RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 FHOD3Q2V2M9 1422 aa17.59■□□□□ 0.41
HERC6-201ENST00000264346 CDK11AQ9UQ88 783 aaPredicted RBP17.57■□□□□ 0.4
HERC6-201ENST00000264346 RAB3GAP2Q9H2M9 1393 aa17.56■□□□□ 0.4
HERC6-201ENST00000264346 IGF1RP08069 1367 aa17.55■□□□□ 0.4
HERC6-201ENST00000264346 NCAPD3P42695 1498 aa17.54■□□□□ 0.4
HERC6-201ENST00000264346 KIF21BO75037 1637 aa17.54■□□□□ 0.4
HERC6-201ENST00000264346 SENP3-EIF4A1A0A087X0R7 540 aa17.54■□□□□ 0.4
HERC6-201ENST00000264346 FKBP8Q14318 412 aa17.54■□□□□ 0.4
HERC6-201ENST00000264346 ERICH6Q7L0X2 663 aa17.53■□□□□ 0.4
HERC6-201ENST00000264346 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
HERC6-201ENST00000264346 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
HERC6-201ENST00000264346 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
HERC6-201ENST00000264346 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
HERC6-201ENST00000264346 FGD5Q6ZNL6 1462 aa17.5■□□□□ 0.39
HERC6-201ENST00000264346 FANCD2Q9BXW9 1451 aa17.5■□□□□ 0.39
HERC6-201ENST00000264346 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
HERC6-201ENST00000264346 FOXD1Q16676 465 aa17.49■□□□□ 0.39
HERC6-201ENST00000264346 ARAP1Q96P48 1450 aa17.49■□□□□ 0.39
HERC6-201ENST00000264346 FAM9BQ8IZU0 186 aa17.48■□□□□ 0.39
HERC6-201ENST00000264346 SLC4A1APQ9BWU0 796 aaKnown RBP17.47■□□□□ 0.39
HERC6-201ENST00000264346 KDM2AQ9Y2K7 1162 aa17.47■□□□□ 0.39
HERC6-201ENST00000264346 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
HERC6-201ENST00000264346 CLSPNQ9HAW4 1339 aa17.45■□□□□ 0.38
HERC6-201ENST00000264346 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
HERC6-201ENST00000264346 CUX1P39880 1505 aa17.45■□□□□ 0.38
HERC6-201ENST00000264346 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
HERC6-201ENST00000264346 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
HERC6-201ENST00000264346 NESP48681 1621 aa17.44■□□□□ 0.38
HERC6-201ENST00000264346 CFTRP13569 1480 aa17.41■□□□□ 0.38
HERC6-201ENST00000264346 ARHGAP35Q9NRY4 1499 aa17.39■□□□□ 0.37
HERC6-201ENST00000264346 ANP32EQ9BTT0 268 aa17.39■□□□□ 0.37
HERC6-201ENST00000264346 CFDP1Q9UEE9 299 aaPredicted RBP17.39■□□□□ 0.37
HERC6-201ENST00000264346 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
HERC6-201ENST00000264346 PRXQ9BXM0 1461 aa17.38■□□□□ 0.37
HERC6-201ENST00000264346 SALL2Q9Y467 1007 aaPredicted RBP17.37■□□□□ 0.37
HERC6-201ENST00000264346 PDS5BQ9NTI5 1447 aa17.36■□□□□ 0.37
HERC6-201ENST00000264346 PHLDB1Q86UU1 1377 aa17.35■□□□□ 0.37
HERC6-201ENST00000264346 EIF4G2P78344 907 aaKnown RBP eCLIP17.35■□□□□ 0.37
HERC6-201ENST00000264346 TSPY4P0CV99 314 aa17.34■□□□□ 0.37
HERC6-201ENST00000264346 TSPY10P0CW01 314 aa17.34■□□□□ 0.37
HERC6-201ENST00000264346 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.37
HERC6-201ENST00000264346 ERCC6Q03468 1493 aa17.32■□□□□ 0.36
HERC6-201ENST00000264346 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
HERC6-201ENST00000264346 MRS2Q9HD23 443 aa17.31■□□□□ 0.36
HERC6-201ENST00000264346 RGL3Q3MIN7 710 aa17.31■□□□□ 0.36
HERC6-201ENST00000264346 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
HERC6-201ENST00000264346 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
HERC6-201ENST00000264346 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
HERC6-201ENST00000264346 TSHZ2Q9NRE2 1034 aa17.27■□□□□ 0.36
HERC6-201ENST00000264346 CC2D2AQ9P2K1 1620 aa17.26■□□□□ 0.35
HERC6-201ENST00000264346 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
HERC6-201ENST00000264346 ERICH3Q5RHP9 1530 aa17.24■□□□□ 0.35
HERC6-201ENST00000264346 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
HERC6-201ENST00000264346 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
HERC6-201ENST00000264346 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
HERC6-201ENST00000264346 MPHOSPH9Q99550 1183 aa17.2■□□□□ 0.34
HERC6-201ENST00000264346 GAPVD1Q14C86 1478 aa17.2■□□□□ 0.34
HERC6-201ENST00000264346 LRRC9Q6ZRR7 1453 aa17.2■□□□□ 0.34
HERC6-201ENST00000264346 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
HERC6-201ENST00000264346 ZNF644Q9H582 1327 aaPredicted RBP17.17■□□□□ 0.34
HERC6-201ENST00000264346 POLA1P09884 1462 aaPredicted RBP17.17■□□□□ 0.34
HERC6-201ENST00000264346 L3MBTL2Q969R5 705 aa17.17■□□□□ 0.34
HERC6-201ENST00000264346 TMC1Q8TDI8 760 aa17.16■□□□□ 0.34
HERC6-201ENST00000264346 RRBP1Q9P2E9 1410 aaKnown RBP17.14■□□□□ 0.33
HERC6-201ENST00000264346 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
HERC6-201ENST00000264346 PKD2Q13563 968 aa17.13■□□□□ 0.33
HERC6-201ENST00000264346 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
HERC6-201ENST00000264346 CARD11Q9BXL7 1154 aa17.11■□□□□ 0.33
HERC6-201ENST00000264346 JPH4Q96JJ6 628 aa17.1■□□□□ 0.33
HERC6-201ENST00000264346 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
HERC6-201ENST00000264346 DCAF11Q8TEB1 546 aa17.09■□□□□ 0.33
HERC6-201ENST00000264346 CCDC18Q5T9S5 1454 aa17.08■□□□□ 0.32
HERC6-201ENST00000264346 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
HERC6-201ENST00000264346 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
HERC6-201ENST00000264346 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
HERC6-201ENST00000264346 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
HERC6-201ENST00000264346 NCOA2Q15596 1464 aa17■□□□□ 0.31
HERC6-201ENST00000264346 NUP155O75694 1391 aa16.99■□□□□ 0.31
HERC6-201ENST00000264346 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
HERC6-201ENST00000264346 RBM19Q9Y4C8 960 aaKnown RBP16.98■□□□□ 0.31
HERC6-201ENST00000264346 CCER2I3L3R5 266 aa16.98■□□□□ 0.31
HERC6-201ENST00000264346 NPM2Q86SE8 214 aaKnown RBP16.97■□□□□ 0.31
HERC6-201ENST00000264346 PCF11O94913 1555 aaKnown RBP16.95■□□□□ 0.3
HERC6-201ENST00000264346 DNMBPQ6XZF7 1577 aa16.95■□□□□ 0.3
HERC6-201ENST00000264346 NPM1P06748 294 aaKnown RBP eCLIP16.95■□□□□ 0.3
HERC6-201ENST00000264346 CCDC136Q96JN2 1154 aa16.95■□□□□ 0.3
HERC6-201ENST00000264346 CARMIL2Q6F5E8 1435 aa16.95■□□□□ 0.3
HERC6-201ENST00000264346 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
HERC6-201ENST00000264346 FYCO1Q9BQS8 1478 aa16.94■□□□□ 0.3
HERC6-201ENST00000264346 NBR1Q14596 966 aa16.94■□□□□ 0.3
HERC6-201ENST00000264346 CC2D1BQ5T0F9 858 aaKnown RBP16.93■□□□□ 0.3
HERC6-201ENST00000264346 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
HERC6-201ENST00000264346 WDR97A6NE52 1622 aa16.92■□□□□ 0.3
HERC6-201ENST00000264346 URB2Q14146 1524 aaKnown RBP16.91■□□□□ 0.3
HERC6-201ENST00000264346 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
HERC6-201ENST00000264346 DAXXQ9UER7 740 aaPredicted RBP16.89■□□□□ 0.3
HERC6-201ENST00000264346 PRDM2Q13029 1718 aa16.89■□□□□ 0.29
HERC6-201ENST00000264346 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
HERC6-201ENST00000264346 ANKRD30AQ9BXX3 1397 aa16.87■□□□□ 0.29
HERC6-201ENST00000264346 CDK13Q14004 1512 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms