RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 CCNB3Q8WWL7 1395 aa21.83■■□□□ 1.08
SAFB2-201ENST00000252542 ARHGAP35Q9NRY4 1499 aa21.83■■□□□ 1.08
SAFB2-201ENST00000252542 TRIM52Q96A61 297 aa21.76■■□□□ 1.07
SAFB2-201ENST00000252542 CNGB1Q14028 1251 aaPredicted RBP21.75■■□□□ 1.07
SAFB2-201ENST00000252542 MTUS2Q5JR59 1369 aa21.73■■□□□ 1.07
SAFB2-201ENST00000252542 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
SAFB2-201ENST00000252542 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
SAFB2-201ENST00000252542 DHX57Q6P158 1386 aaKnown RBP21.69■■□□□ 1.06
SAFB2-201ENST00000252542 POLA1P09884 1462 aaPredicted RBP21.69■■□□□ 1.06
SAFB2-201ENST00000252542 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
SAFB2-201ENST00000252542 RAB3GAP2Q9H2M9 1393 aa21.67■■□□□ 1.06
SAFB2-201ENST00000252542 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
SAFB2-201ENST00000252542 ZNF777Q9ULD5 760 aaPredicted RBP21.65■■□□□ 1.06
SAFB2-201ENST00000252542 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
SAFB2-201ENST00000252542 DDX10Q13206 875 aaKnown RBP21.64■■□□□ 1.06
SAFB2-201ENST00000252542 PDS5BQ9NTI5 1447 aa21.61■■□□□ 1.05
SAFB2-201ENST00000252542 AQRO60306 1485 aaKnown RBP eCLIP21.61■■□□□ 1.053e-7■■■■□ 21
SAFB2-201ENST00000252542 MYT1Q01538 1121 aa21.61■■□□□ 1.05
SAFB2-201ENST00000252542 CHMP7Q8WUX9 453 aaPredicted RBP21.56■■□□□ 1.04
SAFB2-201ENST00000252542 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
SAFB2-201ENST00000252542 FOXD1Q16676 465 aa21.53■■□□□ 1.04
SAFB2-201ENST00000252542 POLR3GLQ9BT43 218 aa21.53■■□□□ 1.04
SAFB2-201ENST00000252542 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
SAFB2-201ENST00000252542 GAPVD1Q14C86 1478 aa21.52■■□□□ 1.04
SAFB2-201ENST00000252542 KCNH8Q96L42 1107 aa21.5■■□□□ 1.03
SAFB2-201ENST00000252542 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
SAFB2-201ENST00000252542 SETD5Q9C0A6 1442 aa21.47■■□□□ 1.03
SAFB2-201ENST00000252542 LRRC9Q6ZRR7 1453 aa21.47■■□□□ 1.03
SAFB2-201ENST00000252542 ERCC6Q03468 1493 aa21.44■■□□□ 1.02
SAFB2-201ENST00000252542 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
SAFB2-201ENST00000252542 RRBP1Q9P2E9 1410 aaKnown RBP21.43■■□□□ 1.02
SAFB2-201ENST00000252542 ABCA10Q8WWZ4 1543 aa21.4■■□□□ 1.02
SAFB2-201ENST00000252542 TONSLQ96HA7 1378 aa21.4■■□□□ 1.02
SAFB2-201ENST00000252542 BCANQ96GW7 911 aa21.39■■□□□ 1.02
SAFB2-201ENST00000252542 FMN1Q68DA7 1419 aa21.36■■□□□ 1.01
SAFB2-201ENST00000252542 ZNF644Q9H582 1327 aaPredicted RBP21.35■■□□□ 1.01
SAFB2-201ENST00000252542 PCF11O94913 1555 aaKnown RBP21.35■■□□□ 1.01
SAFB2-201ENST00000252542 TIAM1Q13009 1591 aa21.35■■□□□ 1.01
SAFB2-201ENST00000252542 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1
SAFB2-201ENST00000252542 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
SAFB2-201ENST00000252542 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
SAFB2-201ENST00000252542 CASKIN1Q8WXD9 1431 aa21.26■□□□□ 0.99
SAFB2-201ENST00000252542 CDK11AQ9UQ88 783 aaPredicted RBP21.25■□□□□ 0.99
SAFB2-201ENST00000252542 CFDP1Q9UEE9 299 aaPredicted RBP21.23■□□□□ 0.99
SAFB2-201ENST00000252542 FGD6Q6ZV73 1430 aa21.23■□□□□ 0.99
SAFB2-201ENST00000252542 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
SAFB2-201ENST00000252542 SLC4A1APQ9BWU0 796 aaKnown RBP21.22■□□□□ 0.99
SAFB2-201ENST00000252542 ANP32CO43423 234 aa21.21■□□□□ 0.99
SAFB2-201ENST00000252542 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
SAFB2-201ENST00000252542 NCOA2Q15596 1464 aa21.18■□□□□ 0.98
SAFB2-201ENST00000252542 JPH4Q96JJ6 628 aa21.17■□□□□ 0.98
SAFB2-201ENST00000252542 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
SAFB2-201ENST00000252542 PTPRKQ15262 1439 aa21.16■□□□□ 0.98
SAFB2-201ENST00000252542 FYCO1Q9BQS8 1478 aa21.15■□□□□ 0.98
SAFB2-201ENST00000252542 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
SAFB2-201ENST00000252542 CDK13Q14004 1512 aaKnown RBP21.15■□□□□ 0.98
SAFB2-201ENST00000252542 KDM2AQ9Y2K7 1162 aa21.14■□□□□ 0.97
SAFB2-201ENST00000252542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.14■□□□□ 0.971e-6■■■□□ 15.5
SAFB2-201ENST00000252542 MPHOSPH9Q99550 1183 aa21.12■□□□□ 0.97
SAFB2-201ENST00000252542 CCDC18Q5T9S5 1454 aa21.11■□□□□ 0.97
SAFB2-201ENST00000252542 PLEKHD1A6NEE1 506 aa21.11■□□□□ 0.97
SAFB2-201ENST00000252542 PRDM2Q13029 1718 aa21.11■□□□□ 0.97
SAFB2-201ENST00000252542 MRC2Q9UBG0 1479 aa21.1■□□□□ 0.97
SAFB2-201ENST00000252542 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
SAFB2-201ENST00000252542 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
SAFB2-201ENST00000252542 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
SAFB2-201ENST00000252542 GRIN2BQ13224 1484 aa21.07■□□□□ 0.96
SAFB2-201ENST00000252542 SNAPC4Q5SXM2 1469 aa21.07■□□□□ 0.96
SAFB2-201ENST00000252542 L3MBTL2Q969R5 705 aa21.06■□□□□ 0.96
SAFB2-201ENST00000252542 MAPKBP1O60336 1514 aa21.05■□□□□ 0.96
SAFB2-201ENST00000252542 EFCAB5A4FU69 1503 aa21.04■□□□□ 0.96
SAFB2-201ENST00000252542 HSPA5P11021 654 aaKnown RBP21.03■□□□□ 0.96
SAFB2-201ENST00000252542 HNRNPMP52272 730 aaKnown RBP eCLIP21.03■□□□□ 0.966e-8■■■■■ 29.3
SAFB2-201ENST00000252542 CUL7Q14999 1698 aa21.02■□□□□ 0.96
SAFB2-201ENST00000252542 IRX6P78412 446 aaPredicted RBP21.02■□□□□ 0.96
SAFB2-201ENST00000252542 FKBP8Q14318 412 aa21.01■□□□□ 0.95
SAFB2-201ENST00000252542 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
SAFB2-201ENST00000252542 RGL3Q3MIN7 710 aa21■□□□□ 0.95
SAFB2-201ENST00000252542 PRG4Q92954 1404 aaPredicted RBP21■□□□□ 0.95
SAFB2-201ENST00000252542 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.95
SAFB2-201ENST00000252542 TSPY4P0CV99 314 aa20.99■□□□□ 0.95
SAFB2-201ENST00000252542 TSPY10P0CW01 314 aa20.99■□□□□ 0.95
SAFB2-201ENST00000252542 NEFLP07196 543 aa20.97■□□□□ 0.95
SAFB2-201ENST00000252542 EIF4G2P78344 907 aaKnown RBP eCLIP20.97■□□□□ 0.95
SAFB2-201ENST00000252542 NAIPQ13075 1403 aa20.97■□□□□ 0.95
SAFB2-201ENST00000252542 EPRSP07814 1512 aaKnown RBP20.96■□□□□ 0.95
SAFB2-201ENST00000252542 PKD2Q13563 968 aa20.95■□□□□ 0.94
SAFB2-201ENST00000252542 PLB1Q6P1J6 1458 aa20.94■□□□□ 0.94
SAFB2-201ENST00000252542 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
SAFB2-201ENST00000252542 IQGAP2Q13576 1575 aa20.92■□□□□ 0.94
SAFB2-201ENST00000252542 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
SAFB2-201ENST00000252542 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
SAFB2-201ENST00000252542 CTTNBP2Q8WZ74 1663 aa20.91■□□□□ 0.94
SAFB2-201ENST00000252542 UACAQ9BZF9 1416 aa20.9■□□□□ 0.94
SAFB2-201ENST00000252542 SENP3Q9H4L4 574 aaPredicted RBP20.9■□□□□ 0.94
SAFB2-201ENST00000252542 MAGI3Q5TCQ9 1506 aa20.9■□□□□ 0.94
SAFB2-201ENST00000252542 HFM1A2PYH4 1435 aa20.89■□□□□ 0.94
SAFB2-201ENST00000252542 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
SAFB2-201ENST00000252542 TSHZ2Q9NRE2 1034 aa20.88■□□□□ 0.93
SAFB2-201ENST00000252542 TIMELESSQ9UNS1 1208 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms