RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
HMGCLL1-201ENST00000274901 RAPGEF2Q9Y4G8 1499 aa12.98□□□□□ -0.33
HMGCLL1-201ENST00000274901 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
HMGCLL1-201ENST00000274901 IRX6P78412 446 aaPredicted RBP12.97□□□□□ -0.33
HMGCLL1-201ENST00000274901 PRDM2Q13029 1718 aa12.97□□□□□ -0.33
HMGCLL1-201ENST00000274901 PPP1R15AO75807 674 aaPredicted RBP12.96□□□□□ -0.33
HMGCLL1-201ENST00000274901 MAPKBP1O60336 1514 aa12.96□□□□□ -0.33
HMGCLL1-201ENST00000274901 FANCD2Q9BXW9 1451 aa12.96□□□□□ -0.34
HMGCLL1-201ENST00000274901 WDR97A6NE52 1622 aa12.95□□□□□ -0.34
HMGCLL1-201ENST00000274901 CUX2O14529 1486 aa12.94□□□□□ -0.34
HMGCLL1-201ENST00000274901 HIRIP3Q9BW71 556 aaPredicted RBP12.93□□□□□ -0.34
HMGCLL1-201ENST00000274901 RRBP1Q9P2E9 1410 aaKnown RBP12.91□□□□□ -0.34
HMGCLL1-201ENST00000274901 CDK11AQ9UQ88 783 aaPredicted RBP12.9□□□□□ -0.34
HMGCLL1-201ENST00000274901 SALL2Q9Y467 1007 aaPredicted RBP12.89□□□□□ -0.35
HMGCLL1-201ENST00000274901 FGD5Q6ZNL6 1462 aa12.88□□□□□ -0.35
HMGCLL1-201ENST00000274901 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
HMGCLL1-201ENST00000274901 CCER2I3L3R5 266 aa12.88□□□□□ -0.35
HMGCLL1-201ENST00000274901 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
HMGCLL1-201ENST00000274901 SIN3AQ96ST3 1273 aa12.86□□□□□ -0.35
HMGCLL1-201ENST00000274901 RAB3GAP2Q9H2M9 1393 aa12.86□□□□□ -0.35
HMGCLL1-201ENST00000274901 NBR1Q14596 966 aa12.85□□□□□ -0.35
HMGCLL1-201ENST00000274901 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
HMGCLL1-201ENST00000274901 PAK3O75914 559 aaPredicted RBP12.85□□□□□ -0.35
HMGCLL1-201ENST00000274901 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
HMGCLL1-201ENST00000274901 CCNB3Q8WWL7 1395 aa12.83□□□□□ -0.36
HMGCLL1-201ENST00000274901 RAD54L2Q9Y4B4 1467 aa12.82□□□□□ -0.36
HMGCLL1-201ENST00000274901 ANP32CO43423 234 aa12.82□□□□□ -0.36
HMGCLL1-201ENST00000274901 CCDC136Q96JN2 1154 aa12.82□□□□□ -0.36
HMGCLL1-201ENST00000274901 TOPBP1Q92547 1522 aa12.82□□□□□ -0.36
HMGCLL1-201ENST00000274901 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
HMGCLL1-201ENST00000274901 PDS5BQ9NTI5 1447 aa12.8□□□□□ -0.36
HMGCLL1-201ENST00000274901 DNMBPQ6XZF7 1577 aa12.8□□□□□ -0.36
HMGCLL1-201ENST00000274901 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
HMGCLL1-201ENST00000274901 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
HMGCLL1-201ENST00000274901 POLA1P09884 1462 aaPredicted RBP12.78□□□□□ -0.36
HMGCLL1-201ENST00000274901 IGF1RP08069 1367 aa12.78□□□□□ -0.36
HMGCLL1-201ENST00000274901 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
HMGCLL1-201ENST00000274901 IL27Q8NEV9 243 aa12.78□□□□□ -0.36
HMGCLL1-201ENST00000274901 KIF21AQ7Z4S6 1674 aa12.77□□□□□ -0.37
HMGCLL1-201ENST00000274901 B4GALNT3Q6L9W6 998 aa12.76□□□□□ -0.37
HMGCLL1-201ENST00000274901 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
HMGCLL1-201ENST00000274901 ERICH3Q5RHP9 1530 aa12.74□□□□□ -0.37
HMGCLL1-201ENST00000274901 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
HMGCLL1-201ENST00000274901 CARMIL1Q5VZK9 1371 aa12.73□□□□□ -0.37
HMGCLL1-201ENST00000274901 SETD5Q9C0A6 1442 aa12.72□□□□□ -0.37
HMGCLL1-201ENST00000274901 ERICH6BQ5W0A0 696 aa12.71□□□□□ -0.37
HMGCLL1-201ENST00000274901 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
HMGCLL1-201ENST00000274901 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
HMGCLL1-201ENST00000274901 ABCA10Q8WWZ4 1543 aa12.7□□□□□ -0.38
HMGCLL1-201ENST00000274901 CCDC184Q52MB2 194 aa12.68□□□□□ -0.38
HMGCLL1-201ENST00000274901 ARHGAP35Q9NRY4 1499 aa12.64□□□□□ -0.39
HMGCLL1-201ENST00000274901 MRC2Q9UBG0 1479 aa12.63□□□□□ -0.39
HMGCLL1-201ENST00000274901 PHLDB1Q86UU1 1377 aa12.62□□□□□ -0.39
HMGCLL1-201ENST00000274901 TIMELESSQ9UNS1 1208 aa12.62□□□□□ -0.39
HMGCLL1-201ENST00000274901 P3H3Q8IVL6 736 aa12.61□□□□□ -0.39
HMGCLL1-201ENST00000274901 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
HMGCLL1-201ENST00000274901 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
HMGCLL1-201ENST00000274901 GAPVD1Q14C86 1478 aa12.61□□□□□ -0.39
HMGCLL1-201ENST00000274901 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
HMGCLL1-201ENST00000274901 UBE2Q2Q8WVN8 375 aa12.6□□□□□ -0.39
HMGCLL1-201ENST00000274901 FAM50AQ14320 339 aaKnown RBP12.59□□□□□ -0.39
HMGCLL1-201ENST00000274901 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.39
HMGCLL1-201ENST00000274901 TIAM1Q13009 1591 aa12.58□□□□□ -0.4
HMGCLL1-201ENST00000274901 WASHC2AQ641Q2 1341 aa12.58□□□□□ -0.4
HMGCLL1-201ENST00000274901 TARBP1Q13395 1621 aaKnown RBP12.57□□□□□ -0.4
HMGCLL1-201ENST00000274901 ABCA5Q8WWZ7 1642 aa12.57□□□□□ -0.4
HMGCLL1-201ENST00000274901 KDM5BQ9UGL1 1544 aa12.55□□□□□ -0.4
HMGCLL1-201ENST00000274901 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
HMGCLL1-201ENST00000274901 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
HMGCLL1-201ENST00000274901 TONSLQ96HA7 1378 aa12.54□□□□□ -0.4
HMGCLL1-201ENST00000274901 CUL7Q14999 1698 aa12.54□□□□□ -0.4
HMGCLL1-201ENST00000274901 FAM9BQ8IZU0 186 aa12.54□□□□□ -0.4
HMGCLL1-201ENST00000274901 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
HMGCLL1-201ENST00000274901 ZNF608Q9ULD9 1512 aaPredicted RBP12.53□□□□□ -0.4
HMGCLL1-201ENST00000274901 AKNAQ7Z591 1439 aa12.53□□□□□ -0.4
HMGCLL1-201ENST00000274901 WDR62O43379 1518 aa12.52□□□□□ -0.41
HMGCLL1-201ENST00000274901 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
HMGCLL1-201ENST00000274901 ATP1B4Q9UN42 357 aaPredicted RBP12.51□□□□□ -0.41
HMGCLL1-201ENST00000274901 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
HMGCLL1-201ENST00000274901 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
HMGCLL1-201ENST00000274901 BRPF3Q9ULD4 1205 aa12.5□□□□□ -0.41
HMGCLL1-201ENST00000274901 HSPA5P11021 654 aaKnown RBP12.49□□□□□ -0.41
HMGCLL1-201ENST00000274901 FHOD3Q2V2M9 1422 aa12.49□□□□□ -0.41
HMGCLL1-201ENST00000274901 WASHC2CQ9Y4E1 1318 aa12.48□□□□□ -0.41
HMGCLL1-201ENST00000274901 NCOA2Q15596 1464 aa12.48□□□□□ -0.41
HMGCLL1-201ENST00000274901 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
HMGCLL1-201ENST00000274901 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
HMGCLL1-201ENST00000274901 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
HMGCLL1-201ENST00000274901 NEFMP07197 916 aa12.47□□□□□ -0.41
HMGCLL1-201ENST00000274901 CNTLNQ9NXG0 1405 aa12.47□□□□□ -0.41
HMGCLL1-201ENST00000274901 PRKRIP1Q9H875 184 aaPredicted RBP12.47□□□□□ -0.41
HMGCLL1-201ENST00000274901 MRS2Q9HD23 443 aa12.47□□□□□ -0.41
HMGCLL1-201ENST00000274901 PBRM1Q86U86 1689 aa12.47□□□□□ -0.41
HMGCLL1-201ENST00000274901 NPM2Q86SE8 214 aaKnown RBP12.46□□□□□ -0.41
HMGCLL1-201ENST00000274901 THOC2Q8NI27 1593 aaKnown RBP12.46□□□□□ -0.41
HMGCLL1-201ENST00000274901 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
HMGCLL1-201ENST00000274901 GRIN2BQ13224 1484 aa12.45□□□□□ -0.42
HMGCLL1-201ENST00000274901 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
HMGCLL1-201ENST00000274901 CCDC18Q5T9S5 1454 aa12.44□□□□□ -0.42
HMGCLL1-201ENST00000274901 RNF123Q5XPI4 1314 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms