RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 LRRC9Q6ZRR7 1453 aa27.88■■■□□ 2.05
SCARB1-201ENST00000261693 KCNH8Q96L42 1107 aa27.87■■■□□ 2.05
SCARB1-201ENST00000261693 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
SCARB1-201ENST00000261693 SETD5Q9C0A6 1442 aa27.86■■■□□ 2.05
SCARB1-201ENST00000261693 MAP3K1Q13233 1512 aa27.84■■■□□ 2.05
SCARB1-201ENST00000261693 SIN3AQ96ST3 1273 aa27.83■■■□□ 2.05
SCARB1-201ENST00000261693 MYT1Q01538 1121 aa27.81■■■□□ 2.04
SCARB1-201ENST00000261693 PCF11O94913 1555 aaKnown RBP27.75■■■□□ 2.03
SCARB1-201ENST00000261693 FHAD1B1AJZ9 1412 aa27.75■■■□□ 2.03
SCARB1-201ENST00000261693 WDR97A6NE52 1622 aa27.75■■■□□ 2.03
SCARB1-201ENST00000261693 DDX10Q13206 875 aaKnown RBP27.72■■■□□ 2.03
SCARB1-201ENST00000261693 FHOD3Q2V2M9 1422 aa27.7■■■□□ 2.03
SCARB1-201ENST00000261693 CFAP43Q8NDM7 1665 aa27.7■■■□□ 2.02
SCARB1-201ENST00000261693 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
SCARB1-201ENST00000261693 RAD54L2Q9Y4B4 1467 aa27.65■■■□□ 2.02
SCARB1-201ENST00000261693 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
SCARB1-201ENST00000261693 FYCO1Q9BQS8 1478 aa27.55■■■□□ 2
SCARB1-201ENST00000261693 CC2D2AQ9P2K1 1620 aa27.54■■■□□ 2
SCARB1-201ENST00000261693 PPP1R15AO75807 674 aaPredicted RBP27.53■■■□□ 2
SCARB1-201ENST00000261693 CASKIN1Q8WXD9 1431 aa27.52■■■□□ 2
SCARB1-201ENST00000261693 BCANQ96GW7 911 aa27.52■■■□□ 2
SCARB1-201ENST00000261693 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
SCARB1-201ENST00000261693 TSHZ2Q9NRE2 1034 aa27.51■■□□□ 1.99
SCARB1-201ENST00000261693 ABCA10Q8WWZ4 1543 aa27.5■■□□□ 1.99
SCARB1-201ENST00000261693 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
SCARB1-201ENST00000261693 TIMELESSQ9UNS1 1208 aa27.49■■□□□ 1.99
SCARB1-201ENST00000261693 EFCAB5A4FU69 1503 aa27.48■■□□□ 1.99
SCARB1-201ENST00000261693 TOPBP1Q92547 1522 aa27.48■■□□□ 1.99
SCARB1-201ENST00000261693 NESP48681 1621 aa27.45■■□□□ 1.98
SCARB1-201ENST00000261693 CTTNBP2Q8WZ74 1663 aa27.44■■□□□ 1.98
SCARB1-201ENST00000261693 FGD6Q6ZV73 1430 aa27.43■■□□□ 1.98
SCARB1-201ENST00000261693 AQRO60306 1485 aaKnown RBP eCLIP27.42■■□□□ 1.987e-7■■■■■ 33.9
SCARB1-201ENST00000261693 FKBP8Q14318 412 aa27.42■■□□□ 1.98
SCARB1-201ENST00000261693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.42■■□□□ 1.983e-11■■■□□ 17
SCARB1-201ENST00000261693 CUL7Q14999 1698 aa27.4■■□□□ 1.98
SCARB1-201ENST00000261693 MTUS2Q5JR59 1369 aa27.39■■□□□ 1.98
SCARB1-201ENST00000261693 TRIM52Q96A61 297 aa27.39■■□□□ 1.98
SCARB1-201ENST00000261693 TONSLQ96HA7 1378 aa27.38■■□□□ 1.97
SCARB1-201ENST00000261693 FMN1Q68DA7 1419 aa27.38■■□□□ 1.97
SCARB1-201ENST00000261693 ANP32CO43423 234 aa27.37■■□□□ 1.97
SCARB1-201ENST00000261693 CCDC18Q5T9S5 1454 aa27.37■■□□□ 1.97
SCARB1-201ENST00000261693 PTPRKQ15262 1439 aa27.37■■□□□ 1.97
SCARB1-201ENST00000261693 SNAPC4Q5SXM2 1469 aa27.35■■□□□ 1.97
SCARB1-201ENST00000261693 TDRD9Q8NDG6 1382 aaKnown RBP27.3■■□□□ 1.96
SCARB1-201ENST00000261693 CCER2I3L3R5 266 aa27.3■■□□□ 1.96
SCARB1-201ENST00000261693 LRRIQ1Q96JM4 1722 aa27.29■■□□□ 1.96
SCARB1-201ENST00000261693 HFM1A2PYH4 1435 aa27.29■■□□□ 1.96
SCARB1-201ENST00000261693 PTPN23Q9H3S7 1636 aa27.27■■□□□ 1.96
SCARB1-201ENST00000261693 UACAQ9BZF9 1416 aa27.27■■□□□ 1.96
SCARB1-201ENST00000261693 NCOA2Q15596 1464 aa27.25■■□□□ 1.95
SCARB1-201ENST00000261693 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
SCARB1-201ENST00000261693 NEFLP07196 543 aa27.22■■□□□ 1.95
SCARB1-201ENST00000261693 NAIPQ13075 1403 aa27.22■■□□□ 1.95
SCARB1-201ENST00000261693 MYOM3Q5VTT5 1437 aa27.21■■□□□ 1.95
SCARB1-201ENST00000261693 SAMD9Q5K651 1589 aa27.2■■□□□ 1.94
SCARB1-201ENST00000261693 GRIN2BQ13224 1484 aa27.18■■□□□ 1.94
SCARB1-201ENST00000261693 RRP7BPQ9NSQ0 103 aa27.17■■□□□ 1.94
SCARB1-201ENST00000261693 CHIC2Q9UKJ5 165 aa27.17■■□□□ 1.94
SCARB1-201ENST00000261693 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
SCARB1-201ENST00000261693 SUPT6HQ7KZ85 1726 aaKnown RBP27.15■■□□□ 1.94
SCARB1-201ENST00000261693 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
SCARB1-201ENST00000261693 EHBP1L1Q8N3D4 1523 aa27.09■■□□□ 1.93
SCARB1-201ENST00000261693 KDM5BQ9UGL1 1544 aa27.09■■□□□ 1.93
SCARB1-201ENST00000261693 MAGI3Q5TCQ9 1506 aa27.08■■□□□ 1.93
SCARB1-201ENST00000261693 ANP32EQ9BTT0 268 aa27.05■■□□□ 1.92
SCARB1-201ENST00000261693 UGGT2Q9NYU1 1516 aa27.05■■□□□ 1.92
SCARB1-201ENST00000261693 LAMC3Q9Y6N6 1575 aa27.04■■□□□ 1.92
SCARB1-201ENST00000261693 THOC2Q8NI27 1593 aaKnown RBP27.04■■□□□ 1.92
SCARB1-201ENST00000261693 ARID3CA6NKF2 412 aa27.03■■□□□ 1.92
SCARB1-201ENST00000261693 HSPA5P11021 654 aaKnown RBP27.02■■□□□ 1.92
SCARB1-201ENST00000261693 HNRNPUQ00839 825 aaKnown RBP eCLIP27.02■■□□□ 1.922e-6■□□□□ 11
SCARB1-201ENST00000261693 WASHC2AQ641Q2 1341 aa27■■□□□ 1.91
SCARB1-201ENST00000261693 ARHGEF11O15085 1522 aa26.98■■□□□ 1.91
SCARB1-201ENST00000261693 RBM19Q9Y4C8 960 aaKnown RBP26.97■■□□□ 1.91
SCARB1-201ENST00000261693 DENND4BO75064 1496 aaPredicted RBP26.97■■□□□ 1.91
SCARB1-201ENST00000261693 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
SCARB1-201ENST00000261693 KDM6BO15054 1643 aa26.97■■□□□ 1.91
SCARB1-201ENST00000261693 FOXD1Q16676 465 aa26.96■■□□□ 1.91
SCARB1-201ENST00000261693 IRX6P78412 446 aaPredicted RBP26.93■■□□□ 1.9
SCARB1-201ENST00000261693 GCC2Q8IWJ2 1684 aa26.92■■□□□ 1.9
SCARB1-201ENST00000261693 PDS5BQ9NTI5 1447 aa26.92■■□□□ 1.9
SCARB1-201ENST00000261693 TCOF1Q13428 1488 aaKnown RBP26.91■■□□□ 1.9
SCARB1-201ENST00000261693 MPHOSPH9Q99550 1183 aa26.91■■□□□ 1.9
SCARB1-201ENST00000261693 KIF21AQ7Z4S6 1674 aa26.91■■□□□ 1.9
SCARB1-201ENST00000261693 EIF4G2P78344 907 aaKnown RBP eCLIP26.9■■□□□ 1.92e-9■■■■□ 23.9
SCARB1-201ENST00000261693 HECW1Q76N89 1606 aa26.9■■□□□ 1.9
SCARB1-201ENST00000261693 CDK13Q14004 1512 aaKnown RBP26.9■■□□□ 1.9
SCARB1-201ENST00000261693 EPRSP07814 1512 aaKnown RBP26.88■■□□□ 1.89
SCARB1-201ENST00000261693 L3MBTL2Q969R5 705 aa26.88■■□□□ 1.89
SCARB1-201ENST00000261693 TARBP1Q13395 1621 aaKnown RBP26.86■■□□□ 1.89
SCARB1-201ENST00000261693 CCDC184Q52MB2 194 aa26.85■■□□□ 1.89
SCARB1-201ENST00000261693 C11orf95C9JLR9 678 aaPredicted RBP26.83■■□□□ 1.89
SCARB1-201ENST00000261693 IQGAP2Q13576 1575 aa26.82■■□□□ 1.88
SCARB1-201ENST00000261693 PBRM1Q86U86 1689 aa26.79■■□□□ 1.88
SCARB1-201ENST00000261693 AKNAQ7Z591 1439 aa26.79■■□□□ 1.88
SCARB1-201ENST00000261693 CNTLNQ9NXG0 1405 aa26.78■■□□□ 1.88
SCARB1-201ENST00000261693 MIA2Q96PC5 1412 aa26.77■■□□□ 1.88
SCARB1-201ENST00000261693 FAM9BQ8IZU0 186 aa26.74■■□□□ 1.87
SCARB1-201ENST00000261693 WDR62O43379 1518 aa26.74■■□□□ 1.87
SCARB1-201ENST00000261693 NBPF8Q3BBV2 869 aa26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms