RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Ythdc1E9Q5K9 736 aaKnown RBP22,79■■□□□ 1,24
Ptpre-207ENSMUST00000211140 Vsig10D3YX43 558 aa22,77■■□□□ 1,24
Ptpre-207ENSMUST00000211140 Lmod3E9QA62 571 aa22,75■■□□□ 1,23
Ptpre-207ENSMUST00000211140 1700123L14RikQ3V2K7 440 aa22,74■■□□□ 1,23
Ptpre-207ENSMUST00000211140 CanxP35564 591 aaKnown RBP22,72■■□□□ 1,23
Ptpre-207ENSMUST00000211140 Fam71e1A1L3C1 212 aa22,71■■□□□ 1,23
Ptpre-207ENSMUST00000211140 Aebp2Q9Z248 504 aaKnown RBP22,69■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Hsp90ab1P11499 724 aaKnown RBP22,68■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Rb1cc1Q9ESK9 1588 aa22,68■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Clstn2Q9ER65 966 aa22,66■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Trim44Q9QXA7 346 aa22,66■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Trim26Q99PN3 545 aa22,65■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Fgd1P52734 960 aa22,65■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Trim30dE9PWL0 497 aa22,64■■□□□ 1,22
Ptpre-207ENSMUST00000211140 Plppr3Q7TPB0 716 aa22,6■■□□□ 1,21
Ptpre-207ENSMUST00000211140 Ofd1Q80Z25 1017 aa22,6■■□□□ 1,21
Ptpre-207ENSMUST00000211140 Setd5Q5XJV7 1441 aa22,6■■□□□ 1,21
Ptpre-207ENSMUST00000211140 P3h3Q8CG70 732 aa22,59■■□□□ 1,21
Ptpre-207ENSMUST00000211140 Rgl3Q3UYI5 709 aa22,59■■□□□ 1,21
Ptpre-207ENSMUST00000211140 Ubl4bQ9CQ84 188 aa22,59■■□□□ 1,21
Ptpre-207ENSMUST00000211140 Arid4bA2CG63 1314 aaKnown RBP22,49■■□□□ 1,19
Ptpre-207ENSMUST00000211140 Ccdc27Q3V036 639 aa22,46■■□□□ 1,19
Ptpre-207ENSMUST00000211140 PtmaP26350 111 aa22,46■■□□□ 1,19
Ptpre-207ENSMUST00000211140 Apbb1Q9QXJ1 710 aa22,42■■□□□ 1,18
Ptpre-207ENSMUST00000211140 Plcb2A3KGF7 1181 aa22,4■■□□□ 1,18
Ptpre-207ENSMUST00000211140 Htatsf1Q8BGC0 757 aa22,4■■□□□ 1,18
Ptpre-207ENSMUST00000211140 Grwd1Q810D6 446 aaKnown RBP22,37■■□□□ 1,17
Ptpre-207ENSMUST00000211140 Card11Q8CIS0 1159 aa22,34■■□□□ 1,17
Ptpre-207ENSMUST00000211140 Ppm1gQ61074 542 aa22,31■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Kdm2aP59997 1161 aa22,31■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Irx6Q9ER75 438 aa22,31■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Neurod2Q62414 383 aa22,31■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Cwc22Q8C5N3 908 aaKnown RBP22,27■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Safb2Q80YR5 991 aaKnown RBP22,27■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Eea1Q8BL66 1411 aa22,27■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Golga3P55937 1487 aa22,27■■□□□ 1,16
Ptpre-207ENSMUST00000211140 Dbr1Q923B1 550 aa22,27■■□□□ 1,15
Ptpre-207ENSMUST00000211140 IqubQ8CDK3 788 aa22,26■■□□□ 1,15
Ptpre-207ENSMUST00000211140 SafbD3YXK2 937 aaKnown RBP22,26■■□□□ 1,15
Ptpre-207ENSMUST00000211140 Srpk2O54781 681 aaKnown RBP22,22■■□□□ 1,15
Ptpre-207ENSMUST00000211140 Mroh3A0A1D5RM54 893 aa22,21■■□□□ 1,15
Ptpre-207ENSMUST00000211140 Mapk8ip3Q9ESN9 1337 aa22,2■■□□□ 1,14
Ptpre-207ENSMUST00000211140 B4galnt3Q6L8S8 986 aa22,18■■□□□ 1,14
Ptpre-207ENSMUST00000211140 Armcx1Q9CX83 456 aa22,17■■□□□ 1,14
Ptpre-207ENSMUST00000211140 Exosc9Q9JHI7 438 aaKnown RBP22,17■■□□□ 1,14
Ptpre-207ENSMUST00000211140 Gm20521D3Z5F7 333 aa22,16■■□□□ 1,14
Ptpre-207ENSMUST00000211140 Bcl11aQ9QYE3 773 aa22,16■■□□□ 1,14
Ptpre-207ENSMUST00000211140 Spryd3E9Q9B3 442 aa22,15■■□□□ 1,14
Ptpre-207ENSMUST00000211140 Map7O88735 730 aa22,15■■□□□ 1,14
Ptpre-207ENSMUST00000211140 Kif15Q6P9L6 1387 aa22,14■■□□□ 1,13
Ptpre-207ENSMUST00000211140 Gm6268A2A3U9 297 aa22,12■■□□□ 1,13
Ptpre-207ENSMUST00000211140 Irx3P81067 507 aa22,11■■□□□ 1,13
Ptpre-207ENSMUST00000211140 Rsf1E9PWW9 1441 aaKnown RBP22,11■■□□□ 1,13
Ptpre-207ENSMUST00000211140 Slc4a3P16283 1227 aa22,1■■□□□ 1,13
Ptpre-207ENSMUST00000211140 Chmp4bQ9D8B3 224 aaKnown RBP22,08■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Mtus2Q3UHD3 1353 aa22,07■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Casc1Q6TDU8 730 aa22,06■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Mia2Q91ZV0 1396 aa22,06■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Wwc2Q6NXJ0 1187 aa22,04■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Znf326O88291 580 aa22,04■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Baz1aO88379 1555 aa22,04■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Arhgap27A2AB59 869 aa22,03■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Mbd3Q9Z2D8 285 aaKnown RBP22,03■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Rrp7aQ9D1C9 280 aaKnown RBP22,03■■□□□ 1,12
Ptpre-207ENSMUST00000211140 Hspa5P20029 655 aaKnown RBP22,02■■□□□ 1,12
Ptpre-207ENSMUST00000211140 NudcO35685 332 aaKnown RBP22,01■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Ccdc18Q640L5 1455 aa22,01■■□□□ 1,11
Ptpre-207ENSMUST00000211140 NacadQ5SWP3 1504 aa22,01■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Rwdd1Q9CQK7 243 aa22■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Tcerg1Q8CGF7 1100 aaKnown RBP21,99■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Stag3O70576 1240 aa21,99■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Supt16hQ920B9 1047 aa21,98■■□□□ 1,11
Ptpre-207ENSMUST00000211140 PnnO35691 725 aaKnown RBP21,98■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Adam1bQ8R534 806 aa21,97■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Hsp90b1P08113 802 aaKnown RBP21,97■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Stk24Q99KH8 431 aa21,97■■□□□ 1,11
Ptpre-207ENSMUST00000211140 1700019A02RikA0A087WPV9 146 aa21,96■■□□□ 1,11
Ptpre-207ENSMUST00000211140 KnstrnQ9D9Z1 312 aaKnown RBP21,96■■□□□ 1,11
Ptpre-207ENSMUST00000211140 Pes1Q9EQ61 584 aaKnown RBP21,94■■□□□ 1,1
Ptpre-207ENSMUST00000211140 Iqcf3Q9D498 203 aa21,94■■□□□ 1,1
Ptpre-207ENSMUST00000211140 Dnttip2Q8R2M2 758 aaKnown RBP21,93■■□□□ 1,1
Ptpre-207ENSMUST00000211140 AU015836B2RUM3 263 aa21,93■■□□□ 1,1
Ptpre-207ENSMUST00000211140 Cnga1P29974 684 aa21,93■■□□□ 1,1
Ptpre-207ENSMUST00000211140 Rtn4Q99P72 1162 aaKnown RBP21,91■■□□□ 1,1
Ptpre-207ENSMUST00000211140 Erich6bQ9D4S6 220 aa21,9■■□□□ 1,1
Ptpre-207ENSMUST00000211140 NgefQ8CHT1 710 aa21,89■■□□□ 1,1
Ptpre-207ENSMUST00000211140 Chmp5Q9D7S9 219 aa21,88■■□□□ 1,09
Ptpre-207ENSMUST00000211140 Dnai1Q8C0M8 701 aa21,88■■□□□ 1,09
Ptpre-207ENSMUST00000211140 MccE9PWI3 1003 aa21,87■■□□□ 1,09
Ptpre-207ENSMUST00000211140 Exoc6Q8R313 802 aa21,86■■□□□ 1,09
Ptpre-207ENSMUST00000211140 Rundc1Q0VDN7 615 aa21,84■■□□□ 1,09
Ptpre-207ENSMUST00000211140 Speer4f1Q9D5Q6 258 aa21,83■■□□□ 1,08
Ptpre-207ENSMUST00000211140 Clstn1Q9EPL2 979 aa21,83■■□□□ 1,08
Ptpre-207ENSMUST00000211140 EspnQ9ET47 871 aa21,82■■□□□ 1,08
Ptpre-207ENSMUST00000211140 Ipo9Q91YE6 1041 aa21,82■■□□□ 1,08
Ptpre-207ENSMUST00000211140 Fhad1A6PWD2 1420 aa21,81■■□□□ 1,08
Ptpre-207ENSMUST00000211140 Tnnt2P50752 301 aa21,81■■□□□ 1,08
Ptpre-207ENSMUST00000211140 HnrnpuQ8VEK3 800 aaKnown RBP21,81■■□□□ 1,08
Ptpre-207ENSMUST00000211140 Ercc6F8VPZ5 1481 aa21,8■■□□□ 1,08
Ptpre-207ENSMUST00000211140 Pkd2O35245 966 aa21,8■■□□□ 1,08
Retrieved 100 of 22,080 RNA–protein pairs in 11,1 ms