RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 CFTRP13569 1480 aa18.52■□□□□ 0.55
SEC23B-201ENST00000262544 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
SEC23B-201ENST00000262544 CLSPNQ9HAW4 1339 aa18.49■□□□□ 0.55
SEC23B-201ENST00000262544 ERICH3Q5RHP9 1530 aa18.49■□□□□ 0.55
SEC23B-201ENST00000262544 PHLDB1Q86UU1 1377 aa18.49■□□□□ 0.55
SEC23B-201ENST00000262544 FHOD3Q2V2M9 1422 aa18.47■□□□□ 0.55
SEC23B-201ENST00000262544 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
SEC23B-201ENST00000262544 RRBP1Q9P2E9 1410 aaKnown RBP18.46■□□□□ 0.55
SEC23B-201ENST00000262544 CHIC2Q9UKJ5 165 aa18.46■□□□□ 0.55
SEC23B-201ENST00000262544 FKBP8Q14318 412 aa18.44■□□□□ 0.54
SEC23B-201ENST00000262544 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
SEC23B-201ENST00000262544 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
SEC23B-201ENST00000262544 CADPSQ9ULU8 1353 aa18.41■□□□□ 0.54
SEC23B-201ENST00000262544 SETD5Q9C0A6 1442 aa18.4■□□□□ 0.54
SEC23B-201ENST00000262544 RRP7BPQ9NSQ0 103 aa18.36■□□□□ 0.53
SEC23B-201ENST00000262544 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
SEC23B-201ENST00000262544 ANP32CO43423 234 aa18.33■□□□□ 0.52
SEC23B-201ENST00000262544 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
SEC23B-201ENST00000262544 LRRC9Q6ZRR7 1453 aa18.32■□□□□ 0.52
SEC23B-201ENST00000262544 IRX6P78412 446 aaPredicted RBP18.32■□□□□ 0.52
SEC23B-201ENST00000262544 NESP48681 1621 aa18.32■□□□□ 0.52
SEC23B-201ENST00000262544 MTUS2Q5JR59 1369 aa18.32■□□□□ 0.52
SEC23B-201ENST00000262544 WDR97A6NE52 1622 aa18.31■□□□□ 0.52
SEC23B-201ENST00000262544 TONSLQ96HA7 1378 aa18.31■□□□□ 0.52
SEC23B-201ENST00000262544 NEFLP07196 543 aa18.29■□□□□ 0.52
SEC23B-201ENST00000262544 MAPKBP1O60336 1514 aa18.28■□□□□ 0.52
SEC23B-201ENST00000262544 TIAM1Q13009 1591 aa18.28■□□□□ 0.52
SEC23B-201ENST00000262544 FOXD1Q16676 465 aa18.28■□□□□ 0.52
SEC23B-201ENST00000262544 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.52
SEC23B-201ENST00000262544 SENP3-EIF4A1A0A087X0R7 540 aa18.27■□□□□ 0.51
SEC23B-201ENST00000262544 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
SEC23B-201ENST00000262544 FHAD1B1AJZ9 1412 aa18.25■□□□□ 0.51
SEC23B-201ENST00000262544 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
SEC23B-201ENST00000262544 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
SEC23B-201ENST00000262544 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
SEC23B-201ENST00000262544 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
SEC23B-201ENST00000262544 HNRNPUQ00839 825 aaKnown RBP eCLIP18.2■□□□□ 0.5
SEC23B-201ENST00000262544 ZNF326Q5BKZ1 582 aaKnown RBP18.15■□□□□ 0.5
SEC23B-201ENST00000262544 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
SEC23B-201ENST00000262544 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
SEC23B-201ENST00000262544 ANP32EQ9BTT0 268 aa18.1■□□□□ 0.49
SEC23B-201ENST00000262544 PTPRKQ15262 1439 aa18.09■□□□□ 0.49
SEC23B-201ENST00000262544 FGD6Q6ZV73 1430 aa18.09■□□□□ 0.49
SEC23B-201ENST00000262544 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.49
SEC23B-201ENST00000262544 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.49
SEC23B-201ENST00000262544 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
SEC23B-201ENST00000262544 ZNF777Q9ULD5 760 aaPredicted RBP18.07■□□□□ 0.48
SEC23B-201ENST00000262544 FBLN2P98095 1184 aa18.06■□□□□ 0.48
SEC23B-201ENST00000262544 HSPA5P11021 654 aaKnown RBP18.05■□□□□ 0.48
SEC23B-201ENST00000262544 CASKIN1Q8WXD9 1431 aa18.04■□□□□ 0.48
SEC23B-201ENST00000262544 FMN1Q68DA7 1419 aa18.03■□□□□ 0.48
SEC23B-201ENST00000262544 CCDC184Q52MB2 194 aa18.02■□□□□ 0.48
SEC23B-201ENST00000262544 BCL11AQ9H165 835 aa18.02■□□□□ 0.48
SEC23B-201ENST00000262544 AQRO60306 1485 aaKnown RBP eCLIP18.01■□□□□ 0.47
SEC23B-201ENST00000262544 FYCO1Q9BQS8 1478 aa18■□□□□ 0.47
SEC23B-201ENST00000262544 ZNF644Q9H582 1327 aaPredicted RBP17.99■□□□□ 0.47
SEC23B-201ENST00000262544 L3MBTL2Q969R5 705 aa17.99■□□□□ 0.47
SEC23B-201ENST00000262544 NCOA2Q15596 1464 aa17.98■□□□□ 0.47
SEC23B-201ENST00000262544 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
SEC23B-201ENST00000262544 TIMELESSQ9UNS1 1208 aa17.97■□□□□ 0.47
SEC23B-201ENST00000262544 ABCA10Q8WWZ4 1543 aa17.97■□□□□ 0.47
SEC23B-201ENST00000262544 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
SEC23B-201ENST00000262544 RBM19Q9Y4C8 960 aaKnown RBP17.96■□□□□ 0.47
SEC23B-201ENST00000262544 MPHOSPH9Q99550 1183 aa17.96■□□□□ 0.47
SEC23B-201ENST00000262544 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.47
SEC23B-201ENST00000262544 MAP3K1Q13233 1512 aa17.96■□□□□ 0.46
SEC23B-201ENST00000262544 CCER2I3L3R5 266 aa17.95■□□□□ 0.46
SEC23B-201ENST00000262544 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
SEC23B-201ENST00000262544 SLC4A1APQ9BWU0 796 aaKnown RBP17.95■□□□□ 0.46
SEC23B-201ENST00000262544 MRS2Q9HD23 443 aa17.94■□□□□ 0.46
SEC23B-201ENST00000262544 NAIPQ13075 1403 aa17.94■□□□□ 0.46
SEC23B-201ENST00000262544 KIF21AQ7Z4S6 1674 aa17.93■□□□□ 0.46
SEC23B-201ENST00000262544 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
SEC23B-201ENST00000262544 C11orf95C9JLR9 678 aaPredicted RBP17.93■□□□□ 0.46
SEC23B-201ENST00000262544 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
SEC23B-201ENST00000262544 UACAQ9BZF9 1416 aa17.93■□□□□ 0.46
SEC23B-201ENST00000262544 CFAP43Q8NDM7 1665 aa17.9■□□□□ 0.46
SEC23B-201ENST00000262544 HFM1A2PYH4 1435 aa17.9■□□□□ 0.46
SEC23B-201ENST00000262544 SNAPC4Q5SXM2 1469 aa17.87■□□□□ 0.45
SEC23B-201ENST00000262544 CDK13Q14004 1512 aaKnown RBP17.86■□□□□ 0.45
SEC23B-201ENST00000262544 B4GALNT3Q6L9W6 998 aa17.86■□□□□ 0.45
SEC23B-201ENST00000262544 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
SEC23B-201ENST00000262544 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
SEC23B-201ENST00000262544 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
SEC23B-201ENST00000262544 SALL2Q9Y467 1007 aaPredicted RBP17.85■□□□□ 0.45
SEC23B-201ENST00000262544 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.45
SEC23B-201ENST00000262544 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
SEC23B-201ENST00000262544 ERICH6Q7L0X2 663 aa17.81■□□□□ 0.44
SEC23B-201ENST00000262544 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
SEC23B-201ENST00000262544 MAGI3Q5TCQ9 1506 aa17.79■□□□□ 0.44
SEC23B-201ENST00000262544 CUL7Q14999 1698 aa17.79■□□□□ 0.44
SEC23B-201ENST00000262544 CTTNBP2Q8WZ74 1663 aa17.78■□□□□ 0.44
SEC23B-201ENST00000262544 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
SEC23B-201ENST00000262544 TARBP1Q13395 1621 aaKnown RBP17.78■□□□□ 0.44
SEC23B-201ENST00000262544 PRKRIP1Q9H875 184 aaPredicted RBP17.77■□□□□ 0.44
SEC23B-201ENST00000262544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.77■□□□□ 0.44
SEC23B-201ENST00000262544 MRC2Q9UBG0 1479 aa17.77■□□□□ 0.44
SEC23B-201ENST00000262544 GRIN2BQ13224 1484 aa17.76■□□□□ 0.43
SEC23B-201ENST00000262544 KDM6BO15054 1643 aa17.75■□□□□ 0.43
SEC23B-201ENST00000262544 CHMP7Q8WUX9 453 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms