RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 FGD5Q6ZNL6 1462 aa6.15□□□□□ -1.43
UFM1-201ENST00000239878 SUPT5HO00267 1087 aaKnown RBP6.13□□□□□ -1.43
UFM1-201ENST00000239878 WRNQ14191 1432 aaPredicted RBP eCLIP6.13□□□□□ -1.43
UFM1-201ENST00000239878 PPP4R3CPQ6ZMV5 832 aa6.13□□□□□ -1.43
UFM1-201ENST00000239878 PBRM1Q86U86 1689 aa6.12□□□□□ -1.43
UFM1-201ENST00000239878 ZNF608Q9ULD9 1512 aaPredicted RBP6.11□□□□□ -1.43
UFM1-201ENST00000239878 TPRNQ4KMQ1 711 aa6.1□□□□□ -1.43
UFM1-201ENST00000239878 RAD54L2Q9Y4B4 1467 aa6.09□□□□□ -1.43
UFM1-201ENST00000239878 ERICH3Q5RHP9 1530 aa6.09□□□□□ -1.43
UFM1-201ENST00000239878 ADAMTS12P58397 1594 aa6.09□□□□□ -1.43
UFM1-201ENST00000239878 TULP1O00294 542 aaPredicted RBP6.08□□□□□ -1.44
UFM1-201ENST00000239878 SOGA1O94964 1423 aa6.07□□□□□ -1.44
UFM1-201ENST00000239878 MAGI1Q96QZ7 1491 aaPredicted RBP6.07□□□□□ -1.44
UFM1-201ENST00000239878 CLASP1Q7Z460 1538 aa6.06□□□□□ -1.44
UFM1-201ENST00000239878 CUL7Q14999 1698 aa6.05□□□□□ -1.44
UFM1-201ENST00000239878 GRIN2BQ13224 1484 aa6.05□□□□□ -1.44
UFM1-201ENST00000239878 DSG3P32926 999 aa6.05□□□□□ -1.44
UFM1-201ENST00000239878 FKBP8Q14318 412 aa6.05□□□□□ -1.44
UFM1-201ENST00000239878 CNKSR2Q8WXI2 1034 aa6.05□□□□□ -1.44
UFM1-201ENST00000239878 CHD1O14646 1710 aa6.05□□□□□ -1.44
UFM1-201ENST00000239878 SHROOM2Q13796 1616 aa6.04□□□□□ -1.44
UFM1-201ENST00000239878 GAPVD1Q14C86 1478 aa6.03□□□□□ -1.44
UFM1-201ENST00000239878 SP7Q8TDD2 431 aaPredicted RBP6.03□□□□□ -1.44
UFM1-201ENST00000239878 AQRO60306 1485 aaKnown RBP eCLIP6.03□□□□□ -1.441e-6■■■■■ 27.1
UFM1-201ENST00000239878 SNAPC4Q5SXM2 1469 aa6.02□□□□□ -1.45
UFM1-201ENST00000239878 SYNJ2O15056 1496 aa6.02□□□□□ -1.45
UFM1-201ENST00000239878 NUP160Q12769 1436 aa6.02□□□□□ -1.45
UFM1-201ENST00000239878 HAP1P54257 671 aaPredicted RBP6.01□□□□□ -1.45
UFM1-201ENST00000239878 RUSC2Q8N2Y8 1516 aa6.01□□□□□ -1.45
UFM1-201ENST00000239878 FOXD4L1Q9NU39 408 aa6.01□□□□□ -1.45
UFM1-201ENST00000239878 CEP170Q5SW79 1584 aa6.01□□□□□ -1.45
UFM1-201ENST00000239878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6□□□□□ -1.455e-10■□□□□ 10.2
UFM1-201ENST00000239878 VSIG10Q8N0Z9 540 aa6□□□□□ -1.45
UFM1-201ENST00000239878 PRXQ9BXM0 1461 aa6□□□□□ -1.45
UFM1-201ENST00000239878 FHAD1B1AJZ9 1412 aa5.99□□□□□ -1.45
UFM1-201ENST00000239878 GRIN2AQ12879 1464 aa5.99□□□□□ -1.45
UFM1-201ENST00000239878 IGF1RP08069 1367 aa5.99□□□□□ -1.45
UFM1-201ENST00000239878 TDRD9Q8NDG6 1382 aaKnown RBP5.98□□□□□ -1.45
UFM1-201ENST00000239878 HOMEZQ8IX15 550 aa5.98□□□□□ -1.45
UFM1-201ENST00000239878 KDM2AQ9Y2K7 1162 aa5.98□□□□□ -1.45
UFM1-201ENST00000239878 KIF21BO75037 1637 aa5.98□□□□□ -1.45
UFM1-201ENST00000239878 KIF27Q86VH2 1401 aa5.98□□□□□ -1.45
UFM1-201ENST00000239878 GTF3C3Q9Y5Q9 886 aa5.97□□□□□ -1.45
UFM1-201ENST00000239878 EEA1Q15075 1411 aa5.96□□□□□ -1.45
UFM1-201ENST00000239878 HRCP23327 699 aa5.94□□□□□ -1.46
UFM1-201ENST00000239878 CTTNBP2Q8WZ74 1663 aa5.94□□□□□ -1.46
UFM1-201ENST00000239878 TTBK1Q5TCY1 1321 aaPredicted RBP5.93□□□□□ -1.46
UFM1-201ENST00000239878 UGGT2Q9NYU1 1516 aa5.93□□□□□ -1.46
UFM1-201ENST00000239878 RIMBP3CA6NJZ7 1639 aa5.92□□□□□ -1.46
UFM1-201ENST00000239878 RIMBP3BA6NNM3 1639 aa5.92□□□□□ -1.46
UFM1-201ENST00000239878 RIMBP3Q9UFD9 1639 aa5.92□□□□□ -1.46
UFM1-201ENST00000239878 SAMD9Q5K651 1589 aa5.92□□□□□ -1.46
UFM1-201ENST00000239878 RAPGEF2Q9Y4G8 1499 aa5.91□□□□□ -1.46
UFM1-201ENST00000239878 KIAA0586Q9BVV6 1533 aa5.91□□□□□ -1.46
UFM1-201ENST00000239878 ARHGEF11O15085 1522 aa5.9□□□□□ -1.46
UFM1-201ENST00000239878 CAPN15O75808 1086 aa5.9□□□□□ -1.46
UFM1-201ENST00000239878 IQGAP2Q13576 1575 aa5.9□□□□□ -1.47
UFM1-201ENST00000239878 ERCC6L2Q5T890 1561 aa5.9□□□□□ -1.47
UFM1-201ENST00000239878 CHRDL2Q6WN34 429 aa5.9□□□□□ -1.47
UFM1-201ENST00000239878 DISP1Q96F81 1524 aa5.89□□□□□ -1.47
UFM1-201ENST00000239878 CARMIL1Q5VZK9 1371 aa5.89□□□□□ -1.47
UFM1-201ENST00000239878 FBLN2P98095 1184 aa5.88□□□□□ -1.47
UFM1-201ENST00000239878 TMEM132AQ24JP5 1023 aa5.88□□□□□ -1.47
UFM1-201ENST00000239878 DNAJC5Q9H3Z4 198 aa5.88□□□□□ -1.47
UFM1-201ENST00000239878 KIAA0556O60303 1618 aa5.88□□□□□ -1.47
UFM1-201ENST00000239878 PPARGC1BQ86YN6 1023 aaKnown RBP5.88□□□□□ -1.47
UFM1-201ENST00000239878 ARAP1Q96P48 1450 aa5.88□□□□□ -1.47
UFM1-201ENST00000239878 RBM42Q9BTD8 480 aaKnown RBP5.86□□□□□ -1.47
UFM1-201ENST00000239878 APLP2Q06481 763 aa5.86□□□□□ -1.47
UFM1-201ENST00000239878 BCL11AQ9H165 835 aa5.85□□□□□ -1.47
UFM1-201ENST00000239878 SPINK5Q9NQ38 1064 aaPredicted RBP5.85□□□□□ -1.47
UFM1-201ENST00000239878 EFCAB5A4FU69 1503 aa5.84□□□□□ -1.47
UFM1-201ENST00000239878 OSCARQ8IYS5 282 aa5.84□□□□□ -1.47
UFM1-201ENST00000239878 TRIM41Q8WV44 630 aa5.84□□□□□ -1.47
UFM1-201ENST00000239878 UHRF1BP1LA0JNW5 1464 aa5.84□□□□□ -1.47
UFM1-201ENST00000239878 ABCA8O94911 1581 aa5.84□□□□□ -1.48
UFM1-201ENST00000239878 ADCY10Q96PN6 1610 aa5.84□□□□□ -1.48
UFM1-201ENST00000239878 GOLGA3Q08378 1498 aa5.83□□□□□ -1.48
UFM1-201ENST00000239878 ERICH6Q7L0X2 663 aa5.83□□□□□ -1.48
UFM1-201ENST00000239878 FAM9AQ8IZU1 332 aaPredicted RBP5.82□□□□□ -1.48
UFM1-201ENST00000239878 U3KPZ7 1027 aaPredicted RBP5.81□□□□□ -1.48
UFM1-201ENST00000239878 PRG4Q92954 1404 aaPredicted RBP5.8□□□□□ -1.48
UFM1-201ENST00000239878 KLHL34Q8N239 644 aa5.8□□□□□ -1.48
UFM1-201ENST00000239878 CHMP7Q8WUX9 453 aaPredicted RBP5.8□□□□□ -1.48
UFM1-201ENST00000239878 MAPKBP1O60336 1514 aa5.8□□□□□ -1.48
UFM1-201ENST00000239878 LRRIQ1Q96JM4 1722 aa5.79□□□□□ -1.48
UFM1-201ENST00000239878 ABCC2Q92887 1545 aa5.79□□□□□ -1.48
UFM1-201ENST00000239878 KDM5BQ9UGL1 1544 aa5.79□□□□□ -1.48
UFM1-201ENST00000239878 ARHGAP35Q9NRY4 1499 aa5.79□□□□□ -1.48
UFM1-201ENST00000239878 PODXL2Q9NZ53 605 aa5.79□□□□□ -1.48
UFM1-201ENST00000239878 TNIKQ9UKE5 1360 aa5.78□□□□□ -1.48
UFM1-201ENST00000239878 ZCCHC11Q5TAX3 1644 aaKnown RBP5.77□□□□□ -1.49
UFM1-201ENST00000239878 RAPGEF6Q8TEU7 1601 aa5.76□□□□□ -1.49
UFM1-201ENST00000239878 GLI2P10070 1586 aa5.76□□□□□ -1.49
UFM1-201ENST00000239878 JPH4Q96JJ6 628 aa5.76□□□□□ -1.49
UFM1-201ENST00000239878 RANGAP1P46060 587 aaPredicted RBP5.75□□□□□ -1.49
UFM1-201ENST00000239878 KIF13AQ9H1H9 1805 aa5.75□□□□□ -1.49
UFM1-201ENST00000239878 PPRC1Q5VV67 1664 aaKnown RBP5.75□□□□□ -1.49
UFM1-201ENST00000239878 NUP153P49790 1475 aaKnown RBP5.75□□□□□ -1.49
UFM1-201ENST00000239878 CARMIL2Q6F5E8 1435 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms