RNA–Protein interactions for RNA: ENST00000257915.9

TFCP2-201, Transcript of transcription factor CP2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFCP2, Length 3,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2-201ENST00000257915 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
TFCP2-201ENST00000257915 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
TFCP2-201ENST00000257915 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
TFCP2-201ENST00000257915 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
TFCP2-201ENST00000257915 P3H3Q8IVL6 736 aa20.68■□□□□ 0.9
TFCP2-201ENST00000257915 ATP1B4Q9UN42 357 aaPredicted RBP20.67■□□□□ 0.9
TFCP2-201ENST00000257915 LRRC9Q6ZRR7 1453 aa20.66■□□□□ 0.9
TFCP2-201ENST00000257915 IGF1RP08069 1367 aa20.66■□□□□ 0.9
TFCP2-201ENST00000257915 CFTRP13569 1480 aa20.62■□□□□ 0.89
TFCP2-201ENST00000257915 RBM19Q9Y4C8 960 aaKnown RBP20.61■□□□□ 0.89
TFCP2-201ENST00000257915 NCAPD3P42695 1498 aa20.6■□□□□ 0.89
TFCP2-201ENST00000257915 NEFLP07196 543 aa20.6■□□□□ 0.89
TFCP2-201ENST00000257915 HMGXB3Q12766 1538 aa20.59■□□□□ 0.89
TFCP2-201ENST00000257915 MAP3K1Q13233 1512 aa20.58■□□□□ 0.88
TFCP2-201ENST00000257915 ANP32CO43423 234 aa20.58■□□□□ 0.88
TFCP2-201ENST00000257915 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
TFCP2-201ENST00000257915 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
TFCP2-201ENST00000257915 PCF11O94913 1555 aaKnown RBP20.52■□□□□ 0.88
TFCP2-201ENST00000257915 TIMELESSQ9UNS1 1208 aa20.49■□□□□ 0.87
TFCP2-201ENST00000257915 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
TFCP2-201ENST00000257915 BCL11AQ9H165 835 aa20.47■□□□□ 0.87
TFCP2-201ENST00000257915 FHAD1B1AJZ9 1412 aa20.47■□□□□ 0.87
TFCP2-201ENST00000257915 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
TFCP2-201ENST00000257915 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
TFCP2-201ENST00000257915 IRX6P78412 446 aaPredicted RBP20.44■□□□□ 0.86
TFCP2-201ENST00000257915 TONSLQ96HA7 1378 aa20.43■□□□□ 0.86
TFCP2-201ENST00000257915 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
TFCP2-201ENST00000257915 MSH5O43196 834 aa20.41■□□□□ 0.86
TFCP2-201ENST00000257915 HNRNPUQ00839 825 aaKnown RBP eCLIP20.38■□□□□ 0.85
TFCP2-201ENST00000257915 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
TFCP2-201ENST00000257915 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
TFCP2-201ENST00000257915 CADPSQ9ULU8 1353 aa20.33■□□□□ 0.84
TFCP2-201ENST00000257915 FGD6Q6ZV73 1430 aa20.32■□□□□ 0.84
TFCP2-201ENST00000257915 FYCO1Q9BQS8 1478 aa20.32■□□□□ 0.84
TFCP2-201ENST00000257915 CASKIN1Q8WXD9 1431 aa20.3■□□□□ 0.84
TFCP2-201ENST00000257915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.848e-9■■■□□ 17.4
TFCP2-201ENST00000257915 RAD54L2Q9Y4B4 1467 aa20.29■□□□□ 0.84
TFCP2-201ENST00000257915 AQRO60306 1485 aaKnown RBP eCLIP20.27■□□□□ 0.84
TFCP2-201ENST00000257915 UACAQ9BZF9 1416 aa20.27■□□□□ 0.84
TFCP2-201ENST00000257915 PTPN23Q9H3S7 1636 aa20.26■□□□□ 0.83
TFCP2-201ENST00000257915 MTUS2Q5JR59 1369 aa20.25■□□□□ 0.83
TFCP2-201ENST00000257915 HFM1A2PYH4 1435 aa20.25■□□□□ 0.83
TFCP2-201ENST00000257915 CCDC184Q52MB2 194 aa20.24■□□□□ 0.83
TFCP2-201ENST00000257915 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
TFCP2-201ENST00000257915 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
TFCP2-201ENST00000257915 KDM5BQ9UGL1 1544 aa20.23■□□□□ 0.83
TFCP2-201ENST00000257915 NAIPQ13075 1403 aa20.22■□□□□ 0.83
TFCP2-201ENST00000257915 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
TFCP2-201ENST00000257915 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
TFCP2-201ENST00000257915 LRRIQ1Q96JM4 1722 aa20.2■□□□□ 0.82
TFCP2-201ENST00000257915 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
TFCP2-201ENST00000257915 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
TFCP2-201ENST00000257915 SNAPC4Q5SXM2 1469 aa20.18■□□□□ 0.82
TFCP2-201ENST00000257915 CTTNBP2Q8WZ74 1663 aa20.18■□□□□ 0.82
TFCP2-201ENST00000257915 FANCD2Q9BXW9 1451 aa20.17■□□□□ 0.82
TFCP2-201ENST00000257915 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
TFCP2-201ENST00000257915 FMN1Q68DA7 1419 aa20.16■□□□□ 0.82
TFCP2-201ENST00000257915 NCOA2Q15596 1464 aa20.15■□□□□ 0.82
TFCP2-201ENST00000257915 FAM9BQ8IZU0 186 aa20.14■□□□□ 0.81
TFCP2-201ENST00000257915 POLA1P09884 1462 aaPredicted RBP20.13■□□□□ 0.81
TFCP2-201ENST00000257915 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
TFCP2-201ENST00000257915 C11orf95C9JLR9 678 aaPredicted RBP20.13■□□□□ 0.81
TFCP2-201ENST00000257915 MYOM3Q5VTT5 1437 aa20.12■□□□□ 0.81
TFCP2-201ENST00000257915 ERICH6Q7L0X2 663 aa20.12■□□□□ 0.81
TFCP2-201ENST00000257915 FOXD1Q16676 465 aa20.1■□□□□ 0.81
TFCP2-201ENST00000257915 B4GALNT3Q6L9W6 998 aa20.1■□□□□ 0.81
TFCP2-201ENST00000257915 EIF4G2P78344 907 aaKnown RBP eCLIP20.1■□□□□ 0.81
TFCP2-201ENST00000257915 DENND4BO75064 1496 aaPredicted RBP20.09■□□□□ 0.81
TFCP2-201ENST00000257915 PPP4R2Q9NY27 417 aa20.09■□□□□ 0.81
TFCP2-201ENST00000257915 TOPBP1Q92547 1522 aa20.08■□□□□ 0.8
TFCP2-201ENST00000257915 CC2D2AQ9P2K1 1620 aa20.07■□□□□ 0.8
TFCP2-201ENST00000257915 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
TFCP2-201ENST00000257915 CUL7Q14999 1698 aa20.07■□□□□ 0.8
TFCP2-201ENST00000257915 KDM6BO15054 1643 aa20.06■□□□□ 0.8
TFCP2-201ENST00000257915 SUPT6HQ7KZ85 1726 aaKnown RBP20.05■□□□□ 0.8
TFCP2-201ENST00000257915 L3MBTL2Q969R5 705 aa20.05■□□□□ 0.8
TFCP2-201ENST00000257915 PRKRIP1Q9H875 184 aaPredicted RBP20.05■□□□□ 0.8
TFCP2-201ENST00000257915 CNTLNQ9NXG0 1405 aa20.05■□□□□ 0.8
TFCP2-201ENST00000257915 MRS2Q9HD23 443 aa20.04■□□□□ 0.8
TFCP2-201ENST00000257915 GRIN2BQ13224 1484 aa20.03■□□□□ 0.8
TFCP2-201ENST00000257915 NESP48681 1621 aa20.03■□□□□ 0.8
TFCP2-201ENST00000257915 MAGI3Q5TCQ9 1506 aa20.02■□□□□ 0.8
TFCP2-201ENST00000257915 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
TFCP2-201ENST00000257915 CNGB1Q14028 1251 aaPredicted RBP20.01■□□□□ 0.79
TFCP2-201ENST00000257915 MPHOSPH9Q99550 1183 aa20.01■□□□□ 0.79
TFCP2-201ENST00000257915 SAMD9Q5K651 1589 aa20■□□□□ 0.79
TFCP2-201ENST00000257915 ARID3CA6NKF2 412 aa19.99■□□□□ 0.79
TFCP2-201ENST00000257915 ERICH6BQ5W0A0 696 aa19.99■□□□□ 0.79
TFCP2-201ENST00000257915 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
TFCP2-201ENST00000257915 UGGT2Q9NYU1 1516 aa19.98■□□□□ 0.79
TFCP2-201ENST00000257915 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
TFCP2-201ENST00000257915 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
TFCP2-201ENST00000257915 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
TFCP2-201ENST00000257915 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
TFCP2-201ENST00000257915 ZBED9Q6R2W3 1325 aa19.95■□□□□ 0.78
TFCP2-201ENST00000257915 GCC2Q8IWJ2 1684 aa19.95■□□□□ 0.78
TFCP2-201ENST00000257915 NCOA1Q15788 1441 aa19.95■□□□□ 0.78
TFCP2-201ENST00000257915 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
TFCP2-201ENST00000257915 KIF7Q2M1P5 1343 aa19.91■□□□□ 0.78
TFCP2-201ENST00000257915 TCOF1Q13428 1488 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms