RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 CUX2O14529 1486 aa22.41■■□□□ 1.18
SLC6A8-201ENST00000253122 FGD5Q6ZNL6 1462 aa22.39■■□□□ 1.17
SLC6A8-201ENST00000253122 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
SLC6A8-201ENST00000253122 KCNH8Q96L42 1107 aa22.36■■□□□ 1.17
SLC6A8-201ENST00000253122 KIF21BO75037 1637 aa22.33■■□□□ 1.16
SLC6A8-201ENST00000253122 RAPGEF2Q9Y4G8 1499 aa22.31■■□□□ 1.16
SLC6A8-201ENST00000253122 IRX6P78412 446 aaPredicted RBP22.3■■□□□ 1.16
SLC6A8-201ENST00000253122 DNMBPQ6XZF7 1577 aa22.29■■□□□ 1.16
SLC6A8-201ENST00000253122 TOPBP1Q92547 1522 aa22.29■■□□□ 1.16
SLC6A8-201ENST00000253122 RBM19Q9Y4C8 960 aaKnown RBP22.25■■□□□ 1.15
SLC6A8-201ENST00000253122 RAD54L2Q9Y4B4 1467 aa22.21■■□□□ 1.15
SLC6A8-201ENST00000253122 HNRNPUQ00839 825 aaKnown RBP eCLIP22.21■■□□□ 1.15
SLC6A8-201ENST00000253122 POLA1P09884 1462 aaPredicted RBP22.2■■□□□ 1.14
SLC6A8-201ENST00000253122 CARMIL1Q5VZK9 1371 aa22.2■■□□□ 1.14
SLC6A8-201ENST00000253122 PRXQ9BXM0 1461 aa22.18■■□□□ 1.14
SLC6A8-201ENST00000253122 ERCC6Q03468 1493 aa22.17■■□□□ 1.14
SLC6A8-201ENST00000253122 ERICH3Q5RHP9 1530 aa22.17■■□□□ 1.14
SLC6A8-201ENST00000253122 IGF1RP08069 1367 aa22.16■■□□□ 1.14
SLC6A8-201ENST00000253122 URB2Q14146 1524 aaKnown RBP22.16■■□□□ 1.14
SLC6A8-201ENST00000253122 KANK4Q5T7N3 995 aaPredicted RBP22.15■■□□□ 1.14
SLC6A8-201ENST00000253122 SIN3AQ96ST3 1273 aa22.15■■□□□ 1.14
SLC6A8-201ENST00000253122 VPS8Q8N3P4 1428 aa22.15■■□□□ 1.14
SLC6A8-201ENST00000253122 P3H3Q8IVL6 736 aa22.14■■□□□ 1.13
SLC6A8-201ENST00000253122 POLR3GLQ9BT43 218 aa22.14■■□□□ 1.13
SLC6A8-201ENST00000253122 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
SLC6A8-201ENST00000253122 DHX57Q6P158 1386 aaKnown RBP22.1■■□□□ 1.13
SLC6A8-201ENST00000253122 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
SLC6A8-201ENST00000253122 KIF21AQ7Z4S6 1674 aa22.08■■□□□ 1.13
SLC6A8-201ENST00000253122 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
SLC6A8-201ENST00000253122 RTL5Q5HYW3 569 aaPredicted RBP22.04■■□□□ 1.12
SLC6A8-201ENST00000253122 NBR1Q14596 966 aa22.03■■□□□ 1.12
SLC6A8-201ENST00000253122 GAPVD1Q14C86 1478 aa21.99■■□□□ 1.11
SLC6A8-201ENST00000253122 FAM9BQ8IZU0 186 aa21.96■■□□□ 1.11
SLC6A8-201ENST00000253122 TONSLQ96HA7 1378 aa21.96■■□□□ 1.11
SLC6A8-201ENST00000253122 CCNB3Q8WWL7 1395 aa21.94■■□□□ 1.1
SLC6A8-201ENST00000253122 SENP3-EIF4A1A0A087X0R7 540 aa21.93■■□□□ 1.1
SLC6A8-201ENST00000253122 CUL7Q14999 1698 aa21.86■■□□□ 1.09
SLC6A8-201ENST00000253122 RAB3GAP2Q9H2M9 1393 aa21.85■■□□□ 1.09
SLC6A8-201ENST00000253122 AQRO60306 1485 aaKnown RBP eCLIP21.84■■□□□ 1.095e-14■■■■■ 30.2
SLC6A8-201ENST00000253122 IFT140Q96RY7 1462 aa21.84■■□□□ 1.09
SLC6A8-201ENST00000253122 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
SLC6A8-201ENST00000253122 ANP32AP39687 249 aaKnown RBP21.8■■□□□ 1.08
SLC6A8-201ENST00000253122 ARAP1Q96P48 1450 aa21.8■■□□□ 1.08
SLC6A8-201ENST00000253122 CCER2I3L3R5 266 aa21.8■■□□□ 1.08
SLC6A8-201ENST00000253122 NPM2Q86SE8 214 aaKnown RBP21.79■■□□□ 1.08
SLC6A8-201ENST00000253122 ARHGAP35Q9NRY4 1499 aa21.79■■□□□ 1.08
SLC6A8-201ENST00000253122 FBLN2P98095 1184 aa21.79■■□□□ 1.08
SLC6A8-201ENST00000253122 WDR62O43379 1518 aa21.77■■□□□ 1.08
SLC6A8-201ENST00000253122 MRS2Q9HD23 443 aa21.77■■□□□ 1.08
SLC6A8-201ENST00000253122 ABCA5Q8WWZ7 1642 aa21.77■■□□□ 1.08
SLC6A8-201ENST00000253122 GRIN2BQ13224 1484 aa21.77■■□□□ 1.07
SLC6A8-201ENST00000253122 DEKP35659 375 aaKnown RBP21.76■■□□□ 1.07
SLC6A8-201ENST00000253122 WDR97A6NE52 1622 aa21.75■■□□□ 1.07
SLC6A8-201ENST00000253122 MYT1LQ9UL68 1186 aa21.75■■□□□ 1.07
SLC6A8-201ENST00000253122 TARBP1Q13395 1621 aaKnown RBP21.74■■□□□ 1.07
SLC6A8-201ENST00000253122 FHAD1B1AJZ9 1412 aa21.74■■□□□ 1.07
SLC6A8-201ENST00000253122 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
SLC6A8-201ENST00000253122 ZNF326Q5BKZ1 582 aaKnown RBP21.71■■□□□ 1.07
SLC6A8-201ENST00000253122 PPP4R2Q9NY27 417 aa21.71■■□□□ 1.07
SLC6A8-201ENST00000253122 CCDC136Q96JN2 1154 aa21.7■■□□□ 1.06
SLC6A8-201ENST00000253122 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
SLC6A8-201ENST00000253122 ZNF608Q9ULD9 1512 aaPredicted RBP21.69■■□□□ 1.06
SLC6A8-201ENST00000253122 FHOD3Q2V2M9 1422 aa21.69■■□□□ 1.06
SLC6A8-201ENST00000253122 PPP1R15AO75807 674 aaPredicted RBP21.68■■□□□ 1.06
SLC6A8-201ENST00000253122 CHIC2Q9UKJ5 165 aa21.68■■□□□ 1.06
SLC6A8-201ENST00000253122 DAXXQ9UER7 740 aaPredicted RBP21.67■■□□□ 1.06
SLC6A8-201ENST00000253122 ZBTB47Q9UFB7 747 aaPredicted RBP21.67■■□□□ 1.06
SLC6A8-201ENST00000253122 MSH5O43196 834 aa21.63■■□□□ 1.05
SLC6A8-201ENST00000253122 EFCAB5A4FU69 1503 aa21.62■■□□□ 1.05
SLC6A8-201ENST00000253122 NOP58Q9Y2X3 529 aaKnown RBP21.62■■□□□ 1.05
SLC6A8-201ENST00000253122 ARID3CA6NKF2 412 aa21.61■■□□□ 1.05
SLC6A8-201ENST00000253122 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
SLC6A8-201ENST00000253122 FMN1Q68DA7 1419 aa21.6■■□□□ 1.05
SLC6A8-201ENST00000253122 EIF4G2P78344 907 aaKnown RBP eCLIP21.6■■□□□ 1.054e-14■■□□□ 12
SLC6A8-201ENST00000253122 SNAPC4Q5SXM2 1469 aa21.6■■□□□ 1.05
SLC6A8-201ENST00000253122 CTTNBP2Q8WZ74 1663 aa21.6■■□□□ 1.05
SLC6A8-201ENST00000253122 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
SLC6A8-201ENST00000253122 RTN4Q9NQC3 1192 aaKnown RBP21.58■■□□□ 1.05
SLC6A8-201ENST00000253122 TIMELESSQ9UNS1 1208 aa21.58■■□□□ 1.04
SLC6A8-201ENST00000253122 RRP7BPQ9NSQ0 103 aa21.58■■□□□ 1.04
SLC6A8-201ENST00000253122 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.04
SLC6A8-201ENST00000253122 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
SLC6A8-201ENST00000253122 FANCIQ9NVI1 1328 aa21.55■■□□□ 1.04
SLC6A8-201ENST00000253122 EIF4G3O43432 1585 aaKnown RBP21.53■■□□□ 1.04
SLC6A8-201ENST00000253122 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
SLC6A8-201ENST00000253122 HSPA5P11021 654 aaKnown RBP21.49■■□□□ 1.03
SLC6A8-201ENST00000253122 MTUS2Q5JR59 1369 aa21.48■■□□□ 1.03
SLC6A8-201ENST00000253122 IQGAP2Q13576 1575 aa21.48■■□□□ 1.03
SLC6A8-201ENST00000253122 EIF5BO60841 1220 aaKnown RBP21.47■■□□□ 1.03
SLC6A8-201ENST00000253122 CASKIN1Q8WXD9 1431 aa21.47■■□□□ 1.03
SLC6A8-201ENST00000253122 GRIN2AQ12879 1464 aa21.46■■□□□ 1.03
SLC6A8-201ENST00000253122 FYCO1Q9BQS8 1478 aa21.46■■□□□ 1.03
SLC6A8-201ENST00000253122 PCF11O94913 1555 aaKnown RBP21.45■■□□□ 1.02
SLC6A8-201ENST00000253122 TIAM1Q13009 1591 aa21.44■■□□□ 1.02
SLC6A8-201ENST00000253122 LAS1LQ9Y4W2 734 aaKnown RBP21.44■■□□□ 1.02
SLC6A8-201ENST00000253122 SYNJ2O15056 1496 aa21.44■■□□□ 1.02
SLC6A8-201ENST00000253122 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
SLC6A8-201ENST00000253122 KIAA0586Q9BVV6 1533 aa21.42■■□□□ 1.02
SLC6A8-201ENST00000253122 TMC1Q8TDI8 760 aa21.42■■□□□ 1.02
SLC6A8-201ENST00000253122 LRRC9Q6ZRR7 1453 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms