RNA–Protein interactions for RNA: ENST00000265968.7

CSRP3-201, Transcript of cysteine and glycine rich protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP3, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3-201ENST00000265968 ZNF608Q9ULD9 1512 aaPredicted RBP17.33■□□□□ 0.36
CSRP3-201ENST00000265968 EIF4G3O43432 1585 aaKnown RBP17.27■□□□□ 0.36
CSRP3-201ENST00000265968 POLA1P09884 1462 aaPredicted RBP17.25■□□□□ 0.35
CSRP3-201ENST00000265968 TARBP1Q13395 1621 aaKnown RBP17.24■□□□□ 0.35
CSRP3-201ENST00000265968 OSCARQ8IYS5 282 aa17.2■□□□□ 0.34
CSRP3-201ENST00000265968 RAD54L2Q9Y4B4 1467 aa17.19■□□□□ 0.34
CSRP3-201ENST00000265968 CUX1P39880 1505 aa17.19■□□□□ 0.34
CSRP3-201ENST00000265968 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
CSRP3-201ENST00000265968 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
CSRP3-201ENST00000265968 FBLN2P98095 1184 aa17.18■□□□□ 0.34
CSRP3-201ENST00000265968 SOGA1O94964 1423 aa17.15■□□□□ 0.34
CSRP3-201ENST00000265968 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
CSRP3-201ENST00000265968 MKRN4PQ13434 485 aaPredicted RBP17.13■□□□□ 0.33
CSRP3-201ENST00000265968 CHD1O14646 1710 aa17.11■□□□□ 0.33
CSRP3-201ENST00000265968 TDRD9Q8NDG6 1382 aaKnown RBP17.11■□□□□ 0.33
CSRP3-201ENST00000265968 WDR97A6NE52 1622 aa17.06■□□□□ 0.32
CSRP3-201ENST00000265968 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
CSRP3-201ENST00000265968 RIMBP3CA6NJZ7 1639 aa17.03■□□□□ 0.32
CSRP3-201ENST00000265968 RIMBP3BA6NNM3 1639 aa17.03■□□□□ 0.32
CSRP3-201ENST00000265968 RIMBP3Q9UFD9 1639 aa17.03■□□□□ 0.32
CSRP3-201ENST00000265968 RBM42Q9BTD8 480 aaKnown RBP17.02■□□□□ 0.32
CSRP3-201ENST00000265968 PBRM1Q86U86 1689 aa16.99■□□□□ 0.31
CSRP3-201ENST00000265968 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
CSRP3-201ENST00000265968 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
CSRP3-201ENST00000265968 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
CSRP3-201ENST00000265968 BIVM-ERCC5R4GMW8 1640 aa16.97■□□□□ 0.31
CSRP3-201ENST00000265968 WRNQ14191 1432 aaPredicted RBP eCLIP16.97■□□□□ 0.31
CSRP3-201ENST00000265968 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
CSRP3-201ENST00000265968 GAPVD1Q14C86 1478 aa16.96■□□□□ 0.31
CSRP3-201ENST00000265968 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
CSRP3-201ENST00000265968 TOP2BQ02880 1626 aa16.96■□□□□ 0.31
CSRP3-201ENST00000265968 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
CSRP3-201ENST00000265968 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
CSRP3-201ENST00000265968 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
CSRP3-201ENST00000265968 CLASP1Q7Z460 1538 aa16.88■□□□□ 0.29
CSRP3-201ENST00000265968 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
CSRP3-201ENST00000265968 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
CSRP3-201ENST00000265968 SPDYE2Q495Y8 402 aa16.87■□□□□ 0.29
CSRP3-201ENST00000265968 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
CSRP3-201ENST00000265968 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
CSRP3-201ENST00000265968 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
CSRP3-201ENST00000265968 GRIN2AQ12879 1464 aa16.78■□□□□ 0.28
CSRP3-201ENST00000265968 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
CSRP3-201ENST00000265968 ERICH3Q5RHP9 1530 aa16.76■□□□□ 0.27
CSRP3-201ENST00000265968 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
CSRP3-201ENST00000265968 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
CSRP3-201ENST00000265968 ZNF692Q9BU19 519 aaPredicted RBP16.72■□□□□ 0.27
CSRP3-201ENST00000265968 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
CSRP3-201ENST00000265968 NUP160Q12769 1436 aa16.69■□□□□ 0.26
CSRP3-201ENST00000265968 ERCC6L2Q5T890 1561 aa16.66■□□□□ 0.26
CSRP3-201ENST00000265968 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
CSRP3-201ENST00000265968 KIF27Q86VH2 1401 aa16.63■□□□□ 0.25
CSRP3-201ENST00000265968 SHROOM2Q13796 1616 aa16.61■□□□□ 0.25
CSRP3-201ENST00000265968 RUSC2Q8N2Y8 1516 aa16.59■□□□□ 0.25
CSRP3-201ENST00000265968 CUL7Q14999 1698 aa16.58■□□□□ 0.25
CSRP3-201ENST00000265968 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
CSRP3-201ENST00000265968 IGF1RP08069 1367 aa16.56■□□□□ 0.24
CSRP3-201ENST00000265968 PRG4Q92954 1404 aaPredicted RBP16.53■□□□□ 0.24
CSRP3-201ENST00000265968 JPH4Q96JJ6 628 aa16.5■□□□□ 0.23
CSRP3-201ENST00000265968 CARMIL1Q5VZK9 1371 aa16.48■□□□□ 0.23
CSRP3-201ENST00000265968 FKBP8Q14318 412 aa16.46■□□□□ 0.23
CSRP3-201ENST00000265968 KIAA0586Q9BVV6 1533 aa16.46■□□□□ 0.23
CSRP3-201ENST00000265968 PROM2Q8N271 834 aa16.43■□□□□ 0.22
CSRP3-201ENST00000265968 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
CSRP3-201ENST00000265968 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
CSRP3-201ENST00000265968 IQGAP2Q13576 1575 aa16.37■□□□□ 0.21
CSRP3-201ENST00000265968 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
CSRP3-201ENST00000265968 CHRDL2Q6WN34 429 aa16.36■□□□□ 0.21
CSRP3-201ENST00000265968 TTBK1Q5TCY1 1321 aaPredicted RBP16.35■□□□□ 0.21
CSRP3-201ENST00000265968 ADCY10Q96PN6 1610 aa16.35■□□□□ 0.21
CSRP3-201ENST00000265968 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
CSRP3-201ENST00000265968 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
CSRP3-201ENST00000265968 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
CSRP3-201ENST00000265968 PTPRGP23470 1445 aa16.28■□□□□ 0.2
CSRP3-201ENST00000265968 CTTNBP2Q8WZ74 1663 aa16.28■□□□□ 0.2
CSRP3-201ENST00000265968 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.19
CSRP3-201ENST00000265968 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
CSRP3-201ENST00000265968 MAPKBP1O60336 1514 aa16.26■□□□□ 0.19
CSRP3-201ENST00000265968 DISP1Q96F81 1524 aa16.26■□□□□ 0.19
CSRP3-201ENST00000265968 UGGT2Q9NYU1 1516 aa16.24■□□□□ 0.19
CSRP3-201ENST00000265968 STAG3Q9UJ98 1225 aa16.23■□□□□ 0.19
CSRP3-201ENST00000265968 KIAA0556O60303 1618 aa16.23■□□□□ 0.19
CSRP3-201ENST00000265968 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
CSRP3-201ENST00000265968 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
CSRP3-201ENST00000265968 DIP2BQ9P265 1576 aa16.22■□□□□ 0.19
CSRP3-201ENST00000265968 FAM69CQ0P6D2 419 aa16.2■□□□□ 0.18
CSRP3-201ENST00000265968 ABCC2Q92887 1545 aa16.18■□□□□ 0.18
CSRP3-201ENST00000265968 UACAQ9BZF9 1416 aa16.17■□□□□ 0.18
CSRP3-201ENST00000265968 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
CSRP3-201ENST00000265968 UHRF1BP1LA0JNW5 1464 aa16.15■□□□□ 0.18
CSRP3-201ENST00000265968 TSPOAP1O95153 1857 aa16.13■□□□□ 0.17
CSRP3-201ENST00000265968 GOLGA3Q08378 1498 aa16.13■□□□□ 0.17
CSRP3-201ENST00000265968 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
CSRP3-201ENST00000265968 FAM9AQ8IZU1 332 aaPredicted RBP16.12■□□□□ 0.17
CSRP3-201ENST00000265968 ASXL2Q76L83 1435 aa16.12■□□□□ 0.17
CSRP3-201ENST00000265968 ZCCHC11Q5TAX3 1644 aaKnown RBP16.11■□□□□ 0.17
CSRP3-201ENST00000265968 PIP4P2Q8N4L2 257 aa16.11■□□□□ 0.17
CSRP3-201ENST00000265968 EEA1Q15075 1411 aa16.1■□□□□ 0.17
CSRP3-201ENST00000265968 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
CSRP3-201ENST00000265968 KDM5BQ9UGL1 1544 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms