RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 HMGXB3Q12766 1538 aa19.18■□□□□ 0.66
H3F3B-201ENST00000254810 IGF1RP08069 1367 aa19.18■□□□□ 0.66
H3F3B-201ENST00000254810 HIRIP3Q9BW71 556 aaPredicted RBP19.18■□□□□ 0.66
H3F3B-201ENST00000254810 FKBP8Q14318 412 aa19.17■□□□□ 0.66
H3F3B-201ENST00000254810 LRRC9Q6ZRR7 1453 aa19.16■□□□□ 0.66
H3F3B-201ENST00000254810 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
H3F3B-201ENST00000254810 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
H3F3B-201ENST00000254810 FAM50AQ14320 339 aaKnown RBP19.14■□□□□ 0.65
H3F3B-201ENST00000254810 MAP3K1Q13233 1512 aa19.13■□□□□ 0.65
H3F3B-201ENST00000254810 P3H3Q8IVL6 736 aa19.09■□□□□ 0.65
H3F3B-201ENST00000254810 CARMIL1Q5VZK9 1371 aa19.07■□□□□ 0.64
H3F3B-201ENST00000254810 TRIM52Q96A61 297 aa19.07■□□□□ 0.64
H3F3B-201ENST00000254810 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
H3F3B-201ENST00000254810 CFAP43Q8NDM7 1665 aa19.03■□□□□ 0.64
H3F3B-201ENST00000254810 ATP1B4Q9UN42 357 aaPredicted RBP19.02■□□□□ 0.63
H3F3B-201ENST00000254810 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
H3F3B-201ENST00000254810 FHOD3Q2V2M9 1422 aa18.98■□□□□ 0.63
H3F3B-201ENST00000254810 RBM19Q9Y4C8 960 aaKnown RBP18.97■□□□□ 0.63
H3F3B-201ENST00000254810 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
H3F3B-201ENST00000254810 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
H3F3B-201ENST00000254810 CCER2I3L3R5 266 aa18.96■□□□□ 0.63
H3F3B-201ENST00000254810 ANP32CO43423 234 aa18.94■□□□□ 0.62
H3F3B-201ENST00000254810 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
H3F3B-201ENST00000254810 NEFLP07196 543 aa18.91■□□□□ 0.62
H3F3B-201ENST00000254810 PTPRKQ15262 1439 aa18.89■□□□□ 0.62
H3F3B-201ENST00000254810 CADPSQ9ULU8 1353 aa18.89■□□□□ 0.61
H3F3B-201ENST00000254810 FYCO1Q9BQS8 1478 aa18.87■□□□□ 0.61
H3F3B-201ENST00000254810 TONSLQ96HA7 1378 aa18.86■□□□□ 0.61
H3F3B-201ENST00000254810 CCDC18Q5T9S5 1454 aa18.85■□□□□ 0.61
H3F3B-201ENST00000254810 CASKIN1Q8WXD9 1431 aa18.85■□□□□ 0.61
H3F3B-201ENST00000254810 FGD6Q6ZV73 1430 aa18.85■□□□□ 0.61
H3F3B-201ENST00000254810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.617e-39■□□□□ 9.5
H3F3B-201ENST00000254810 RAD54L2Q9Y4B4 1467 aa18.84■□□□□ 0.61
H3F3B-201ENST00000254810 MSH5O43196 834 aa18.83■□□□□ 0.61
H3F3B-201ENST00000254810 KDM5BQ9UGL1 1544 aa18.82■□□□□ 0.6
H3F3B-201ENST00000254810 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.62e-9■■■■□ 20.2
H3F3B-201ENST00000254810 BCL11AQ9H165 835 aa18.82■□□□□ 0.6
H3F3B-201ENST00000254810 IRX6P78412 446 aaPredicted RBP18.81■□□□□ 0.6
H3F3B-201ENST00000254810 PTPN23Q9H3S7 1636 aa18.79■□□□□ 0.6
H3F3B-201ENST00000254810 HFM1A2PYH4 1435 aa18.78■□□□□ 0.6
H3F3B-201ENST00000254810 UACAQ9BZF9 1416 aa18.78■□□□□ 0.6
H3F3B-201ENST00000254810 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
H3F3B-201ENST00000254810 SNAPC4Q5SXM2 1469 aa18.77■□□□□ 0.6
H3F3B-201ENST00000254810 HNRNPUQ00839 825 aaKnown RBP eCLIP18.76■□□□□ 0.59
H3F3B-201ENST00000254810 NAIPQ13075 1403 aa18.76■□□□□ 0.59
H3F3B-201ENST00000254810 LRRIQ1Q96JM4 1722 aa18.75■□□□□ 0.59
H3F3B-201ENST00000254810 FANCD2Q9BXW9 1451 aa18.74■□□□□ 0.59
H3F3B-201ENST00000254810 ABCA10Q8WWZ4 1543 aa18.72■□□□□ 0.59
H3F3B-201ENST00000254810 WASHC2AQ641Q2 1341 aa18.72■□□□□ 0.59
H3F3B-201ENST00000254810 POLA1P09884 1462 aaPredicted RBP18.72■□□□□ 0.59
H3F3B-201ENST00000254810 MTUS2Q5JR59 1369 aa18.72■□□□□ 0.59
H3F3B-201ENST00000254810 CTTNBP2Q8WZ74 1663 aa18.72■□□□□ 0.59
H3F3B-201ENST00000254810 CCDC184Q52MB2 194 aa18.71■□□□□ 0.59
H3F3B-201ENST00000254810 NCOA2Q15596 1464 aa18.69■□□□□ 0.58
H3F3B-201ENST00000254810 FMN1Q68DA7 1419 aa18.68■□□□□ 0.58
H3F3B-201ENST00000254810 HSPA5P11021 654 aaKnown RBP18.68■□□□□ 0.58
H3F3B-201ENST00000254810 DENND4BO75064 1496 aaPredicted RBP18.68■□□□□ 0.58
H3F3B-201ENST00000254810 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
H3F3B-201ENST00000254810 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
H3F3B-201ENST00000254810 MYOM3Q5VTT5 1437 aa18.66■□□□□ 0.58
H3F3B-201ENST00000254810 CC2D2AQ9P2K1 1620 aa18.66■□□□□ 0.58
H3F3B-201ENST00000254810 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
H3F3B-201ENST00000254810 CUL7Q14999 1698 aa18.64■□□□□ 0.58
H3F3B-201ENST00000254810 GRIN2BQ13224 1484 aa18.63■□□□□ 0.57
H3F3B-201ENST00000254810 CHIC2Q9UKJ5 165 aa18.63■□□□□ 0.57
H3F3B-201ENST00000254810 C11orf95C9JLR9 678 aaPredicted RBP18.62■□□□□ 0.57
H3F3B-201ENST00000254810 KDM6BO15054 1643 aa18.62■□□□□ 0.57
H3F3B-201ENST00000254810 MAGI3Q5TCQ9 1506 aa18.62■□□□□ 0.57
H3F3B-201ENST00000254810 NESP48681 1621 aa18.61■□□□□ 0.57
H3F3B-201ENST00000254810 SAMD9Q5K651 1589 aa18.61■□□□□ 0.57
H3F3B-201ENST00000254810 FANCIQ9NVI1 1328 aa18.6■□□□□ 0.57
H3F3B-201ENST00000254810 CDK11AQ9UQ88 783 aaPredicted RBP18.59■□□□□ 0.57
H3F3B-201ENST00000254810 SUPT6HQ7KZ85 1726 aaKnown RBP18.58■□□□□ 0.56
H3F3B-201ENST00000254810 FOXD1Q16676 465 aa18.57■□□□□ 0.56
H3F3B-201ENST00000254810 UGGT2Q9NYU1 1516 aa18.57■□□□□ 0.56
H3F3B-201ENST00000254810 CNTLNQ9NXG0 1405 aa18.56■□□□□ 0.56
H3F3B-201ENST00000254810 TDRD9Q8NDG6 1382 aaKnown RBP18.55■□□□□ 0.56
H3F3B-201ENST00000254810 ARHGEF11O15085 1522 aa18.55■□□□□ 0.56
H3F3B-201ENST00000254810 EHBP1L1Q8N3D4 1523 aa18.54■□□□□ 0.56
H3F3B-201ENST00000254810 EIF4G2P78344 907 aaKnown RBP eCLIP18.54■□□□□ 0.56
H3F3B-201ENST00000254810 L3MBTL2Q969R5 705 aa18.53■□□□□ 0.56
H3F3B-201ENST00000254810 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
H3F3B-201ENST00000254810 HECW1Q76N89 1606 aa18.53■□□□□ 0.56
H3F3B-201ENST00000254810 GCC2Q8IWJ2 1684 aa18.52■□□□□ 0.56
H3F3B-201ENST00000254810 PRKRIP1Q9H875 184 aaPredicted RBP18.51■□□□□ 0.55
H3F3B-201ENST00000254810 B4GALNT3Q6L9W6 998 aa18.51■□□□□ 0.55
H3F3B-201ENST00000254810 PPP4R2Q9NY27 417 aa18.51■□□□□ 0.55
H3F3B-201ENST00000254810 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
H3F3B-201ENST00000254810 URB2Q14146 1524 aaKnown RBP18.5■□□□□ 0.55
H3F3B-201ENST00000254810 MPHOSPH9Q99550 1183 aa18.5■□□□□ 0.55
H3F3B-201ENST00000254810 NCOA1Q15788 1441 aa18.5■□□□□ 0.55
H3F3B-201ENST00000254810 TCOF1Q13428 1488 aaKnown RBP18.49■□□□□ 0.55
H3F3B-201ENST00000254810 THOC2Q8NI27 1593 aaKnown RBP18.49■□□□□ 0.55
H3F3B-201ENST00000254810 NBPF8Q3BBV2 869 aa18.48■□□□□ 0.55
H3F3B-201ENST00000254810 ABCA5Q8WWZ7 1642 aa18.48■□□□□ 0.55
H3F3B-201ENST00000254810 MRS2Q9HD23 443 aa18.47■□□□□ 0.55
H3F3B-201ENST00000254810 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
H3F3B-201ENST00000254810 ERICH6BQ5W0A0 696 aa18.44■□□□□ 0.54
H3F3B-201ENST00000254810 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
H3F3B-201ENST00000254810 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms