RNA–Protein interactions for RNA: ENST00000265663.12

NSMF-201, Transcript of NMDA receptor synaptonuclear signaling and neuronal migration factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NSMF, Length 2,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMF-201ENST00000265663 IGF1RP08069 1367 aa28.24■■■□□ 2.11
NSMF-201ENST00000265663 FAM50AQ14320 339 aaKnown RBP28.23■■■□□ 2.11
NSMF-201ENST00000265663 ANO8Q9HCE9 1232 aaPredicted RBP28.22■■■□□ 2.11
NSMF-201ENST00000265663 NEFLP07196 543 aa28.21■■■□□ 2.11
NSMF-201ENST00000265663 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
NSMF-201ENST00000265663 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.1
NSMF-201ENST00000265663 CARMIL1Q5VZK9 1371 aa28.19■■■□□ 2.1
NSMF-201ENST00000265663 FGD5Q6ZNL6 1462 aa28.16■■■□□ 2.1
NSMF-201ENST00000265663 DEKP35659 375 aaKnown RBP28.11■■■□□ 2.09
NSMF-201ENST00000265663 RRBP1Q9P2E9 1410 aaKnown RBP28.07■■■□□ 2.08
NSMF-201ENST00000265663 RAD54L2Q9Y4B4 1467 aa28.03■■■□□ 2.08
NSMF-201ENST00000265663 RAB3GAP2Q9H2M9 1393 aa28.02■■■□□ 2.08
NSMF-201ENST00000265663 SIN3AQ96ST3 1273 aa27.99■■■□□ 2.07
NSMF-201ENST00000265663 NESP48681 1621 aa27.97■■■□□ 2.07
NSMF-201ENST00000265663 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
NSMF-201ENST00000265663 CC2D2AQ9P2K1 1620 aa27.97■■■□□ 2.07
NSMF-201ENST00000265663 FANCIQ9NVI1 1328 aa27.96■■■□□ 2.07
NSMF-201ENST00000265663 FHOD3Q2V2M9 1422 aa27.96■■■□□ 2.07
NSMF-201ENST00000265663 PHLDB1Q86UU1 1377 aa27.96■■■□□ 2.07
NSMF-201ENST00000265663 HIRIP3Q9BW71 556 aaPredicted RBP27.94■■■□□ 2.06
NSMF-201ENST00000265663 MYT1LQ9UL68 1186 aa27.91■■■□□ 2.06
NSMF-201ENST00000265663 TRIM52Q96A61 297 aa27.9■■■□□ 2.06
NSMF-201ENST00000265663 SALL2Q9Y467 1007 aaPredicted RBP27.88■■■□□ 2.05
NSMF-201ENST00000265663 TIAM1Q13009 1591 aa27.87■■■□□ 2.05
NSMF-201ENST00000265663 LRRC9Q6ZRR7 1453 aa27.85■■■□□ 2.05
NSMF-201ENST00000265663 CDK11AQ9UQ88 783 aaPredicted RBP27.85■■■□□ 2.05
NSMF-201ENST00000265663 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
NSMF-201ENST00000265663 CCDC136Q96JN2 1154 aa27.82■■■□□ 2.04
NSMF-201ENST00000265663 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
NSMF-201ENST00000265663 SETD5Q9C0A6 1442 aa27.8■■■□□ 2.04
NSMF-201ENST00000265663 TDRD9Q8NDG6 1382 aaKnown RBP27.8■■■□□ 2.04
NSMF-201ENST00000265663 NBR1Q14596 966 aa27.78■■■□□ 2.04
NSMF-201ENST00000265663 DDX10Q13206 875 aaKnown RBP27.78■■■□□ 2.04
NSMF-201ENST00000265663 ARID3CA6NKF2 412 aa27.77■■■□□ 2.04
NSMF-201ENST00000265663 FHAD1B1AJZ9 1412 aa27.77■■■□□ 2.04
NSMF-201ENST00000265663 POLA1P09884 1462 aaPredicted RBP27.77■■■□□ 2.04
NSMF-201ENST00000265663 PCF11O94913 1555 aaKnown RBP27.77■■■□□ 2.04
NSMF-201ENST00000265663 TOPBP1Q92547 1522 aa27.73■■■□□ 2.03
NSMF-201ENST00000265663 IRX6P78412 446 aaPredicted RBP27.72■■■□□ 2.03
NSMF-201ENST00000265663 MAPKBP1O60336 1514 aa27.71■■■□□ 2.03
NSMF-201ENST00000265663 MTUS2Q5JR59 1369 aa27.64■■■□□ 2.02
NSMF-201ENST00000265663 DNMBPQ6XZF7 1577 aa27.63■■■□□ 2.01
NSMF-201ENST00000265663 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
NSMF-201ENST00000265663 RTN4Q9NQC3 1192 aaKnown RBP27.6■■■□□ 2.01
NSMF-201ENST00000265663 WDR97A6NE52 1622 aa27.59■■■□□ 2.01
NSMF-201ENST00000265663 CHIC2Q9UKJ5 165 aa27.58■■■□□ 2.01
NSMF-201ENST00000265663 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.57■■■□□ 2
NSMF-201ENST00000265663 ERICH6BQ5W0A0 696 aa27.57■■■□□ 2
NSMF-201ENST00000265663 MAP3K1Q13233 1512 aa27.55■■■□□ 2
NSMF-201ENST00000265663 IL27Q8NEV9 243 aa27.52■■■□□ 2
NSMF-201ENST00000265663 URB2Q14146 1524 aaKnown RBP27.52■■■□□ 2
NSMF-201ENST00000265663 CASKIN1Q8WXD9 1431 aa27.51■■□□□ 1.99
NSMF-201ENST00000265663 RRP7BPQ9NSQ0 103 aa27.5■■□□□ 1.99
NSMF-201ENST00000265663 NOP58Q9Y2X3 529 aaKnown RBP27.5■■□□□ 1.99
NSMF-201ENST00000265663 FYCO1Q9BQS8 1478 aa27.5■■□□□ 1.99
NSMF-201ENST00000265663 CFAP43Q8NDM7 1665 aa27.48■■□□□ 1.99
NSMF-201ENST00000265663 PAK3O75914 559 aaPredicted RBP27.46■■□□□ 1.99
NSMF-201ENST00000265663 FMN1Q68DA7 1419 aa27.46■■□□□ 1.99
NSMF-201ENST00000265663 FGD6Q6ZV73 1430 aa27.45■■□□□ 1.99
NSMF-201ENST00000265663 TONSLQ96HA7 1378 aa27.44■■□□□ 1.98
NSMF-201ENST00000265663 ANP32CO43423 234 aa27.44■■□□□ 1.98
NSMF-201ENST00000265663 PPP1R15AO75807 674 aaPredicted RBP27.44■■□□□ 1.98
NSMF-201ENST00000265663 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
NSMF-201ENST00000265663 PTPRKQ15262 1439 aa27.41■■□□□ 1.98
NSMF-201ENST00000265663 RTL5Q5HYW3 569 aaPredicted RBP27.4■■□□□ 1.98
NSMF-201ENST00000265663 UBE2Q2Q8WVN8 375 aa27.4■■□□□ 1.98
NSMF-201ENST00000265663 EFCAB5A4FU69 1503 aa27.4■■□□□ 1.98
NSMF-201ENST00000265663 CCER2I3L3R5 266 aa27.37■■□□□ 1.97
NSMF-201ENST00000265663 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
NSMF-201ENST00000265663 CUL7Q14999 1698 aa27.36■■□□□ 1.97
NSMF-201ENST00000265663 CCDC18Q5T9S5 1454 aa27.36■■□□□ 1.97
NSMF-201ENST00000265663 SNAPC4Q5SXM2 1469 aa27.34■■□□□ 1.97
NSMF-201ENST00000265663 HNRNPUQ00839 825 aaKnown RBP eCLIP27.33■■□□□ 1.96
NSMF-201ENST00000265663 NCOA2Q15596 1464 aa27.32■■□□□ 1.96
NSMF-201ENST00000265663 PDS5BQ9NTI5 1447 aa27.31■■□□□ 1.96
NSMF-201ENST00000265663 FOXD1Q16676 465 aa27.3■■□□□ 1.96
NSMF-201ENST00000265663 AQRO60306 1485 aaKnown RBP eCLIP27.28■■□□□ 1.964e-9■■■■■ 45.8
NSMF-201ENST00000265663 B4GALNT3Q6L9W6 998 aa27.28■■□□□ 1.96
NSMF-201ENST00000265663 PPP4R2Q9NY27 417 aa27.27■■□□□ 1.96
NSMF-201ENST00000265663 LAMC3Q9Y6N6 1575 aa27.25■■□□□ 1.95
NSMF-201ENST00000265663 MYOM3Q5VTT5 1437 aa27.24■■□□□ 1.95
NSMF-201ENST00000265663 NAIPQ13075 1403 aa27.2■■□□□ 1.94
NSMF-201ENST00000265663 TIMELESSQ9UNS1 1208 aa27.2■■□□□ 1.94
NSMF-201ENST00000265663 LRRIQ1Q96JM4 1722 aa27.19■■□□□ 1.94
NSMF-201ENST00000265663 KIF21AQ7Z4S6 1674 aa27.18■■□□□ 1.94
NSMF-201ENST00000265663 HFM1A2PYH4 1435 aa27.18■■□□□ 1.94
NSMF-201ENST00000265663 ABCA5Q8WWZ7 1642 aa27.18■■□□□ 1.94
NSMF-201ENST00000265663 UACAQ9BZF9 1416 aa27.17■■□□□ 1.94
NSMF-201ENST00000265663 GRIN2BQ13224 1484 aa27.17■■□□□ 1.94
NSMF-201ENST00000265663 EIF5BO60841 1220 aaKnown RBP27.16■■□□□ 1.94
NSMF-201ENST00000265663 CNGB1Q14028 1251 aaPredicted RBP27.16■■□□□ 1.94
NSMF-201ENST00000265663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.16■■□□□ 1.945e-8■■■■□ 19.6
NSMF-201ENST00000265663 PTPN23Q9H3S7 1636 aa27.14■■□□□ 1.94
NSMF-201ENST00000265663 MAGI3Q5TCQ9 1506 aa27.14■■□□□ 1.94
NSMF-201ENST00000265663 CDK13Q14004 1512 aaKnown RBP27.13■■□□□ 1.93
NSMF-201ENST00000265663 ZBTB47Q9UFB7 747 aaPredicted RBP27.12■■□□□ 1.93
NSMF-201ENST00000265663 SAMD9Q5K651 1589 aa27.11■■□□□ 1.93
NSMF-201ENST00000265663 FBLN2P98095 1184 aa27.11■■□□□ 1.93
NSMF-201ENST00000265663 ANP32AP39687 249 aaKnown RBP27.11■■□□□ 1.93
NSMF-201ENST00000265663 SUPT6HQ7KZ85 1726 aaKnown RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms