RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
DHX40-201ENST00000251241 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
DHX40-201ENST00000251241 CEP162Q5TB80 1403 aa14.18□□□□□ -0.14
DHX40-201ENST00000251241 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.14
DHX40-201ENST00000251241 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
DHX40-201ENST00000251241 ZNF608Q9ULD9 1512 aaPredicted RBP14.13□□□□□ -0.15
DHX40-201ENST00000251241 ABCA10Q8WWZ4 1543 aa14.13□□□□□ -0.15
DHX40-201ENST00000251241 EEA1Q15075 1411 aa14.12□□□□□ -0.15
DHX40-201ENST00000251241 AEBP2Q6ZN18 517 aaPredicted RBP14.12□□□□□ -0.15
DHX40-201ENST00000251241 FBLN2P98095 1184 aa14.11□□□□□ -0.15
DHX40-201ENST00000251241 TNIKQ9UKE5 1360 aa14.11□□□□□ -0.15
DHX40-201ENST00000251241 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
DHX40-201ENST00000251241 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
DHX40-201ENST00000251241 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
DHX40-201ENST00000251241 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.15
DHX40-201ENST00000251241 IGF1RP08069 1367 aa14.08□□□□□ -0.16
DHX40-201ENST00000251241 PKNOX2Q96KN3 472 aa14.06□□□□□ -0.16
DHX40-201ENST00000251241 HNRNPUL2Q1KMD3 747 aaKnown RBP14.06□□□□□ -0.16
DHX40-201ENST00000251241 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
DHX40-201ENST00000251241 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
DHX40-201ENST00000251241 A0A0U1RQG5 324 aaPredicted RBP14.01□□□□□ -0.17
DHX40-201ENST00000251241 CLIP1P30622 1438 aa14.01□□□□□ -0.17
DHX40-201ENST00000251241 WDR97A6NE52 1622 aa14.01□□□□□ -0.17
DHX40-201ENST00000251241 GRIN2BQ13224 1484 aa14.01□□□□□ -0.17
DHX40-201ENST00000251241 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
DHX40-201ENST00000251241 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
DHX40-201ENST00000251241 ABCA5Q8WWZ7 1642 aa13.99□□□□□ -0.17
DHX40-201ENST00000251241 UBE2Q2Q8WVN8 375 aa13.98□□□□□ -0.17
DHX40-201ENST00000251241 SNAPC4Q5SXM2 1469 aa13.97□□□□□ -0.17
DHX40-201ENST00000251241 PRXQ9BXM0 1461 aa13.95□□□□□ -0.18
DHX40-201ENST00000251241 DEKP35659 375 aaKnown RBP13.95□□□□□ -0.18
DHX40-201ENST00000251241 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
DHX40-201ENST00000251241 ERICH3Q5RHP9 1530 aa13.94□□□□□ -0.18
DHX40-201ENST00000251241 DAXXQ9UER7 740 aaPredicted RBP13.94□□□□□ -0.18
DHX40-201ENST00000251241 PBRM1Q86U86 1689 aa13.93□□□□□ -0.18
DHX40-201ENST00000251241 NBR1Q14596 966 aa13.93□□□□□ -0.18
DHX40-201ENST00000251241 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
DHX40-201ENST00000251241 KIF21BO75037 1637 aa13.9□□□□□ -0.18
DHX40-201ENST00000251241 CUL7Q14999 1698 aa13.89□□□□□ -0.19
DHX40-201ENST00000251241 P3H3Q8IVL6 736 aa13.88□□□□□ -0.19
DHX40-201ENST00000251241 MAGI1Q96QZ7 1491 aaPredicted RBP13.87□□□□□ -0.19
DHX40-201ENST00000251241 ITGAEP38570 1179 aa13.87□□□□□ -0.19
DHX40-201ENST00000251241 SUPT16HQ9Y5B9 1047 aaKnown RBP13.86□□□□□ -0.19
DHX40-201ENST00000251241 ADAMTS12P58397 1594 aa13.86□□□□□ -0.19
DHX40-201ENST00000251241 TIMELESSQ9UNS1 1208 aa13.85□□□□□ -0.19
DHX40-201ENST00000251241 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
DHX40-201ENST00000251241 GRIN2AQ12879 1464 aa13.83□□□□□ -0.2
DHX40-201ENST00000251241 IL27Q8NEV9 243 aa13.82□□□□□ -0.2
DHX40-201ENST00000251241 VPS8Q8N3P4 1428 aa13.82□□□□□ -0.2
DHX40-201ENST00000251241 MIER1Q8N108 512 aa13.79□□□□□ -0.2
DHX40-201ENST00000251241 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
DHX40-201ENST00000251241 CHD1O14646 1710 aa13.74□□□□□ -0.21
DHX40-201ENST00000251241 OSCARQ8IYS5 282 aa13.74□□□□□ -0.21
DHX40-201ENST00000251241 JPH4Q96JJ6 628 aa13.74□□□□□ -0.21
DHX40-201ENST00000251241 KANK4Q5T7N3 995 aaPredicted RBP13.74□□□□□ -0.21
DHX40-201ENST00000251241 CEP170Q5SW79 1584 aa13.71□□□□□ -0.21
DHX40-201ENST00000251241 KIAA0586Q9BVV6 1533 aa13.71□□□□□ -0.21
DHX40-201ENST00000251241 VSIG10Q8N0Z9 540 aa13.7□□□□□ -0.22
DHX40-201ENST00000251241 CTTNBP2Q8WZ74 1663 aa13.7□□□□□ -0.22
DHX40-201ENST00000251241 IQGAP2Q13576 1575 aa13.69□□□□□ -0.22
DHX40-201ENST00000251241 NUP160Q12769 1436 aa13.69□□□□□ -0.22
DHX40-201ENST00000251241 FHOD3Q2V2M9 1422 aa13.69□□□□□ -0.22
DHX40-201ENST00000251241 ARID3CA6NKF2 412 aa13.67□□□□□ -0.22
DHX40-201ENST00000251241 ARHGAP35Q9NRY4 1499 aa13.67□□□□□ -0.22
DHX40-201ENST00000251241 MSH5O43196 834 aa13.66□□□□□ -0.22
DHX40-201ENST00000251241 FAM50AQ14320 339 aaKnown RBP13.66□□□□□ -0.22
DHX40-201ENST00000251241 ARAP1Q96P48 1450 aa13.64□□□□□ -0.23
DHX40-201ENST00000251241 PRG4Q92954 1404 aaPredicted RBP13.63□□□□□ -0.23
DHX40-201ENST00000251241 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
DHX40-201ENST00000251241 FKBP8Q14318 412 aa13.63□□□□□ -0.23
DHX40-201ENST00000251241 CARMIL2Q6F5E8 1435 aa13.62□□□□□ -0.23
DHX40-201ENST00000251241 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
DHX40-201ENST00000251241 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
DHX40-201ENST00000251241 EFCAB5A4FU69 1503 aa13.57□□□□□ -0.24
DHX40-201ENST00000251241 PDE4CQ08493 712 aa13.57□□□□□ -0.24
DHX40-201ENST00000251241 DISP1Q96F81 1524 aa13.56□□□□□ -0.24
DHX40-201ENST00000251241 PTPRGP23470 1445 aa13.54□□□□□ -0.24
DHX40-201ENST00000251241 FMN1Q68DA7 1419 aa13.54□□□□□ -0.24
DHX40-201ENST00000251241 KIAA0556O60303 1618 aa13.53□□□□□ -0.24
DHX40-201ENST00000251241 RTL5Q5HYW3 569 aaPredicted RBP13.53□□□□□ -0.24
DHX40-201ENST00000251241 ZMYND15Q9H091 742 aa13.53□□□□□ -0.24
DHX40-201ENST00000251241 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
DHX40-201ENST00000251241 ERCC6L2Q5T890 1561 aa13.53□□□□□ -0.24
DHX40-201ENST00000251241 BCL11BQ9C0K0 894 aaPredicted RBP13.53□□□□□ -0.24
DHX40-201ENST00000251241 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
DHX40-201ENST00000251241 CCNB3Q8WWL7 1395 aa13.52□□□□□ -0.24
DHX40-201ENST00000251241 NEFLP07196 543 aa13.5□□□□□ -0.25
DHX40-201ENST00000251241 CYB5RLQ6IPT4 315 aa13.49□□□□□ -0.25
DHX40-201ENST00000251241 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
DHX40-201ENST00000251241 PCF11O94913 1555 aaKnown RBP13.46□□□□□ -0.25
DHX40-201ENST00000251241 CASKIN1Q8WXD9 1431 aa13.45□□□□□ -0.26
DHX40-201ENST00000251241 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
DHX40-201ENST00000251241 GLIPR1L2Q4G1C9 344 aa13.44□□□□□ -0.26
DHX40-201ENST00000251241 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
DHX40-201ENST00000251241 MTUS2Q5JR59 1369 aa13.43□□□□□ -0.26
DHX40-201ENST00000251241 FYCO1Q9BQS8 1478 aa13.42□□□□□ -0.26
DHX40-201ENST00000251241 DHX57Q6P158 1386 aaKnown RBP13.41□□□□□ -0.26
DHX40-201ENST00000251241 ARID4BQ4LE39 1312 aaPredicted RBP13.41□□□□□ -0.26
DHX40-201ENST00000251241 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
DHX40-201ENST00000251241 PDIA4P13667 645 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms