RNA–Protein interactions for RNA: ENST00000219439.8

HSDL1-201, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSDL1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-201ENST00000219439 TOPBP1Q92547 1522 aa21.7■■□□□ 1.06
HSDL1-201ENST00000219439 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
HSDL1-201ENST00000219439 RAD54L2Q9Y4B4 1467 aa21.67■■□□□ 1.06
HSDL1-201ENST00000219439 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
HSDL1-201ENST00000219439 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
HSDL1-201ENST00000219439 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
HSDL1-201ENST00000219439 RAB3GAP2Q9H2M9 1393 aa21.65■■□□□ 1.06
HSDL1-201ENST00000219439 FAM50AQ14320 339 aaKnown RBP21.64■■□□□ 1.05
HSDL1-201ENST00000219439 POLA1P09884 1462 aaPredicted RBP21.62■■□□□ 1.05
HSDL1-201ENST00000219439 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
HSDL1-201ENST00000219439 ERCC6Q03468 1493 aa21.58■■□□□ 1.05
HSDL1-201ENST00000219439 LRRC9Q6ZRR7 1453 aa21.56■■□□□ 1.04
HSDL1-201ENST00000219439 PHLDB1Q86UU1 1377 aa21.56■■□□□ 1.04
HSDL1-201ENST00000219439 SETD5Q9C0A6 1442 aa21.54■■□□□ 1.04
HSDL1-201ENST00000219439 TDRD9Q8NDG6 1382 aaKnown RBP21.54■■□□□ 1.04
HSDL1-201ENST00000219439 FHAD1B1AJZ9 1412 aa21.53■■□□□ 1.04
HSDL1-201ENST00000219439 MAP3K1Q13233 1512 aa21.52■■□□□ 1.03
HSDL1-201ENST00000219439 MAPKBP1O60336 1514 aa21.5■■□□□ 1.03
HSDL1-201ENST00000219439 SIN3AQ96ST3 1273 aa21.5■■□□□ 1.03
HSDL1-201ENST00000219439 MRC2Q9UBG0 1479 aa21.48■■□□□ 1.03
HSDL1-201ENST00000219439 FHOD3Q2V2M9 1422 aa21.48■■□□□ 1.03
HSDL1-201ENST00000219439 ABCA10Q8WWZ4 1543 aa21.46■■□□□ 1.03
HSDL1-201ENST00000219439 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
HSDL1-201ENST00000219439 KCNH8Q96L42 1107 aa21.42■■□□□ 1.02
HSDL1-201ENST00000219439 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
HSDL1-201ENST00000219439 DDX10Q13206 875 aaKnown RBP21.39■■□□□ 1.02
HSDL1-201ENST00000219439 CFAP43Q8NDM7 1665 aa21.38■■□□□ 1.01
HSDL1-201ENST00000219439 WDR97A6NE52 1622 aa21.36■■□□□ 1.01
HSDL1-201ENST00000219439 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
HSDL1-201ENST00000219439 HIRIP3Q9BW71 556 aaPredicted RBP21.35■■□□□ 1.01
HSDL1-201ENST00000219439 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.015e-6■■□□□ 14.3
HSDL1-201ENST00000219439 FYCO1Q9BQS8 1478 aa21.33■■□□□ 1.01
HSDL1-201ENST00000219439 CASKIN1Q8WXD9 1431 aa21.31■■□□□ 1
HSDL1-201ENST00000219439 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
HSDL1-201ENST00000219439 WDR62O43379 1518 aa21.27■■□□□ 1
HSDL1-201ENST00000219439 MTUS2Q5JR59 1369 aa21.27■■□□□ 1
HSDL1-201ENST00000219439 TARBP1Q13395 1621 aaKnown RBP21.27■■□□□ 1
HSDL1-201ENST00000219439 FMN1Q68DA7 1419 aa21.25■□□□□ 0.99
HSDL1-201ENST00000219439 ZNF608Q9ULD9 1512 aaPredicted RBP21.24■□□□□ 0.99
HSDL1-201ENST00000219439 MYT1Q01538 1121 aa21.24■□□□□ 0.99
HSDL1-201ENST00000219439 PPP1R15AO75807 674 aaPredicted RBP21.24■□□□□ 0.99
HSDL1-201ENST00000219439 TIMELESSQ9UNS1 1208 aa21.24■□□□□ 0.99
HSDL1-201ENST00000219439 CUL7Q14999 1698 aa21.23■□□□□ 0.99
HSDL1-201ENST00000219439 FGD6Q6ZV73 1430 aa21.23■□□□□ 0.99
HSDL1-201ENST00000219439 IFT140Q96RY7 1462 aa21.22■□□□□ 0.99
HSDL1-201ENST00000219439 ABCA5Q8WWZ7 1642 aa21.22■□□□□ 0.99
HSDL1-201ENST00000219439 CTTNBP2Q8WZ74 1663 aa21.21■□□□□ 0.99
HSDL1-201ENST00000219439 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
HSDL1-201ENST00000219439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.2■□□□□ 0.98
HSDL1-201ENST00000219439 BCANQ96GW7 911 aa21.18■□□□□ 0.98
HSDL1-201ENST00000219439 THOC2Q8NI27 1593 aaKnown RBP21.18■□□□□ 0.98
HSDL1-201ENST00000219439 CCDC18Q5T9S5 1454 aa21.17■□□□□ 0.98
HSDL1-201ENST00000219439 FBLN2P98095 1184 aa21.17■□□□□ 0.98
HSDL1-201ENST00000219439 ANP32CO43423 234 aa21.16■□□□□ 0.98
HSDL1-201ENST00000219439 SNAPC4Q5SXM2 1469 aa21.15■□□□□ 0.98
HSDL1-201ENST00000219439 PTPRKQ15262 1439 aa21.13■□□□□ 0.97
HSDL1-201ENST00000219439 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
HSDL1-201ENST00000219439 FKBP8Q14318 412 aa21.11■□□□□ 0.97
HSDL1-201ENST00000219439 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
HSDL1-201ENST00000219439 NCOA2Q15596 1464 aa21.1■□□□□ 0.97
HSDL1-201ENST00000219439 HFM1A2PYH4 1435 aa21.09■□□□□ 0.97
HSDL1-201ENST00000219439 UACAQ9BZF9 1416 aa21.08■□□□□ 0.97
HSDL1-201ENST00000219439 PBRM1Q86U86 1689 aa21.08■□□□□ 0.96
HSDL1-201ENST00000219439 MYOM3Q5VTT5 1437 aa21.07■□□□□ 0.96
HSDL1-201ENST00000219439 TSHZ2Q9NRE2 1034 aa21.07■□□□□ 0.96
HSDL1-201ENST00000219439 CHIC2Q9UKJ5 165 aa21.07■□□□□ 0.96
HSDL1-201ENST00000219439 CHMP7Q8WUX9 453 aaPredicted RBP21.06■□□□□ 0.96
HSDL1-201ENST00000219439 RRP7BPQ9NSQ0 103 aa21.06■□□□□ 0.96
HSDL1-201ENST00000219439 PTPN23Q9H3S7 1636 aa21.05■□□□□ 0.96
HSDL1-201ENST00000219439 NAIPQ13075 1403 aa21.04■□□□□ 0.96
HSDL1-201ENST00000219439 CCER2I3L3R5 266 aa21.04■□□□□ 0.96
HSDL1-201ENST00000219439 EIF4G3O43432 1585 aaKnown RBP21.04■□□□□ 0.96
HSDL1-201ENST00000219439 SAMD9Q5K651 1589 aa21.04■□□□□ 0.96
HSDL1-201ENST00000219439 NEFLP07196 543 aa21.03■□□□□ 0.96
HSDL1-201ENST00000219439 ARID3CA6NKF2 412 aa21.02■□□□□ 0.96
HSDL1-201ENST00000219439 LRRIQ1Q96JM4 1722 aa21.01■□□□□ 0.95
HSDL1-201ENST00000219439 SUPT6HQ7KZ85 1726 aaKnown RBP21■□□□□ 0.95
HSDL1-201ENST00000219439 EHBP1L1Q8N3D4 1523 aa20.98■□□□□ 0.95
HSDL1-201ENST00000219439 ADAMTS12P58397 1594 aa20.98■□□□□ 0.95
HSDL1-201ENST00000219439 MAGI3Q5TCQ9 1506 aa20.92■□□□□ 0.94
HSDL1-201ENST00000219439 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
HSDL1-201ENST00000219439 HSPA5P11021 654 aaKnown RBP20.87■□□□□ 0.93
HSDL1-201ENST00000219439 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
HSDL1-201ENST00000219439 MAGI1Q96QZ7 1491 aaPredicted RBP20.87■□□□□ 0.93
HSDL1-201ENST00000219439 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
HSDL1-201ENST00000219439 FOXD1Q16676 465 aa20.86■□□□□ 0.93
HSDL1-201ENST00000219439 SYNJ2O15056 1496 aa20.84■□□□□ 0.93
HSDL1-201ENST00000219439 HECW1Q76N89 1606 aa20.84■□□□□ 0.93
HSDL1-201ENST00000219439 CDK13Q14004 1512 aaKnown RBP20.84■□□□□ 0.93
HSDL1-201ENST00000219439 ARHGEF11O15085 1522 aa20.84■□□□□ 0.93
HSDL1-201ENST00000219439 MPHOSPH9Q99550 1183 aa20.83■□□□□ 0.93
HSDL1-201ENST00000219439 EPRSP07814 1512 aaKnown RBP20.83■□□□□ 0.93
HSDL1-201ENST00000219439 IQGAP2Q13576 1575 aa20.83■□□□□ 0.93
HSDL1-201ENST00000219439 KDM5BQ9UGL1 1544 aa20.82■□□□□ 0.92
HSDL1-201ENST00000219439 WASHC2AQ641Q2 1341 aa20.82■□□□□ 0.92
HSDL1-201ENST00000219439 EIF4G2P78344 907 aaKnown RBP eCLIP20.82■□□□□ 0.92
HSDL1-201ENST00000219439 TCOF1Q13428 1488 aaKnown RBP20.81■□□□□ 0.92
HSDL1-201ENST00000219439 KDM6BO15054 1643 aa20.79■□□□□ 0.92
HSDL1-201ENST00000219439 L3MBTL2Q969R5 705 aa20.79■□□□□ 0.92
HSDL1-201ENST00000219439 KIAA0586Q9BVV6 1533 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms