RNA–Protein interactions for RNA: ENST00000244458.6

PACSIN1-201, Transcript of protein kinase C and casein kinase substrate in neurons 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN1, Length 4,231 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1-201ENST00000244458 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
PACSIN1-201ENST00000244458 IGF1RP08069 1367 aa16.67■□□□□ 0.26
PACSIN1-201ENST00000244458 FHOD3Q2V2M9 1422 aa16.67■□□□□ 0.26
PACSIN1-201ENST00000244458 RAD54L2Q9Y4B4 1467 aa16.65■□□□□ 0.26
PACSIN1-201ENST00000244458 KIF21BO75037 1637 aa16.61■□□□□ 0.25
PACSIN1-201ENST00000244458 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
PACSIN1-201ENST00000244458 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
PACSIN1-201ENST00000244458 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
PACSIN1-201ENST00000244458 NESP48681 1621 aa16.59■□□□□ 0.25
PACSIN1-201ENST00000244458 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
PACSIN1-201ENST00000244458 CDK11AQ9UQ88 783 aaPredicted RBP16.58■□□□□ 0.25
PACSIN1-201ENST00000244458 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
PACSIN1-201ENST00000244458 FOXD1Q16676 465 aa16.57■□□□□ 0.24
PACSIN1-201ENST00000244458 CUX1P39880 1505 aa16.56■□□□□ 0.24
PACSIN1-201ENST00000244458 DHX57Q6P158 1386 aaKnown RBP16.54■□□□□ 0.24
PACSIN1-201ENST00000244458 CFTRP13569 1480 aa16.54■□□□□ 0.24
PACSIN1-201ENST00000244458 FHAD1B1AJZ9 1412 aa16.53■□□□□ 0.24
PACSIN1-201ENST00000244458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
PACSIN1-201ENST00000244458 KDM2AQ9Y2K7 1162 aa16.5■□□□□ 0.23
PACSIN1-201ENST00000244458 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
PACSIN1-201ENST00000244458 FKBP8Q14318 412 aa16.5■□□□□ 0.23
PACSIN1-201ENST00000244458 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
PACSIN1-201ENST00000244458 SETD5Q9C0A6 1442 aa16.49■□□□□ 0.23
PACSIN1-201ENST00000244458 PRXQ9BXM0 1461 aa16.48■□□□□ 0.23
PACSIN1-201ENST00000244458 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
PACSIN1-201ENST00000244458 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
PACSIN1-201ENST00000244458 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
PACSIN1-201ENST00000244458 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.23
PACSIN1-201ENST00000244458 PDS5BQ9NTI5 1447 aa16.46■□□□□ 0.23
PACSIN1-201ENST00000244458 IRX6P78412 446 aaPredicted RBP16.44■□□□□ 0.22
PACSIN1-201ENST00000244458 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
PACSIN1-201ENST00000244458 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
PACSIN1-201ENST00000244458 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
PACSIN1-201ENST00000244458 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
PACSIN1-201ENST00000244458 CC2D2AQ9P2K1 1620 aa16.4■□□□□ 0.22
PACSIN1-201ENST00000244458 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
PACSIN1-201ENST00000244458 SALL2Q9Y467 1007 aaPredicted RBP16.38■□□□□ 0.21
PACSIN1-201ENST00000244458 PLEKHD1A6NEE1 506 aa16.38■□□□□ 0.21
PACSIN1-201ENST00000244458 TSPY4P0CV99 314 aa16.37■□□□□ 0.21
PACSIN1-201ENST00000244458 TSPY10P0CW01 314 aa16.37■□□□□ 0.21
PACSIN1-201ENST00000244458 ERICH6Q7L0X2 663 aa16.37■□□□□ 0.21
PACSIN1-201ENST00000244458 HMGXB3Q12766 1538 aa16.36■□□□□ 0.21
PACSIN1-201ENST00000244458 RGL3Q3MIN7 710 aa16.36■□□□□ 0.21
PACSIN1-201ENST00000244458 AQRO60306 1485 aaKnown RBP eCLIP16.36■□□□□ 0.21
PACSIN1-201ENST00000244458 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
PACSIN1-201ENST00000244458 FMN1Q68DA7 1419 aa16.34■□□□□ 0.21
PACSIN1-201ENST00000244458 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
PACSIN1-201ENST00000244458 PPP1R15AO75807 674 aaPredicted RBP16.32■□□□□ 0.2
PACSIN1-201ENST00000244458 MRS2Q9HD23 443 aa16.31■□□□□ 0.2
PACSIN1-201ENST00000244458 GAPVD1Q14C86 1478 aa16.31■□□□□ 0.2
PACSIN1-201ENST00000244458 ERICH3Q5RHP9 1530 aa16.3■□□□□ 0.2
PACSIN1-201ENST00000244458 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
PACSIN1-201ENST00000244458 ZNF644Q9H582 1327 aaPredicted RBP16.3■□□□□ 0.2
PACSIN1-201ENST00000244458 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.2
PACSIN1-201ENST00000244458 MPHOSPH9Q99550 1183 aa16.27■□□□□ 0.2
PACSIN1-201ENST00000244458 TOPBP1Q92547 1522 aa16.26■□□□□ 0.19
PACSIN1-201ENST00000244458 HSPA5P11021 654 aaKnown RBP16.26■□□□□ 0.19
PACSIN1-201ENST00000244458 L3MBTL2Q969R5 705 aa16.24■□□□□ 0.19
PACSIN1-201ENST00000244458 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
PACSIN1-201ENST00000244458 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
PACSIN1-201ENST00000244458 JPH4Q96JJ6 628 aa16.22■□□□□ 0.19
PACSIN1-201ENST00000244458 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
PACSIN1-201ENST00000244458 PKD2Q13563 968 aa16.2■□□□□ 0.18
PACSIN1-201ENST00000244458 HNRNPMP52272 730 aaKnown RBP eCLIP16.18■□□□□ 0.18
PACSIN1-201ENST00000244458 FGD6Q6ZV73 1430 aa16.17■□□□□ 0.18
PACSIN1-201ENST00000244458 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
PACSIN1-201ENST00000244458 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
PACSIN1-201ENST00000244458 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
PACSIN1-201ENST00000244458 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
PACSIN1-201ENST00000244458 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
PACSIN1-201ENST00000244458 CASKIN1Q8WXD9 1431 aa16.12■□□□□ 0.17
PACSIN1-201ENST00000244458 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
PACSIN1-201ENST00000244458 NCOA2Q15596 1464 aa16.09■□□□□ 0.17
PACSIN1-201ENST00000244458 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
PACSIN1-201ENST00000244458 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.16
PACSIN1-201ENST00000244458 NUP155O75694 1391 aa16.07■□□□□ 0.16
PACSIN1-201ENST00000244458 MYOM3Q5VTT5 1437 aa16.07■□□□□ 0.16
PACSIN1-201ENST00000244458 DNMBPQ6XZF7 1577 aa16.06■□□□□ 0.16
PACSIN1-201ENST00000244458 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
PACSIN1-201ENST00000244458 PCF11O94913 1555 aaKnown RBP16.04■□□□□ 0.16
PACSIN1-201ENST00000244458 CARMIL2Q6F5E8 1435 aa16.03■□□□□ 0.16
PACSIN1-201ENST00000244458 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
PACSIN1-201ENST00000244458 FYCO1Q9BQS8 1478 aa16.02■□□□□ 0.15
PACSIN1-201ENST00000244458 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
PACSIN1-201ENST00000244458 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
PACSIN1-201ENST00000244458 CCER2I3L3R5 266 aa15.98■□□□□ 0.15
PACSIN1-201ENST00000244458 CDK13Q14004 1512 aaKnown RBP15.98■□□□□ 0.15
PACSIN1-201ENST00000244458 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
PACSIN1-201ENST00000244458 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
PACSIN1-201ENST00000244458 GRIN2BQ13224 1484 aa15.96■□□□□ 0.15
PACSIN1-201ENST00000244458 UACAQ9BZF9 1416 aa15.96■□□□□ 0.15
PACSIN1-201ENST00000244458 PRG4Q92954 1404 aaPredicted RBP15.96■□□□□ 0.15
PACSIN1-201ENST00000244458 B4GALNT3Q6L9W6 998 aa15.95■□□□□ 0.14
PACSIN1-201ENST00000244458 ANKRD30AQ9BXX3 1397 aa15.94■□□□□ 0.14
PACSIN1-201ENST00000244458 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
PACSIN1-201ENST00000244458 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
PACSIN1-201ENST00000244458 NBPF8Q3BBV2 869 aa15.93■□□□□ 0.14
PACSIN1-201ENST00000244458 CCDC136Q96JN2 1154 aa15.93■□□□□ 0.14
PACSIN1-201ENST00000244458 PTPRKQ15262 1439 aa15.93■□□□□ 0.14
PACSIN1-201ENST00000244458 WASHC2AQ641Q2 1341 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms