RNA–Protein interactions for RNA: ENST00000274432.12

SPATA9-201, Transcript of spermatogenesis associated 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPATA9, Length 1,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-201ENST00000274432 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
SPATA9-201ENST00000274432 CHRDL2Q6WN34 429 aa11.45□□□□□ -0.58
SPATA9-201ENST00000274432 ZNF608Q9ULD9 1512 aaPredicted RBP11.44□□□□□ -0.58
SPATA9-201ENST00000274432 PRDM2Q13029 1718 aa11.42□□□□□ -0.58
SPATA9-201ENST00000274432 AQRO60306 1485 aaKnown RBP eCLIP11.4□□□□□ -0.58
SPATA9-201ENST00000274432 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
SPATA9-201ENST00000274432 TDRD9Q8NDG6 1382 aaKnown RBP11.4□□□□□ -0.59
SPATA9-201ENST00000274432 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
SPATA9-201ENST00000274432 SOGA1O94964 1423 aa11.38□□□□□ -0.59
SPATA9-201ENST00000274432 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
SPATA9-201ENST00000274432 ABCC8Q09428 1581 aa11.37□□□□□ -0.59
SPATA9-201ENST00000274432 DNMBPQ6XZF7 1577 aa11.37□□□□□ -0.59
SPATA9-201ENST00000274432 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
SPATA9-201ENST00000274432 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
SPATA9-201ENST00000274432 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
SPATA9-201ENST00000274432 REM2Q8IYK8 340 aaPredicted RBP11.35□□□□□ -0.59
SPATA9-201ENST00000274432 POLA1P09884 1462 aaPredicted RBP11.35□□□□□ -0.59
SPATA9-201ENST00000274432 CUX1P39880 1505 aa11.34□□□□□ -0.59
SPATA9-201ENST00000274432 FGD5Q6ZNL6 1462 aa11.32□□□□□ -0.6
SPATA9-201ENST00000274432 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
SPATA9-201ENST00000274432 TARBP1Q13395 1621 aaKnown RBP11.29□□□□□ -0.6
SPATA9-201ENST00000274432 CHMP7Q8WUX9 453 aaPredicted RBP11.28□□□□□ -0.6
SPATA9-201ENST00000274432 EIF4G3O43432 1585 aaKnown RBP11.26□□□□□ -0.61
SPATA9-201ENST00000274432 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
SPATA9-201ENST00000274432 CYB5RLQ6IPT4 315 aa11.22□□□□□ -0.61
SPATA9-201ENST00000274432 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
SPATA9-201ENST00000274432 PITPNM1O00562 1244 aa11.2□□□□□ -0.62
SPATA9-201ENST00000274432 ZNF692Q9BU19 519 aaPredicted RBP11.2□□□□□ -0.62
SPATA9-201ENST00000274432 GAPVD1Q14C86 1478 aa11.19□□□□□ -0.62
SPATA9-201ENST00000274432 SYNJ1O43426 1573 aa11.19□□□□□ -0.62
SPATA9-201ENST00000274432 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
SPATA9-201ENST00000274432 CHD1O14646 1710 aa11.16□□□□□ -0.62
SPATA9-201ENST00000274432 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
SPATA9-201ENST00000274432 ABCA10Q8WWZ4 1543 aa11.15□□□□□ -0.62
SPATA9-201ENST00000274432 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
SPATA9-201ENST00000274432 SPDYE1Q8NFV5 336 aaPredicted RBP11.15□□□□□ -0.62
SPATA9-201ENST00000274432 TOP2BQ02880 1626 aa11.14□□□□□ -0.63
SPATA9-201ENST00000274432 FXR2P51116 673 aaKnown RBP eCLIP11.13□□□□□ -0.63
SPATA9-201ENST00000274432 RIMBP3CA6NJZ7 1639 aa11.12□□□□□ -0.63
SPATA9-201ENST00000274432 RIMBP3BA6NNM3 1639 aa11.12□□□□□ -0.63
SPATA9-201ENST00000274432 RIMBP3Q9UFD9 1639 aa11.12□□□□□ -0.63
SPATA9-201ENST00000274432 BIVM-ERCC5R4GMW8 1640 aa11.11□□□□□ -0.63
SPATA9-201ENST00000274432 ARHGEF11O15085 1522 aa11.1□□□□□ -0.63
SPATA9-201ENST00000274432 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
SPATA9-201ENST00000274432 MAGI1Q96QZ7 1491 aaPredicted RBP11.1□□□□□ -0.63
SPATA9-201ENST00000274432 WDR97A6NE52 1622 aa11.09□□□□□ -0.63
SPATA9-201ENST00000274432 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
SPATA9-201ENST00000274432 FKBP8Q14318 412 aa11.08□□□□□ -0.64
SPATA9-201ENST00000274432 ABCA5Q8WWZ7 1642 aa11.07□□□□□ -0.64
SPATA9-201ENST00000274432 IGF1RP08069 1367 aa11.04□□□□□ -0.64
SPATA9-201ENST00000274432 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
SPATA9-201ENST00000274432 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
SPATA9-201ENST00000274432 TTBK1Q5TCY1 1321 aaPredicted RBP11.03□□□□□ -0.64
SPATA9-201ENST00000274432 GRIN2AQ12879 1464 aa11.02□□□□□ -0.65
SPATA9-201ENST00000274432 ARAP1Q96P48 1450 aa11.02□□□□□ -0.65
SPATA9-201ENST00000274432 JPH4Q96JJ6 628 aa11.02□□□□□ -0.65
SPATA9-201ENST00000274432 CLASP1Q7Z460 1538 aa11.01□□□□□ -0.65
SPATA9-201ENST00000274432 KIF27Q86VH2 1401 aa11.01□□□□□ -0.65
SPATA9-201ENST00000274432 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
SPATA9-201ENST00000274432 ERICH3Q5RHP9 1530 aa10.99□□□□□ -0.65
SPATA9-201ENST00000274432 ADAMTS12P58397 1594 aa10.99□□□□□ -0.65
SPATA9-201ENST00000274432 SP7Q8TDD2 431 aaPredicted RBP10.98□□□□□ -0.65
SPATA9-201ENST00000274432 CEP170Q5SW79 1584 aa10.98□□□□□ -0.65
SPATA9-201ENST00000274432 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
SPATA9-201ENST00000274432 HAX1O00165 279 aa10.97□□□□□ -0.65
SPATA9-201ENST00000274432 CARMIL1Q5VZK9 1371 aa10.97□□□□□ -0.65
SPATA9-201ENST00000274432 NUP160Q12769 1436 aa10.96□□□□□ -0.65
SPATA9-201ENST00000274432 FAM9AQ8IZU1 332 aaPredicted RBP10.96□□□□□ -0.65
SPATA9-201ENST00000274432 PRG4Q92954 1404 aaPredicted RBP10.94□□□□□ -0.66
SPATA9-201ENST00000274432 PRKAR2AP13861 404 aaKnown RBP10.93□□□□□ -0.66
SPATA9-201ENST00000274432 PRR29P0C7W0 189 aa10.91□□□□□ -0.66
SPATA9-201ENST00000274432 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
SPATA9-201ENST00000274432 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
SPATA9-201ENST00000274432 KIAA0586Q9BVV6 1533 aa10.85□□□□□ -0.67
SPATA9-201ENST00000274432 NPM1P06748 294 aaKnown RBP eCLIP10.85□□□□□ -0.67
SPATA9-201ENST00000274432 P3H3Q8IVL6 736 aa10.84□□□□□ -0.67
SPATA9-201ENST00000274432 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
SPATA9-201ENST00000274432 RAPGEF2Q9Y4G8 1499 aa10.83□□□□□ -0.68
SPATA9-201ENST00000274432 SHROOM2Q13796 1616 aa10.83□□□□□ -0.68
SPATA9-201ENST00000274432 CUL7Q14999 1698 aa10.82□□□□□ -0.68
SPATA9-201ENST00000274432 PTPRGP23470 1445 aa10.81□□□□□ -0.68
SPATA9-201ENST00000274432 FAM69CQ0P6D2 419 aa10.79□□□□□ -0.68
SPATA9-201ENST00000274432 CHADLQ6NUI6 762 aa10.79□□□□□ -0.68
SPATA9-201ENST00000274432 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
SPATA9-201ENST00000274432 ARID3CA6NKF2 412 aa10.77□□□□□ -0.69
SPATA9-201ENST00000274432 CARMIL2Q6F5E8 1435 aa10.76□□□□□ -0.69
SPATA9-201ENST00000274432 TNIKQ9UKE5 1360 aa10.76□□□□□ -0.69
SPATA9-201ENST00000274432 IQGAP2Q13576 1575 aa10.74□□□□□ -0.69
SPATA9-201ENST00000274432 PRXQ9BXM0 1461 aa10.74□□□□□ -0.69
SPATA9-201ENST00000274432 EVX2Q03828 476 aa10.73□□□□□ -0.69
SPATA9-201ENST00000274432 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
SPATA9-201ENST00000274432 DISP1Q96F81 1524 aa10.72□□□□□ -0.69
SPATA9-201ENST00000274432 ADCY10Q96PN6 1610 aa10.7□□□□□ -0.7
SPATA9-201ENST00000274432 KCNH8Q96L42 1107 aa10.7□□□□□ -0.7
SPATA9-201ENST00000274432 UACAQ9BZF9 1416 aa10.68□□□□□ -0.7
SPATA9-201ENST00000274432 FARP1Q9Y4F1 1045 aaPredicted RBP10.68□□□□□ -0.7
SPATA9-201ENST00000274432 UGGT2Q9NYU1 1516 aa10.67□□□□□ -0.7
SPATA9-201ENST00000274432 ATP1B4Q9UN42 357 aaPredicted RBP10.66□□□□□ -0.7
SPATA9-201ENST00000274432 PLB1Q6P1J6 1458 aa10.66□□□□□ -0.7
SPATA9-201ENST00000274432 CLCN6P51797 869 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms