RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 TTBK1Q5TCY1 1321 aaPredicted RBP16.48■□□□□ 0.23
APOBEC3D-201ENST00000216099 FGD5Q6ZNL6 1462 aa16.47■□□□□ 0.23
APOBEC3D-201ENST00000216099 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
APOBEC3D-201ENST00000216099 NESP48681 1621 aa16.43■□□□□ 0.22
APOBEC3D-201ENST00000216099 CLIP1P30622 1438 aa16.43■□□□□ 0.22
APOBEC3D-201ENST00000216099 TMEM132AQ24JP5 1023 aa16.43■□□□□ 0.22
APOBEC3D-201ENST00000216099 TOPBP1Q92547 1522 aa16.41■□□□□ 0.22
APOBEC3D-201ENST00000216099 CUX2O14529 1486 aa16.4■□□□□ 0.22
APOBEC3D-201ENST00000216099 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
APOBEC3D-201ENST00000216099 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
APOBEC3D-201ENST00000216099 KIF21AQ7Z4S6 1674 aa16.37■□□□□ 0.21
APOBEC3D-201ENST00000216099 VPS8Q8N3P4 1428 aa16.36■□□□□ 0.21
APOBEC3D-201ENST00000216099 ABCA10Q8WWZ4 1543 aa16.36■□□□□ 0.21
APOBEC3D-201ENST00000216099 PDS5BQ9NTI5 1447 aa16.35■□□□□ 0.21
APOBEC3D-201ENST00000216099 POLA1P09884 1462 aaPredicted RBP16.34■□□□□ 0.21
APOBEC3D-201ENST00000216099 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
APOBEC3D-201ENST00000216099 IGF1RP08069 1367 aa16.32■□□□□ 0.2
APOBEC3D-201ENST00000216099 CUL7Q14999 1698 aa16.31■□□□□ 0.2
APOBEC3D-201ENST00000216099 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
APOBEC3D-201ENST00000216099 ARAP1Q96P48 1450 aa16.27■□□□□ 0.2
APOBEC3D-201ENST00000216099 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
APOBEC3D-201ENST00000216099 FOXD4L1Q9NU39 408 aa16.25■□□□□ 0.19
APOBEC3D-201ENST00000216099 RAD54L2Q9Y4B4 1467 aa16.25■□□□□ 0.19
APOBEC3D-201ENST00000216099 CARMIL1Q5VZK9 1371 aa16.24■□□□□ 0.19
APOBEC3D-201ENST00000216099 PPARGC1BQ86YN6 1023 aaKnown RBP16.23■□□□□ 0.19
APOBEC3D-201ENST00000216099 CTTNBP2Q8WZ74 1663 aa16.22■□□□□ 0.19
APOBEC3D-201ENST00000216099 ZEB1P37275 1124 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3D-201ENST00000216099 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
APOBEC3D-201ENST00000216099 DNAJC5BQ9UF47 199 aa16.2■□□□□ 0.18
APOBEC3D-201ENST00000216099 NPM2Q86SE8 214 aaKnown RBP16.19■□□□□ 0.18
APOBEC3D-201ENST00000216099 ARHGAP35Q9NRY4 1499 aa16.19■□□□□ 0.18
APOBEC3D-201ENST00000216099 MRC2Q9UBG0 1479 aa16.15■□□□□ 0.18
APOBEC3D-201ENST00000216099 ERICH6Q7L0X2 663 aa16.15■□□□□ 0.18
APOBEC3D-201ENST00000216099 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
APOBEC3D-201ENST00000216099 GAPVD1Q14C86 1478 aa16.11■□□□□ 0.17
APOBEC3D-201ENST00000216099 EFCAB5A4FU69 1503 aa16.11■□□□□ 0.17
APOBEC3D-201ENST00000216099 MAP3K1Q13233 1512 aa16.1■□□□□ 0.17
APOBEC3D-201ENST00000216099 WDR62O43379 1518 aa16.09■□□□□ 0.17
APOBEC3D-201ENST00000216099 CFAP43Q8NDM7 1665 aa16.05■□□□□ 0.16
APOBEC3D-201ENST00000216099 TIAM1Q13009 1591 aa16.02■□□□□ 0.16
APOBEC3D-201ENST00000216099 TDRD9Q8NDG6 1382 aaKnown RBP16.02■□□□□ 0.16
APOBEC3D-201ENST00000216099 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.15
APOBEC3D-201ENST00000216099 SAMD9Q5K651 1589 aa16.01■□□□□ 0.15
APOBEC3D-201ENST00000216099 ADAMTS12P58397 1594 aa16.01■□□□□ 0.15
APOBEC3D-201ENST00000216099 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
APOBEC3D-201ENST00000216099 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
APOBEC3D-201ENST00000216099 AQRO60306 1485 aaKnown RBP eCLIP15.99■□□□□ 0.15
APOBEC3D-201ENST00000216099 PCF11O94913 1555 aaKnown RBP15.99■□□□□ 0.15
APOBEC3D-201ENST00000216099 FYCO1Q9BQS8 1478 aa15.96■□□□□ 0.15
APOBEC3D-201ENST00000216099 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
APOBEC3D-201ENST00000216099 RRBP1Q9P2E9 1410 aaKnown RBP15.94■□□□□ 0.14
APOBEC3D-201ENST00000216099 CASKIN1Q8WXD9 1431 aa15.92■□□□□ 0.14
APOBEC3D-201ENST00000216099 KANK4Q5T7N3 995 aaPredicted RBP15.91■□□□□ 0.14
APOBEC3D-201ENST00000216099 CCER1Q8TC90 406 aaPredicted RBP15.91■□□□□ 0.14
APOBEC3D-201ENST00000216099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.91■□□□□ 0.14
APOBEC3D-201ENST00000216099 EIF4G3O43432 1585 aaKnown RBP15.9■□□□□ 0.14
APOBEC3D-201ENST00000216099 ERCC6Q03468 1493 aa15.9■□□□□ 0.14
APOBEC3D-201ENST00000216099 FHOD3Q2V2M9 1422 aa15.9■□□□□ 0.14
APOBEC3D-201ENST00000216099 FMN1Q68DA7 1419 aa15.9■□□□□ 0.14
APOBEC3D-201ENST00000216099 LRRC9Q6ZRR7 1453 aa15.9■□□□□ 0.14
APOBEC3D-201ENST00000216099 CFAP44Q96MT7 982 aa15.9■□□□□ 0.14
APOBEC3D-201ENST00000216099 PAXIP1Q6ZW49 1069 aaPredicted RBP15.89■□□□□ 0.13
APOBEC3D-201ENST00000216099 IQGAP2Q13576 1575 aa15.88■□□□□ 0.13
APOBEC3D-201ENST00000216099 TSHZ2Q9NRE2 1034 aa15.88■□□□□ 0.13
APOBEC3D-201ENST00000216099 SNAPC4Q5SXM2 1469 aa15.87■□□□□ 0.13
APOBEC3D-201ENST00000216099 LRRIQ1Q96JM4 1722 aa15.86■□□□□ 0.13
APOBEC3D-201ENST00000216099 ZNF608Q9ULD9 1512 aaPredicted RBP15.86■□□□□ 0.13
APOBEC3D-201ENST00000216099 EIF5BO60841 1220 aaKnown RBP15.82■□□□□ 0.12
APOBEC3D-201ENST00000216099 CCNB3Q8WWL7 1395 aa15.82■□□□□ 0.12
APOBEC3D-201ENST00000216099 NPM1P06748 294 aaKnown RBP eCLIP15.82■□□□□ 0.12
APOBEC3D-201ENST00000216099 UGGT2Q9NYU1 1516 aa15.81■□□□□ 0.12
APOBEC3D-201ENST00000216099 MAGI1Q96QZ7 1491 aaPredicted RBP15.81■□□□□ 0.12
APOBEC3D-201ENST00000216099 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
APOBEC3D-201ENST00000216099 P3H3Q8IVL6 736 aa15.78■□□□□ 0.12
APOBEC3D-201ENST00000216099 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
APOBEC3D-201ENST00000216099 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
APOBEC3D-201ENST00000216099 KIAA0586Q9BVV6 1533 aa15.76■□□□□ 0.11
APOBEC3D-201ENST00000216099 CCDC18Q5T9S5 1454 aa15.74■□□□□ 0.11
APOBEC3D-201ENST00000216099 PKD2Q13563 968 aa15.74■□□□□ 0.11
APOBEC3D-201ENST00000216099 SUPT6HQ7KZ85 1726 aaKnown RBP15.73■□□□□ 0.11
APOBEC3D-201ENST00000216099 EHBP1L1Q8N3D4 1523 aa15.73■□□□□ 0.11
APOBEC3D-201ENST00000216099 KIAA0556O60303 1618 aa15.72■□□□□ 0.11
APOBEC3D-201ENST00000216099 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.72■□□□□ 0.11
APOBEC3D-201ENST00000216099 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
APOBEC3D-201ENST00000216099 PHLDB1Q86UU1 1377 aa15.72■□□□□ 0.11
APOBEC3D-201ENST00000216099 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
APOBEC3D-201ENST00000216099 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
APOBEC3D-201ENST00000216099 CEP170Q5SW79 1584 aa15.68■□□□□ 0.1
APOBEC3D-201ENST00000216099 PLEKHG5O94827 1062 aa15.68■□□□□ 0.1
APOBEC3D-201ENST00000216099 DISP1Q96F81 1524 aa15.67■□□□□ 0.1
APOBEC3D-201ENST00000216099 ARHGEF11O15085 1522 aa15.66■□□□□ 0.1
APOBEC3D-201ENST00000216099 DHX57Q6P158 1386 aaKnown RBP15.64■□□□□ 0.09
APOBEC3D-201ENST00000216099 NUP160Q12769 1436 aa15.64■□□□□ 0.09
APOBEC3D-201ENST00000216099 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.09
APOBEC3D-201ENST00000216099 NBR1Q14596 966 aa15.64■□□□□ 0.09
APOBEC3D-201ENST00000216099 ATP1B4Q9UN42 357 aaPredicted RBP15.64■□□□□ 0.09
APOBEC3D-201ENST00000216099 EPRSP07814 1512 aaKnown RBP15.63■□□□□ 0.09
APOBEC3D-201ENST00000216099 FGD6Q6ZV73 1430 aa15.63■□□□□ 0.09
APOBEC3D-201ENST00000216099 RAPGEF6Q8TEU7 1601 aa15.63■□□□□ 0.09
APOBEC3D-201ENST00000216099 NCOA2Q15596 1464 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms