RNA–Protein interactions for RNA: ENST00000237014.7

TTR-201, Transcript of transthyretin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTR, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-201ENST00000237014 SP7Q8TDD2 431 aaPredicted RBP13.06□□□□□ -0.32
TTR-201ENST00000237014 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
TTR-201ENST00000237014 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
TTR-201ENST00000237014 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
TTR-201ENST00000237014 RAD54L2Q9Y4B4 1467 aa13□□□□□ -0.33
TTR-201ENST00000237014 WDR97A6NE52 1622 aa12.97□□□□□ -0.33
TTR-201ENST00000237014 AQRO60306 1485 aaKnown RBP eCLIP12.96□□□□□ -0.34
TTR-201ENST00000237014 SOGA1O94964 1423 aa12.96□□□□□ -0.34
TTR-201ENST00000237014 SYNJ1O43426 1573 aa12.95□□□□□ -0.34
TTR-201ENST00000237014 BIVM-ERCC5R4GMW8 1640 aa12.95□□□□□ -0.34
TTR-201ENST00000237014 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
TTR-201ENST00000237014 TOP2BQ02880 1626 aa12.92□□□□□ -0.34
TTR-201ENST00000237014 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
TTR-201ENST00000237014 WRNQ14191 1432 aaPredicted RBP eCLIP12.91□□□□□ -0.34
TTR-201ENST00000237014 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
TTR-201ENST00000237014 TDRD9Q8NDG6 1382 aaKnown RBP12.91□□□□□ -0.34
TTR-201ENST00000237014 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
TTR-201ENST00000237014 CHD1O14646 1710 aa12.88□□□□□ -0.35
TTR-201ENST00000237014 ABCA5Q8WWZ7 1642 aa12.88□□□□□ -0.35
TTR-201ENST00000237014 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
TTR-201ENST00000237014 PBRM1Q86U86 1689 aa12.85□□□□□ -0.35
TTR-201ENST00000237014 SNAPC4Q5SXM2 1469 aa12.85□□□□□ -0.35
TTR-201ENST00000237014 OSCARQ8IYS5 282 aa12.83□□□□□ -0.36
TTR-201ENST00000237014 GRIN2BQ13224 1484 aa12.83□□□□□ -0.36
TTR-201ENST00000237014 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.36
TTR-201ENST00000237014 GAPVD1Q14C86 1478 aa12.82□□□□□ -0.36
TTR-201ENST00000237014 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
TTR-201ENST00000237014 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
TTR-201ENST00000237014 SYNJ2O15056 1496 aa12.76□□□□□ -0.37
TTR-201ENST00000237014 HAX1O00165 279 aa12.75□□□□□ -0.37
TTR-201ENST00000237014 ADAMTS12P58397 1594 aa12.75□□□□□ -0.37
TTR-201ENST00000237014 SLC4A1APQ9BWU0 796 aaKnown RBP12.75□□□□□ -0.37
TTR-201ENST00000237014 RIMBP3CA6NJZ7 1639 aa12.74□□□□□ -0.37
TTR-201ENST00000237014 RIMBP3BA6NNM3 1639 aa12.74□□□□□ -0.37
TTR-201ENST00000237014 RIMBP3Q9UFD9 1639 aa12.74□□□□□ -0.37
TTR-201ENST00000237014 CLASP1Q7Z460 1538 aa12.74□□□□□ -0.37
TTR-201ENST00000237014 FBLN2P98095 1184 aa12.73□□□□□ -0.37
TTR-201ENST00000237014 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
TTR-201ENST00000237014 ERICH3Q5RHP9 1530 aa12.72□□□□□ -0.37
TTR-201ENST00000237014 GRIN2AQ12879 1464 aa12.69□□□□□ -0.38
TTR-201ENST00000237014 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
TTR-201ENST00000237014 FHAD1B1AJZ9 1412 aa12.67□□□□□ -0.38
TTR-201ENST00000237014 CEP170Q5SW79 1584 aa12.66□□□□□ -0.38
TTR-201ENST00000237014 NUP160Q12769 1436 aa12.64□□□□□ -0.39
TTR-201ENST00000237014 ARAP1Q96P48 1450 aa12.63□□□□□ -0.39
TTR-201ENST00000237014 KIF27Q86VH2 1401 aa12.62□□□□□ -0.39
TTR-201ENST00000237014 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
TTR-201ENST00000237014 IGF1RP08069 1367 aa12.6□□□□□ -0.39
TTR-201ENST00000237014 CUL7Q14999 1698 aa12.6□□□□□ -0.39
TTR-201ENST00000237014 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
TTR-201ENST00000237014 SHROOM2Q13796 1616 aa12.59□□□□□ -0.39
TTR-201ENST00000237014 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
TTR-201ENST00000237014 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
TTR-201ENST00000237014 EVX2Q03828 476 aa12.58□□□□□ -0.4
TTR-201ENST00000237014 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
TTR-201ENST00000237014 ERCC6L2Q5T890 1561 aa12.58□□□□□ -0.4
TTR-201ENST00000237014 RUSC2Q8N2Y8 1516 aa12.57□□□□□ -0.4
TTR-201ENST00000237014 CYB5RLQ6IPT4 315 aa12.52□□□□□ -0.41
TTR-201ENST00000237014 CARMIL1Q5VZK9 1371 aa12.51□□□□□ -0.41
TTR-201ENST00000237014 ZBTB22O15209 634 aa12.49□□□□□ -0.41
TTR-201ENST00000237014 KIAA0586Q9BVV6 1533 aa12.47□□□□□ -0.41
TTR-201ENST00000237014 PRG4Q92954 1404 aaPredicted RBP12.46□□□□□ -0.41
TTR-201ENST00000237014 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
TTR-201ENST00000237014 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
TTR-201ENST00000237014 RAPGEF2Q9Y4G8 1499 aa12.44□□□□□ -0.42
TTR-201ENST00000237014 JPH4Q96JJ6 628 aa12.43□□□□□ -0.42
TTR-201ENST00000237014 C19orf67A6NJJ6 358 aa12.42□□□□□ -0.42
TTR-201ENST00000237014 IQGAP2Q13576 1575 aa12.42□□□□□ -0.42
TTR-201ENST00000237014 PRXQ9BXM0 1461 aa12.41□□□□□ -0.42
TTR-201ENST00000237014 CTTNBP2Q8WZ74 1663 aa12.38□□□□□ -0.43
TTR-201ENST00000237014 SSUH2Q9Y2M2 353 aa12.37□□□□□ -0.43
TTR-201ENST00000237014 DISP1Q96F81 1524 aa12.36□□□□□ -0.43
TTR-201ENST00000237014 UGGT2Q9NYU1 1516 aa12.35□□□□□ -0.43
TTR-201ENST00000237014 ADCY10Q96PN6 1610 aa12.34□□□□□ -0.43
TTR-201ENST00000237014 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
TTR-201ENST00000237014 MKRN4PQ13434 485 aaPredicted RBP12.33□□□□□ -0.44
TTR-201ENST00000237014 EEA1Q15075 1411 aa12.33□□□□□ -0.44
TTR-201ENST00000237014 KIAA0556O60303 1618 aa12.32□□□□□ -0.44
TTR-201ENST00000237014 GABBR2O75899 941 aa12.3□□□□□ -0.44
TTR-201ENST00000237014 CSRNP3Q8WYN3 585 aa12.3□□□□□ -0.44
TTR-201ENST00000237014 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
TTR-201ENST00000237014 CARMIL2Q6F5E8 1435 aa12.29□□□□□ -0.44
TTR-201ENST00000237014 TNIKQ9UKE5 1360 aa12.29□□□□□ -0.44
TTR-201ENST00000237014 PTPRGP23470 1445 aa12.28□□□□□ -0.44
TTR-201ENST00000237014 KIF21BO75037 1637 aa12.27□□□□□ -0.44
TTR-201ENST00000237014 FAM9AQ8IZU1 332 aaPredicted RBP12.25□□□□□ -0.45
TTR-201ENST00000237014 MAPKBP1O60336 1514 aa12.25□□□□□ -0.45
TTR-201ENST00000237014 KIF13AQ9H1H9 1805 aa12.25□□□□□ -0.45
TTR-201ENST00000237014 LHX8Q68G74 356 aa12.23□□□□□ -0.45
TTR-201ENST00000237014 SAMD9Q5K651 1589 aa12.22□□□□□ -0.45
TTR-201ENST00000237014 ABCC2Q92887 1545 aa12.22□□□□□ -0.45
TTR-201ENST00000237014 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
TTR-201ENST00000237014 TTBK1Q5TCY1 1321 aaPredicted RBP12.22□□□□□ -0.45
TTR-201ENST00000237014 GOLGA3Q08378 1498 aa12.21□□□□□ -0.45
TTR-201ENST00000237014 UACAQ9BZF9 1416 aa12.21□□□□□ -0.45
TTR-201ENST00000237014 DIP2BQ9P265 1576 aa12.21□□□□□ -0.46
TTR-201ENST00000237014 ABCA8O94911 1581 aa12.19□□□□□ -0.46
TTR-201ENST00000237014 ABCC10Q5T3U5 1492 aa12.19□□□□□ -0.46
TTR-201ENST00000237014 PLB1Q6P1J6 1458 aa12.19□□□□□ -0.46
TTR-201ENST00000237014 KDM5BQ9UGL1 1544 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms