RNA–Protein interactions for RNA: ENST00000266088.8

SLC5A1-201, Transcript of solute carrier family 5 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A1, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A1-201ENST00000266088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
SLC5A1-201ENST00000266088 MTUS2Q5JR59 1369 aa11.9□□□□□ -0.5
SLC5A1-201ENST00000266088 CUX2O14529 1486 aa11.89□□□□□ -0.51
SLC5A1-201ENST00000266088 RAPGEF2Q9Y4G8 1499 aa11.89□□□□□ -0.51
SLC5A1-201ENST00000266088 STAG3Q9UJ98 1225 aa11.88□□□□□ -0.51
SLC5A1-201ENST00000266088 TSPY4P0CV99 314 aa11.87□□□□□ -0.51
SLC5A1-201ENST00000266088 TSPY10P0CW01 314 aa11.87□□□□□ -0.51
SLC5A1-201ENST00000266088 KCNH8Q96L42 1107 aa11.87□□□□□ -0.51
SLC5A1-201ENST00000266088 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
SLC5A1-201ENST00000266088 SCAF1Q9H7N4 1312 aaKnown RBP11.86□□□□□ -0.51
SLC5A1-201ENST00000266088 FHAD1B1AJZ9 1412 aa11.86□□□□□ -0.51
SLC5A1-201ENST00000266088 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
SLC5A1-201ENST00000266088 PRXQ9BXM0 1461 aa11.85□□□□□ -0.51
SLC5A1-201ENST00000266088 CARMIL1Q5VZK9 1371 aa11.85□□□□□ -0.51
SLC5A1-201ENST00000266088 PDS5BQ9NTI5 1447 aa11.84□□□□□ -0.51
SLC5A1-201ENST00000266088 CUX1P39880 1505 aa11.84□□□□□ -0.51
SLC5A1-201ENST00000266088 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
SLC5A1-201ENST00000266088 FANCD2Q9BXW9 1451 aa11.83□□□□□ -0.52
SLC5A1-201ENST00000266088 PRDM2Q13029 1718 aa11.83□□□□□ -0.52
SLC5A1-201ENST00000266088 CC2D2AQ9P2K1 1620 aa11.82□□□□□ -0.52
SLC5A1-201ENST00000266088 ERCC6Q03468 1493 aa11.82□□□□□ -0.52
SLC5A1-201ENST00000266088 PLEKHD1A6NEE1 506 aa11.8□□□□□ -0.52
SLC5A1-201ENST00000266088 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
SLC5A1-201ENST00000266088 FGD5Q6ZNL6 1462 aa11.78□□□□□ -0.52
SLC5A1-201ENST00000266088 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.53
SLC5A1-201ENST00000266088 NEFMP07197 916 aa11.77□□□□□ -0.53
SLC5A1-201ENST00000266088 ACIN1Q9UKV3 1341 aaKnown RBP11.76□□□□□ -0.53
SLC5A1-201ENST00000266088 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
SLC5A1-201ENST00000266088 BCL11AQ9H165 835 aa11.75□□□□□ -0.53
SLC5A1-201ENST00000266088 SENP3Q9H4L4 574 aaPredicted RBP11.74□□□□□ -0.53
SLC5A1-201ENST00000266088 DDX10Q13206 875 aaKnown RBP11.74□□□□□ -0.53
SLC5A1-201ENST00000266088 LAMC3Q9Y6N6 1575 aa11.74□□□□□ -0.53
SLC5A1-201ENST00000266088 IGF1RP08069 1367 aa11.73□□□□□ -0.53
SLC5A1-201ENST00000266088 CANXP27824 592 aaKnown RBP11.72□□□□□ -0.53
SLC5A1-201ENST00000266088 FMN1Q68DA7 1419 aa11.71□□□□□ -0.54
SLC5A1-201ENST00000266088 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.54
SLC5A1-201ENST00000266088 CFDP1Q9UEE9 299 aaPredicted RBP11.71□□□□□ -0.54
SLC5A1-201ENST00000266088 EFCAB5A4FU69 1503 aa11.7□□□□□ -0.54
SLC5A1-201ENST00000266088 HIRIP3Q9BW71 556 aaPredicted RBP11.69□□□□□ -0.54
SLC5A1-201ENST00000266088 MAP3K1Q13233 1512 aa11.68□□□□□ -0.54
SLC5A1-201ENST00000266088 CUL7Q14999 1698 aa11.68□□□□□ -0.54
SLC5A1-201ENST00000266088 ARAP1Q96P48 1450 aa11.68□□□□□ -0.54
SLC5A1-201ENST00000266088 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
SLC5A1-201ENST00000266088 ABCA10Q8WWZ4 1543 aa11.68□□□□□ -0.54
SLC5A1-201ENST00000266088 TOPBP1Q92547 1522 aa11.67□□□□□ -0.54
SLC5A1-201ENST00000266088 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
SLC5A1-201ENST00000266088 FAM9BQ8IZU0 186 aa11.65□□□□□ -0.54
SLC5A1-201ENST00000266088 SALL2Q9Y467 1007 aaPredicted RBP11.65□□□□□ -0.54
SLC5A1-201ENST00000266088 ARHGAP35Q9NRY4 1499 aa11.64□□□□□ -0.55
SLC5A1-201ENST00000266088 RRBP1Q9P2E9 1410 aaKnown RBP11.62□□□□□ -0.55
SLC5A1-201ENST00000266088 ARID4BQ4LE39 1312 aaPredicted RBP11.62□□□□□ -0.55
SLC5A1-201ENST00000266088 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
SLC5A1-201ENST00000266088 POLA1P09884 1462 aaPredicted RBP11.61□□□□□ -0.55
SLC5A1-201ENST00000266088 TDRD9Q8NDG6 1382 aaKnown RBP11.61□□□□□ -0.55
SLC5A1-201ENST00000266088 FYCO1Q9BQS8 1478 aa11.61□□□□□ -0.55
SLC5A1-201ENST00000266088 PPP1R15AO75807 674 aaPredicted RBP11.6□□□□□ -0.55
SLC5A1-201ENST00000266088 GAPVD1Q14C86 1478 aa11.6□□□□□ -0.55
SLC5A1-201ENST00000266088 TIMELESSQ9UNS1 1208 aa11.6□□□□□ -0.55
SLC5A1-201ENST00000266088 TMC1Q8TDI8 760 aa11.59□□□□□ -0.55
SLC5A1-201ENST00000266088 AQRO60306 1485 aaKnown RBP eCLIP11.59□□□□□ -0.55
SLC5A1-201ENST00000266088 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
SLC5A1-201ENST00000266088 PLEKHG5O94827 1062 aa11.57□□□□□ -0.56
SLC5A1-201ENST00000266088 KANK4Q5T7N3 995 aaPredicted RBP11.57□□□□□ -0.56
SLC5A1-201ENST00000266088 SETD5Q9C0A6 1442 aa11.57□□□□□ -0.56
SLC5A1-201ENST00000266088 EIF4G2P78344 907 aaKnown RBP eCLIP11.57□□□□□ -0.56
SLC5A1-201ENST00000266088 RAD54L2Q9Y4B4 1467 aa11.57□□□□□ -0.56
SLC5A1-201ENST00000266088 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
SLC5A1-201ENST00000266088 LRRC9Q6ZRR7 1453 aa11.56□□□□□ -0.56
SLC5A1-201ENST00000266088 RTL5Q5HYW3 569 aaPredicted RBP11.55□□□□□ -0.56
SLC5A1-201ENST00000266088 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
SLC5A1-201ENST00000266088 MRC2Q9UBG0 1479 aa11.54□□□□□ -0.56
SLC5A1-201ENST00000266088 CCDC18Q5T9S5 1454 aa11.54□□□□□ -0.56
SLC5A1-201ENST00000266088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.53□□□□□ -0.56
SLC5A1-201ENST00000266088 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
SLC5A1-201ENST00000266088 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.56
SLC5A1-201ENST00000266088 C14orf37Q86TY3 774 aa11.52□□□□□ -0.57
SLC5A1-201ENST00000266088 NESP48681 1621 aa11.52□□□□□ -0.57
SLC5A1-201ENST00000266088 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
SLC5A1-201ENST00000266088 SIN3AQ96ST3 1273 aa11.51□□□□□ -0.57
SLC5A1-201ENST00000266088 DHX57Q6P158 1386 aaKnown RBP11.5□□□□□ -0.57
SLC5A1-201ENST00000266088 FKBP8Q14318 412 aa11.5□□□□□ -0.57
SLC5A1-201ENST00000266088 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
SLC5A1-201ENST00000266088 GRIN2BQ13224 1484 aa11.49□□□□□ -0.57
SLC5A1-201ENST00000266088 MIER1Q8N108 512 aa11.49□□□□□ -0.57
SLC5A1-201ENST00000266088 THOC2Q8NI27 1593 aaKnown RBP11.48□□□□□ -0.57
SLC5A1-201ENST00000266088 ZBTB7CA1YPR0 619 aa11.48□□□□□ -0.57
SLC5A1-201ENST00000266088 CTTNBP2Q8WZ74 1663 aa11.48□□□□□ -0.57
SLC5A1-201ENST00000266088 URB2Q14146 1524 aaKnown RBP11.48□□□□□ -0.57
SLC5A1-201ENST00000266088 MLECQ14165 292 aa11.48□□□□□ -0.57
SLC5A1-201ENST00000266088 DNAJC5BQ9UF47 199 aa11.47□□□□□ -0.57
SLC5A1-201ENST00000266088 RAB3GAP2Q9H2M9 1393 aa11.47□□□□□ -0.57
SLC5A1-201ENST00000266088 CARD11Q9BXL7 1154 aa11.47□□□□□ -0.57
SLC5A1-201ENST00000266088 WDR97A6NE52 1622 aa11.46□□□□□ -0.57
SLC5A1-201ENST00000266088 EHBP1L1Q8N3D4 1523 aa11.45□□□□□ -0.58
SLC5A1-201ENST00000266088 SENP3-EIF4A1A0A087X0R7 540 aa11.45□□□□□ -0.58
SLC5A1-201ENST00000266088 CFAP43Q8NDM7 1665 aa11.45□□□□□ -0.58
SLC5A1-201ENST00000266088 A0A0G2JS52 829 aa11.45□□□□□ -0.58
SLC5A1-201ENST00000266088 PCF11O94913 1555 aaKnown RBP11.44□□□□□ -0.58
SLC5A1-201ENST00000266088 CARMIL2Q6F5E8 1435 aa11.44□□□□□ -0.58
SLC5A1-201ENST00000266088 KIF21AQ7Z4S6 1674 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms