0.232e-8■■■■■ 35.8
SLC13A3-201ENST00000279027 MPHOSPH9Q99550 1183 aa16.49■□□□□ 0.23
SLC13A3-201ENST00000279027 HSPA5P11021 654 aaKnown RBP16.48■□□□□ 0.23
SLC13A3-201ENST00000279027 PLEKHD1A6NEE1 506 aa16.47■□□□□ 0.23
SLC13A3-201ENST00000279027 CCDC18Q5T9S5 1454 aa16.47■□□□□ 0.23
SLC13A3-201ENST00000279027 NCOA2Q15596 1464 aa16.46■□□□□ 0.22
SLC13A3-201ENST00000279027 L3MBTL2Q969R5 705 aa16.45■□□□□ 0.22
SLC13A3-201ENST00000279027 FYCO1Q9BQS8 1478 aa16.44■□□□□ 0.22
SLC13A3-201ENST00000279027 TSPY4P0CV99 314 aa16.43■□□□□ 0.22
SLC13A3-201ENST00000279027 TSPY10P0CW01 314 aa16.43■□□□□ 0.22
SLC13A3-201ENST00000279027 TIMELESSQ9UNS1 1208 aa16.42■□□□□ 0.22
SLC13A3-201ENST00000279027 WDR97A6NE52 1622 aa16.41■□□□□ 0.22
SLC13A3-201ENST00000279027 MYOM3Q5VTT5 1437 aa16.41■□□□□ 0.22
SLC13A3-201ENST00000279027 RGL3Q3MIN7 710 aa16.41■□□□□ 0.22
SLC13A3-201ENST00000279027 MRS2Q9HD23 443 aa16.41■□□□□ 0.22
SLC13A3-201ENST00000279027 JPH4Q96JJ6 628 aa16.41■□□□□ 0.22
SLC13A3-201ENST00000279027 SALL2Q9Y467 1007 aaPredicted RBP16.38■□□□□ 0.21
SLC13A3-201ENST00000279027 PTPRKQ15262 1439 aa16.37■□□□□ 0.21
SLC13A3-201ENST00000279027 PKD2Q13563 968 aa16.36■□□□□ 0.21
SLC13A3-201ENST00000279027 CDK13Q14004 1512 aaKnown RBP16.35■□□□□ 0.21
SLC13A3-201ENST00000279027 EFCAB5A4FU69 1503 aa16.35■□□□□ 0.21
SLC13A3-201ENST00000279027 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
SLC13A3-201ENST00000279027 ZNF608Q9ULD9 1512 aaPredicted RBP16.34■□□□□ 0.21
SLC13A3-201ENST00000279027 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
SLC13A3-201ENST00000279027 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.213e-6■■■■□ 21.2
SLC13A3-201ENST00000279027 UACAQ9BZF9 1416 aa16.32■□□□□ 0.2
SLC13A3-201ENST00000279027 GRIN2BQ13224 1484 aa16.3■□□□□ 0.2
SLC13A3-201ENST00000279027 NAIPQ13075 1403 aa16.3■□□□□ 0.2
SLC13A3-201ENST00000279027 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
SLC13A3-201ENST00000279027 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
SLC13A3-201ENST00000279027 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.2
SLC13A3-201ENST00000279027 CUL7Q14999 1698 aa16.27■□□□□ 0.2
SLC13A3-201ENST00000279027 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.19
SLC13A3-201ENST00000279027 HFM1A2PYH4 1435 aa16.27■□□□□ 0.19
SLC13A3-201ENST00000279027 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
SLC13A3-201ENST00000279027 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
SLC13A3-201ENST00000279027 CCER2I3L3R5 266 aa16.26■□□□□ 0.19
SLC13A3-201ENST00000279027 ERICH6Q7L0X2 663 aa16.26■□□□□ 0.19
SLC13A3-201ENST00000279027 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
SLC13A3-201ENST00000279027 SENP3Q9H4L4 574 aaPredicted RBP16.24■□□□□ 0.19
SLC13A3-201ENST00000279027 NUP155O75694 1391 aa16.24■□□□□ 0.19
SLC13A3-201ENST00000279027 EPRSP07814 1512 aaKnown RBP16.23■□□□□ 0.19
SLC13A3-201ENST00000279027 CARMIL2Q6F5E8 1435 aa16.23■□□□□ 0.19
SLC13A3-201ENST00000279027 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
SLC13A3-201ENST00000279027 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms