RNA–Protein interactions for RNA: ENST00000275300.2

SLC22A3-201, Transcript of solute carrier family 22 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A3, Length 3,348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A3-201ENST00000275300 CLSPNQ9HAW4 1339 aa24.54■■□□□ 1.52
SLC22A3-201ENST00000275300 ERICH3Q5RHP9 1530 aa24.54■■□□□ 1.52
SLC22A3-201ENST00000275300 CFTRP13569 1480 aa24.54■■□□□ 1.52
SLC22A3-201ENST00000275300 CHIC2Q9UKJ5 165 aa24.53■■□□□ 1.52
SLC22A3-201ENST00000275300 FKBP8Q14318 412 aa24.53■■□□□ 1.52
SLC22A3-201ENST00000275300 BIVM-ERCC5R4GMW8 1640 aa24.52■■□□□ 1.52
SLC22A3-201ENST00000275300 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
SLC22A3-201ENST00000275300 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
SLC22A3-201ENST00000275300 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
SLC22A3-201ENST00000275300 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
SLC22A3-201ENST00000275300 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
SLC22A3-201ENST00000275300 RRP7BPQ9NSQ0 103 aa24.41■■□□□ 1.5
SLC22A3-201ENST00000275300 IRX6P78412 446 aaPredicted RBP24.4■■□□□ 1.5
SLC22A3-201ENST00000275300 TDRD9Q8NDG6 1382 aaKnown RBP24.37■■□□□ 1.49
SLC22A3-201ENST00000275300 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
SLC22A3-201ENST00000275300 MYT1Q01538 1121 aa24.37■■□□□ 1.49
SLC22A3-201ENST00000275300 NESP48681 1621 aa24.36■■□□□ 1.49
SLC22A3-201ENST00000275300 TSHZ2Q9NRE2 1034 aa24.36■■□□□ 1.49
SLC22A3-201ENST00000275300 LRRC9Q6ZRR7 1453 aa24.36■■□□□ 1.49
SLC22A3-201ENST00000275300 SENP3-EIF4A1A0A087X0R7 540 aa24.35■■□□□ 1.49
SLC22A3-201ENST00000275300 MAPKBP1O60336 1514 aa24.35■■□□□ 1.49
SLC22A3-201ENST00000275300 FOXD1Q16676 465 aa24.34■■□□□ 1.49
SLC22A3-201ENST00000275300 HMGXB3Q12766 1538 aa24.33■■□□□ 1.48
SLC22A3-201ENST00000275300 ANP32CO43423 234 aa24.32■■□□□ 1.48
SLC22A3-201ENST00000275300 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
SLC22A3-201ENST00000275300 MTUS2Q5JR59 1369 aa24.29■■□□□ 1.48
SLC22A3-201ENST00000275300 TIAM1Q13009 1591 aa24.28■■□□□ 1.48
SLC22A3-201ENST00000275300 TONSLQ96HA7 1378 aa24.27■■□□□ 1.48
SLC22A3-201ENST00000275300 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
SLC22A3-201ENST00000275300 NEFLP07196 543 aa24.22■■□□□ 1.47
SLC22A3-201ENST00000275300 POLR3GLQ9BT43 218 aa24.21■■□□□ 1.47
SLC22A3-201ENST00000275300 FHAD1B1AJZ9 1412 aa24.19■■□□□ 1.46
SLC22A3-201ENST00000275300 PCF11O94913 1555 aaKnown RBP24.19■■□□□ 1.46
SLC22A3-201ENST00000275300 HNRNPUQ00839 825 aaKnown RBP eCLIP24.17■■□□□ 1.46
SLC22A3-201ENST00000275300 PTPRKQ15262 1439 aa24.13■■□□□ 1.45
SLC22A3-201ENST00000275300 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
SLC22A3-201ENST00000275300 ZNF326Q5BKZ1 582 aaKnown RBP24.09■■□□□ 1.45
SLC22A3-201ENST00000275300 CC2D2AQ9P2K1 1620 aa24.08■■□□□ 1.44
SLC22A3-201ENST00000275300 FAM9BQ8IZU0 186 aa24.06■■□□□ 1.44
SLC22A3-201ENST00000275300 CCDC184Q52MB2 194 aa24.05■■□□□ 1.44
SLC22A3-201ENST00000275300 FGD6Q6ZV73 1430 aa24.03■■□□□ 1.44
SLC22A3-201ENST00000275300 HSPA5P11021 654 aaKnown RBP24.03■■□□□ 1.44
SLC22A3-201ENST00000275300 AQRO60306 1485 aaKnown RBP eCLIP24.02■■□□□ 1.44
SLC22A3-201ENST00000275300 CCDC18Q5T9S5 1454 aa24.01■■□□□ 1.43
SLC22A3-201ENST00000275300 TOPBP1Q92547 1522 aa24.01■■□□□ 1.43
SLC22A3-201ENST00000275300 ZNF777Q9ULD5 760 aaPredicted RBP23.98■■□□□ 1.43
SLC22A3-201ENST00000275300 CASKIN1Q8WXD9 1431 aa23.96■■□□□ 1.43
SLC22A3-201ENST00000275300 ZNF644Q9H582 1327 aaPredicted RBP23.96■■□□□ 1.43
SLC22A3-201ENST00000275300 FBLN2P98095 1184 aa23.94■■□□□ 1.42
SLC22A3-201ENST00000275300 L3MBTL2Q969R5 705 aa23.93■■□□□ 1.42
SLC22A3-201ENST00000275300 C11orf95C9JLR9 678 aaPredicted RBP23.93■■□□□ 1.42
SLC22A3-201ENST00000275300 RBM19Q9Y4C8 960 aaKnown RBP23.93■■□□□ 1.42
SLC22A3-201ENST00000275300 WASHC2AQ641Q2 1341 aa23.91■■□□□ 1.42
SLC22A3-201ENST00000275300 FMN1Q68DA7 1419 aa23.9■■□□□ 1.42
SLC22A3-201ENST00000275300 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
SLC22A3-201ENST00000275300 FYCO1Q9BQS8 1478 aa23.88■■□□□ 1.41
SLC22A3-201ENST00000275300 MPHOSPH9Q99550 1183 aa23.88■■□□□ 1.41
SLC22A3-201ENST00000275300 CCER2I3L3R5 266 aa23.87■■□□□ 1.41
SLC22A3-201ENST00000275300 NAIPQ13075 1403 aa23.86■■□□□ 1.41
SLC22A3-201ENST00000275300 ABCA10Q8WWZ4 1543 aa23.86■■□□□ 1.41
SLC22A3-201ENST00000275300 TIMELESSQ9UNS1 1208 aa23.85■■□□□ 1.41
SLC22A3-201ENST00000275300 MAP3K1Q13233 1512 aa23.85■■□□□ 1.41
SLC22A3-201ENST00000275300 EIF4G2P78344 907 aaKnown RBP eCLIP23.84■■□□□ 1.41
SLC22A3-201ENST00000275300 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
SLC22A3-201ENST00000275300 ANP32EQ9BTT0 268 aa23.83■■□□□ 1.41
SLC22A3-201ENST00000275300 GAPVD1Q14C86 1478 aa23.83■■□□□ 1.4
SLC22A3-201ENST00000275300 MRS2Q9HD23 443 aa23.82■■□□□ 1.4
SLC22A3-201ENST00000275300 SLC4A1APQ9BWU0 796 aaKnown RBP23.82■■□□□ 1.4
SLC22A3-201ENST00000275300 UACAQ9BZF9 1416 aa23.81■■□□□ 1.4
SLC22A3-201ENST00000275300 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
SLC22A3-201ENST00000275300 DNMBPQ6XZF7 1577 aa23.8■■□□□ 1.4
SLC22A3-201ENST00000275300 NBPF8Q3BBV2 869 aa23.79■■□□□ 1.4
SLC22A3-201ENST00000275300 HFM1A2PYH4 1435 aa23.78■■□□□ 1.4
SLC22A3-201ENST00000275300 B4GALNT3Q6L9W6 998 aa23.77■■□□□ 1.4
SLC22A3-201ENST00000275300 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
SLC22A3-201ENST00000275300 CFAP43Q8NDM7 1665 aa23.76■■□□□ 1.39
SLC22A3-201ENST00000275300 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
SLC22A3-201ENST00000275300 CDK13Q14004 1512 aaKnown RBP23.74■■□□□ 1.39
SLC22A3-201ENST00000275300 SALL2Q9Y467 1007 aaPredicted RBP23.72■■□□□ 1.39
SLC22A3-201ENST00000275300 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
SLC22A3-201ENST00000275300 PTPN23Q9H3S7 1636 aa23.7■■□□□ 1.38
SLC22A3-201ENST00000275300 MAGI3Q5TCQ9 1506 aa23.7■■□□□ 1.38
SLC22A3-201ENST00000275300 EFCAB5A4FU69 1503 aa23.67■■□□□ 1.38
SLC22A3-201ENST00000275300 PRDM2Q13029 1718 aa23.66■■□□□ 1.38
SLC22A3-201ENST00000275300 KDM6BO15054 1643 aa23.65■■□□□ 1.38
SLC22A3-201ENST00000275300 CDK11AQ9UQ88 783 aaPredicted RBP23.64■■□□□ 1.38
SLC22A3-201ENST00000275300 MSH5O43196 834 aa23.64■■□□□ 1.37
SLC22A3-201ENST00000275300 PRKRIP1Q9H875 184 aaPredicted RBP23.63■■□□□ 1.37
SLC22A3-201ENST00000275300 GRIN2BQ13224 1484 aa23.62■■□□□ 1.37
SLC22A3-201ENST00000275300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.6■■□□□ 1.37
SLC22A3-201ENST00000275300 CFDP1Q9UEE9 299 aaPredicted RBP23.59■■□□□ 1.37
SLC22A3-201ENST00000275300 ERICH6Q7L0X2 663 aa23.57■■□□□ 1.36
SLC22A3-201ENST00000275300 LRRIQ1Q96JM4 1722 aa23.57■■□□□ 1.36
SLC22A3-201ENST00000275300 KIF7Q2M1P5 1343 aa23.57■■□□□ 1.36
SLC22A3-201ENST00000275300 CTTNBP2Q8WZ74 1663 aa23.56■■□□□ 1.36
SLC22A3-201ENST00000275300 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
SLC22A3-201ENST00000275300 PKD2Q13563 968 aa23.54■■□□□ 1.36
SLC22A3-201ENST00000275300 CUL7Q14999 1698 aa23.53■■□□□ 1.36
SLC22A3-201ENST00000275300 CCDC7Q96M83 1385 aa23.52■■□□□ 1.36
SLC22A3-201ENST00000275300 EPRSP07814 1512 aaKnown RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms