RNA–Protein interactions for RNA: ENST00000252934.9

ATXN10-201, Transcript of ataxin 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN10, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN10-201ENST00000252934 ERCC6Q03468 1493 aa17.36■□□□□ 0.37
ATXN10-201ENST00000252934 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
ATXN10-201ENST00000252934 PAK3O75914 559 aaPredicted RBP17.34■□□□□ 0.37
ATXN10-201ENST00000252934 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
ATXN10-201ENST00000252934 B4GALNT3Q6L9W6 998 aa17.33■□□□□ 0.36
ATXN10-201ENST00000252934 SOGA1O94964 1423 aa17.32■□□□□ 0.36
ATXN10-201ENST00000252934 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
ATXN10-201ENST00000252934 SIN3AQ96ST3 1273 aa17.26■□□□□ 0.35
ATXN10-201ENST00000252934 CEP164Q9UPV0 1460 aa17.26■□□□□ 0.35
ATXN10-201ENST00000252934 NPM2Q86SE8 214 aaKnown RBP17.26■□□□□ 0.35
ATXN10-201ENST00000252934 RUSC2Q8N2Y8 1516 aa17.23■□□□□ 0.35
ATXN10-201ENST00000252934 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
ATXN10-201ENST00000252934 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
ATXN10-201ENST00000252934 ANP32CO43423 234 aa17.19■□□□□ 0.34
ATXN10-201ENST00000252934 LAS1LQ9Y4W2 734 aaKnown RBP17.18■□□□□ 0.34
ATXN10-201ENST00000252934 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
ATXN10-201ENST00000252934 PRDM2Q13029 1718 aa17.16■□□□□ 0.34
ATXN10-201ENST00000252934 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
ATXN10-201ENST00000252934 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
ATXN10-201ENST00000252934 DHX57Q6P158 1386 aaKnown RBP17.15■□□□□ 0.34
ATXN10-201ENST00000252934 MRC2Q9UBG0 1479 aa17.13■□□□□ 0.33
ATXN10-201ENST00000252934 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
ATXN10-201ENST00000252934 KANK4Q5T7N3 995 aaPredicted RBP17.11■□□□□ 0.33
ATXN10-201ENST00000252934 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
ATXN10-201ENST00000252934 FAM9BQ8IZU0 186 aa17.1■□□□□ 0.33
ATXN10-201ENST00000252934 CUX1P39880 1505 aa17.08■□□□□ 0.32
ATXN10-201ENST00000252934 TNIKQ9UKE5 1360 aa17.07■□□□□ 0.32
ATXN10-201ENST00000252934 TOPBP1Q92547 1522 aa17.07■□□□□ 0.32
ATXN10-201ENST00000252934 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
ATXN10-201ENST00000252934 P3H3Q8IVL6 736 aa17.04■□□□□ 0.32
ATXN10-201ENST00000252934 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
ATXN10-201ENST00000252934 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
ATXN10-201ENST00000252934 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
ATXN10-201ENST00000252934 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
ATXN10-201ENST00000252934 FGD5Q6ZNL6 1462 aa17■□□□□ 0.31
ATXN10-201ENST00000252934 FAM50AQ14320 339 aaKnown RBP16.99■□□□□ 0.31
ATXN10-201ENST00000252934 BRPF3Q9ULD4 1205 aa16.99■□□□□ 0.31
ATXN10-201ENST00000252934 WDR62O43379 1518 aa16.99■□□□□ 0.31
ATXN10-201ENST00000252934 CLIP1P30622 1438 aa16.99■□□□□ 0.31
ATXN10-201ENST00000252934 TOP2BQ02880 1626 aa16.97■□□□□ 0.31
ATXN10-201ENST00000252934 POLA1P09884 1462 aaPredicted RBP16.97■□□□□ 0.31
ATXN10-201ENST00000252934 RAD54L2Q9Y4B4 1467 aa16.97■□□□□ 0.31
ATXN10-201ENST00000252934 ANP32AP39687 249 aaKnown RBP16.96■□□□□ 0.31
ATXN10-201ENST00000252934 POLR3GLQ9BT43 218 aa16.96■□□□□ 0.31
ATXN10-201ENST00000252934 CCDC184Q52MB2 194 aa16.96■□□□□ 0.31
ATXN10-201ENST00000252934 NEFMP07197 916 aa16.95■□□□□ 0.3
ATXN10-201ENST00000252934 PPP4R2Q9NY27 417 aa16.93■□□□□ 0.3
ATXN10-201ENST00000252934 PPP1R15AO75807 674 aaPredicted RBP16.92■□□□□ 0.3
ATXN10-201ENST00000252934 BIVM-ERCC5R4GMW8 1640 aa16.91■□□□□ 0.3
ATXN10-201ENST00000252934 CUX2O14529 1486 aa16.91■□□□□ 0.3
ATXN10-201ENST00000252934 ARXQ96QS3 562 aa16.91■□□□□ 0.3
ATXN10-201ENST00000252934 TDRD9Q8NDG6 1382 aaKnown RBP16.9■□□□□ 0.3
ATXN10-201ENST00000252934 ARID3CA6NKF2 412 aa16.89■□□□□ 0.29
ATXN10-201ENST00000252934 MYT1LQ9UL68 1186 aa16.89■□□□□ 0.29
ATXN10-201ENST00000252934 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
ATXN10-201ENST00000252934 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
ATXN10-201ENST00000252934 SKAP1Q86WV1 359 aa16.83■□□□□ 0.29
ATXN10-201ENST00000252934 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.288e-7■■■□□ 16.4
ATXN10-201ENST00000252934 ZNF608Q9ULD9 1512 aaPredicted RBP16.83■□□□□ 0.28
ATXN10-201ENST00000252934 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
ATXN10-201ENST00000252934 GOLGA3Q08378 1498 aa16.81■□□□□ 0.28
ATXN10-201ENST00000252934 UBE2Q2Q8WVN8 375 aa16.81■□□□□ 0.28
ATXN10-201ENST00000252934 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
ATXN10-201ENST00000252934 ABCA10Q8WWZ4 1543 aa16.78■□□□□ 0.28
ATXN10-201ENST00000252934 RAB3GAP2Q9H2M9 1393 aa16.78■□□□□ 0.28
ATXN10-201ENST00000252934 MRS2Q9HD23 443 aa16.78■□□□□ 0.28
ATXN10-201ENST00000252934 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
ATXN10-201ENST00000252934 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
ATXN10-201ENST00000252934 WDR97A6NE52 1622 aa16.76■□□□□ 0.27
ATXN10-201ENST00000252934 VPS8Q8N3P4 1428 aa16.76■□□□□ 0.27
ATXN10-201ENST00000252934 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
ATXN10-201ENST00000252934 RAPGEF2Q9Y4G8 1499 aa16.75■□□□□ 0.27
ATXN10-201ENST00000252934 GAPVD1Q14C86 1478 aa16.75■□□□□ 0.27
ATXN10-201ENST00000252934 ARID4BQ4LE39 1312 aaPredicted RBP16.74■□□□□ 0.27
ATXN10-201ENST00000252934 FBLN2P98095 1184 aa16.73■□□□□ 0.27
ATXN10-201ENST00000252934 C11orf95C9JLR9 678 aaPredicted RBP16.71■□□□□ 0.27
ATXN10-201ENST00000252934 EEA1Q15075 1411 aa16.71■□□□□ 0.27
ATXN10-201ENST00000252934 PKNOX2Q96KN3 472 aa16.69■□□□□ 0.26
ATXN10-201ENST00000252934 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
ATXN10-201ENST00000252934 IGF1RP08069 1367 aa16.68■□□□□ 0.26
ATXN10-201ENST00000252934 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
ATXN10-201ENST00000252934 GRIN2BQ13224 1484 aa16.66■□□□□ 0.26
ATXN10-201ENST00000252934 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
ATXN10-201ENST00000252934 VSIG10Q8N0Z9 540 aa16.65■□□□□ 0.26
ATXN10-201ENST00000252934 CHMP7Q8WUX9 453 aaPredicted RBP16.65■□□□□ 0.26
ATXN10-201ENST00000252934 CCNB3Q8WWL7 1395 aa16.63■□□□□ 0.25
ATXN10-201ENST00000252934 TONSLQ96HA7 1378 aa16.63■□□□□ 0.25
ATXN10-201ENST00000252934 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
ATXN10-201ENST00000252934 CARMIL1Q5VZK9 1371 aa16.62■□□□□ 0.25
ATXN10-201ENST00000252934 FRAT1Q92837 279 aaPredicted RBP16.61■□□□□ 0.25
ATXN10-201ENST00000252934 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
ATXN10-201ENST00000252934 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
ATXN10-201ENST00000252934 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
ATXN10-201ENST00000252934 CHIC2Q9UKJ5 165 aa16.57■□□□□ 0.24
ATXN10-201ENST00000252934 ERICH3Q5RHP9 1530 aa16.57■□□□□ 0.24
ATXN10-201ENST00000252934 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
ATXN10-201ENST00000252934 FHAD1B1AJZ9 1412 aa16.54■□□□□ 0.24
ATXN10-201ENST00000252934 GSE1Q14687 1217 aa16.53■□□□□ 0.24
ATXN10-201ENST00000252934 FOXD1Q16676 465 aa16.53■□□□□ 0.24
ATXN10-201ENST00000252934 MAGI1Q96QZ7 1491 aaPredicted RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms