RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 SETD5Q9C0A6 1442 aa24.4■■□□□ 1.5
H2AFV-201ENST00000222690 CARMIL1Q5VZK9 1371 aa24.37■■□□□ 1.49
H2AFV-201ENST00000222690 IGF1RP08069 1367 aa24.35■■□□□ 1.49
H2AFV-201ENST00000222690 PHLDB1Q86UU1 1377 aa24.35■■□□□ 1.49
H2AFV-201ENST00000222690 ANP32CO43423 234 aa24.35■■□□□ 1.49
H2AFV-201ENST00000222690 NCAPD3P42695 1498 aa24.29■■□□□ 1.48
H2AFV-201ENST00000222690 MAPKBP1O60336 1514 aa24.28■■□□□ 1.48
H2AFV-201ENST00000222690 WDR97A6NE52 1622 aa24.26■■□□□ 1.47
H2AFV-201ENST00000222690 CFTRP13569 1480 aa24.26■■□□□ 1.47
H2AFV-201ENST00000222690 LRRC9Q6ZRR7 1453 aa24.23■■□□□ 1.47
H2AFV-201ENST00000222690 TONSLQ96HA7 1378 aa24.21■■□□□ 1.47
H2AFV-201ENST00000222690 ANP32EQ9BTT0 268 aa24.21■■□□□ 1.47
H2AFV-201ENST00000222690 TIAM1Q13009 1591 aa24.21■■□□□ 1.47
H2AFV-201ENST00000222690 PPP1R15AO75807 674 aaPredicted RBP24.2■■□□□ 1.46
H2AFV-201ENST00000222690 FHOD3Q2V2M9 1422 aa24.19■■□□□ 1.46
H2AFV-201ENST00000222690 FHAD1B1AJZ9 1412 aa24.16■■□□□ 1.46
H2AFV-201ENST00000222690 HMGXB3Q12766 1538 aa24.16■■□□□ 1.46
H2AFV-201ENST00000222690 IRX6P78412 446 aaPredicted RBP24.14■■□□□ 1.45
H2AFV-201ENST00000222690 FGD5Q6ZNL6 1462 aa24.14■■□□□ 1.45
H2AFV-201ENST00000222690 HNRNPUQ00839 825 aaKnown RBP eCLIP24.1■■□□□ 1.45
H2AFV-201ENST00000222690 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
H2AFV-201ENST00000222690 MTUS2Q5JR59 1369 aa24.08■■□□□ 1.44
H2AFV-201ENST00000222690 CHIC2Q9UKJ5 165 aa24.07■■□□□ 1.44
H2AFV-201ENST00000222690 TIMELESSQ9UNS1 1208 aa24.06■■□□□ 1.44
H2AFV-201ENST00000222690 RBM19Q9Y4C8 960 aaKnown RBP24.06■■□□□ 1.44
H2AFV-201ENST00000222690 CCER2I3L3R5 266 aa24.05■■□□□ 1.44
H2AFV-201ENST00000222690 ARID3CA6NKF2 412 aa24.02■■□□□ 1.44
H2AFV-201ENST00000222690 RRP7BPQ9NSQ0 103 aa24.01■■□□□ 1.43
H2AFV-201ENST00000222690 PCF11O94913 1555 aaKnown RBP24.01■■□□□ 1.43
H2AFV-201ENST00000222690 CNGB1Q14028 1251 aaPredicted RBP24.01■■□□□ 1.43
H2AFV-201ENST00000222690 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
H2AFV-201ENST00000222690 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
H2AFV-201ENST00000222690 CCDC18Q5T9S5 1454 aa23.92■■□□□ 1.42
H2AFV-201ENST00000222690 FGD6Q6ZV73 1430 aa23.9■■□□□ 1.42
H2AFV-201ENST00000222690 FANCD2Q9BXW9 1451 aa23.88■■□□□ 1.41
H2AFV-201ENST00000222690 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
H2AFV-201ENST00000222690 FAM9BQ8IZU0 186 aa23.87■■□□□ 1.41
H2AFV-201ENST00000222690 CDK11AQ9UQ88 783 aaPredicted RBP23.86■■□□□ 1.41
H2AFV-201ENST00000222690 CASKIN1Q8WXD9 1431 aa23.85■■□□□ 1.41
H2AFV-201ENST00000222690 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
H2AFV-201ENST00000222690 FOXD1Q16676 465 aa23.84■■□□□ 1.41
H2AFV-201ENST00000222690 FYCO1Q9BQS8 1478 aa23.84■■□□□ 1.41
H2AFV-201ENST00000222690 TDRD9Q8NDG6 1382 aaKnown RBP23.83■■□□□ 1.4
H2AFV-201ENST00000222690 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
H2AFV-201ENST00000222690 PTPRKQ15262 1439 aa23.82■■□□□ 1.4
H2AFV-201ENST00000222690 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
H2AFV-201ENST00000222690 UACAQ9BZF9 1416 aa23.79■■□□□ 1.4
H2AFV-201ENST00000222690 EIF4G2P78344 907 aaKnown RBP eCLIP23.79■■□□□ 1.4
H2AFV-201ENST00000222690 CFAP43Q8NDM7 1665 aa23.77■■□□□ 1.4
H2AFV-201ENST00000222690 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
H2AFV-201ENST00000222690 POLA1P09884 1462 aaPredicted RBP23.74■■□□□ 1.39
H2AFV-201ENST00000222690 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
H2AFV-201ENST00000222690 CCDC184Q52MB2 194 aa23.74■■□□□ 1.39
H2AFV-201ENST00000222690 SENP3-EIF4A1A0A087X0R7 540 aa23.74■■□□□ 1.39
H2AFV-201ENST00000222690 MRS2Q9HD23 443 aa23.74■■□□□ 1.39
H2AFV-201ENST00000222690 NESP48681 1621 aa23.73■■□□□ 1.39
H2AFV-201ENST00000222690 NAIPQ13075 1403 aa23.72■■□□□ 1.39
H2AFV-201ENST00000222690 AQRO60306 1485 aaKnown RBP eCLIP23.72■■□□□ 1.392e-7■■■■■ 32.8
H2AFV-201ENST00000222690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.72■■□□□ 1.391e-30■■■□□ 14.6
H2AFV-201ENST00000222690 NCOA2Q15596 1464 aa23.71■■□□□ 1.39
H2AFV-201ENST00000222690 BCL11AQ9H165 835 aa23.71■■□□□ 1.39
H2AFV-201ENST00000222690 MYOM3Q5VTT5 1437 aa23.69■■□□□ 1.38
H2AFV-201ENST00000222690 L3MBTL2Q969R5 705 aa23.69■■□□□ 1.38
H2AFV-201ENST00000222690 EFCAB5A4FU69 1503 aa23.68■■□□□ 1.38
H2AFV-201ENST00000222690 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
H2AFV-201ENST00000222690 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
H2AFV-201ENST00000222690 MSH5O43196 834 aa23.67■■□□□ 1.38
H2AFV-201ENST00000222690 B4GALNT3Q6L9W6 998 aa23.67■■□□□ 1.38
H2AFV-201ENST00000222690 MPHOSPH9Q99550 1183 aa23.65■■□□□ 1.38
H2AFV-201ENST00000222690 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
H2AFV-201ENST00000222690 PTPN23Q9H3S7 1636 aa23.64■■□□□ 1.38
H2AFV-201ENST00000222690 PRDM2Q13029 1718 aa23.63■■□□□ 1.37
H2AFV-201ENST00000222690 C11orf95C9JLR9 678 aaPredicted RBP23.61■■□□□ 1.37
H2AFV-201ENST00000222690 DNMBPQ6XZF7 1577 aa23.59■■□□□ 1.37
H2AFV-201ENST00000222690 SNAPC4Q5SXM2 1469 aa23.59■■□□□ 1.37
H2AFV-201ENST00000222690 PPP4R2Q9NY27 417 aa23.58■■□□□ 1.37
H2AFV-201ENST00000222690 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
H2AFV-201ENST00000222690 CC2D2AQ9P2K1 1620 aa23.57■■□□□ 1.36
H2AFV-201ENST00000222690 SLC4A1APQ9BWU0 796 aaKnown RBP23.56■■□□□ 1.36
H2AFV-201ENST00000222690 GAPVD1Q14C86 1478 aa23.51■■□□□ 1.35
H2AFV-201ENST00000222690 NBPF8Q3BBV2 869 aa23.5■■□□□ 1.35
H2AFV-201ENST00000222690 CNTLNQ9NXG0 1405 aa23.49■■□□□ 1.35
H2AFV-201ENST00000222690 ZNF777Q9ULD5 760 aaPredicted RBP23.48■■□□□ 1.35
H2AFV-201ENST00000222690 CUL7Q14999 1698 aa23.48■■□□□ 1.35
H2AFV-201ENST00000222690 CTTNBP2Q8WZ74 1663 aa23.48■■□□□ 1.35
H2AFV-201ENST00000222690 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
H2AFV-201ENST00000222690 SUPT6HQ7KZ85 1726 aaKnown RBP23.46■■□□□ 1.35
H2AFV-201ENST00000222690 ZNF644Q9H582 1327 aaPredicted RBP23.46■■□□□ 1.35
H2AFV-201ENST00000222690 FANCIQ9NVI1 1328 aa23.45■■□□□ 1.35
H2AFV-201ENST00000222690 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
H2AFV-201ENST00000222690 EHBP1L1Q8N3D4 1523 aa23.43■■□□□ 1.34
H2AFV-201ENST00000222690 KIF7Q2M1P5 1343 aa23.42■■□□□ 1.34
H2AFV-201ENST00000222690 URB2Q14146 1524 aaKnown RBP23.42■■□□□ 1.34
H2AFV-201ENST00000222690 DNAJC5BQ9UF47 199 aa23.41■■□□□ 1.34
H2AFV-201ENST00000222690 KDM5BQ9UGL1 1544 aa23.4■■□□□ 1.34
H2AFV-201ENST00000222690 ZBED9Q6R2W3 1325 aa23.39■■□□□ 1.34
H2AFV-201ENST00000222690 NBR1Q14596 966 aa23.39■■□□□ 1.33
H2AFV-201ENST00000222690 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
H2AFV-201ENST00000222690 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
H2AFV-201ENST00000222690 CCDC136Q96JN2 1154 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms