RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Ppp4r2Q0VGB7 417 aa12.56□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Npm2Q80W85 207 aa12.56□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 4933416C03RikQ3V063 378 aa12.56□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 TonslQ6NZL6 1363 aa12.55□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Npm1Q61937 292 aaKnown RBP12.55□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Znf692Q3U381 531 aa12.54□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Fmn1Q05860 1466 aa12.54□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Pak3Q61036 559 aa12.53□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Dnajc5bQ9CQ94 199 aa12.53□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Ipo4Q8VI75 1082 aa12.52□□□□□ -0.4
Prpf40a-208ENSMUST00000210789 Zbtb4Q5F293 982 aa12.52□□□□□ -0.41
Prpf40a-208ENSMUST00000210789 Ccdc27Q3V036 639 aa12.52□□□□□ -0.41
Prpf40a-208ENSMUST00000210789 Thoc2B1AZI6 1594 aaKnown RBP12.51□□□□□ -0.41
Prpf40a-208ENSMUST00000210789 Top2bQ64511 1612 aa12.51□□□□□ -0.41
Prpf40a-208ENSMUST00000210789 Slc24a1Q91WD8 1130 aa12.5□□□□□ -0.41
Prpf40a-208ENSMUST00000210789 Cc2d2aQ8CFW7 1633 aa12.49□□□□□ -0.41
Prpf40a-208ENSMUST00000210789 Myt1lP97500 1187 aa12.45□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 Hsp90aa1P07901 733 aaKnown RBP12.44□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 Cux2P70298 1426 aa12.43□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 Znf710Q3U288 666 aa12.43□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 DaxxO35613 739 aa12.43□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 AampJ3QN89 436 aa12.42□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 Gtf3c5Q8R2T8 520 aa12.42□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 Ccdc18Q640L5 1455 aa12.41□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 Eif5bQ05D44 1216 aaKnown RBP12.4□□□□□ -0.42
Prpf40a-208ENSMUST00000210789 Wdr43Q6ZQL4 677 aaKnown RBP12.39□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 Kcnn1Q9EQR3 537 aa12.38□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 Fam135aQ6NS59 1506 aa12.38□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 Ccer2J3QPU5 274 aa12.38□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 NgefQ8CHT1 710 aa12.38□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 Stra8P70278 393 aa12.36□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 Lamc3Q9R0B6 1581 aa12.35□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 Slc4a3P16283 1227 aa12.34□□□□□ -0.43
Prpf40a-208ENSMUST00000210789 Chrna2Q91X60 512 aa12.31□□□□□ -0.44
Prpf40a-208ENSMUST00000210789 Ccdc9Q8VC31 543 aaKnown RBP12.31□□□□□ -0.44
Prpf40a-208ENSMUST00000210789 Top2aQ01320 1528 aaKnown RBP12.3□□□□□ -0.44
Prpf40a-208ENSMUST00000210789 Eid3Q3V124 375 aa12.29□□□□□ -0.44
Prpf40a-208ENSMUST00000210789 Zbtb7cQ8VCZ7 619 aa12.29□□□□□ -0.44
Prpf40a-208ENSMUST00000210789 Unc13aQ4KUS2 1712 aa12.28□□□□□ -0.44
Prpf40a-208ENSMUST00000210789 Egfem1Q8C088 590 aa12.27□□□□□ -0.44
Prpf40a-208ENSMUST00000210789 Armcx1Q9CX83 456 aa12.27□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 Liat1Q810M6 228 aa12.27□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 Mrc2Q64449 1479 aa12.26□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 TnnQ80Z71 1560 aa12.26□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 IbspQ61711 324 aa12.25□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 LrpprcQ6PB66 1392 aaKnown RBP12.25□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 P3h3Q8CG70 732 aa12.25□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 Camsap1A2AHC3 1581 aa12.22□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 BccipQ9CWI3 316 aa12.22□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 Baz1bQ9Z277 1479 aa12.22□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 Scaf1Q5U4C3 1256 aaKnown RBP12.21□□□□□ -0.45
Prpf40a-208ENSMUST00000210789 Dhx29Q6PGC1 1365 aaKnown RBP12.2□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 Cep162Q6ZQ06 1403 aa12.19□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 Rapgef2Q8CHG7 1496 aa12.19□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 ChgaP26339 463 aaKnown RBP12.18□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 Vgll3P85442 326 aa12.18□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 DmtnQ9WV69 405 aa12.17□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 NeflP08551 543 aa12.17□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 Rbm10Q99KG3 930 aaKnown RBP12.17□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 Grin2bQ01097 1482 aa12.16□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 Ipo9Q91YE6 1041 aa12.16□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 Dnttip2Q8R2M2 758 aaKnown RBP12.15□□□□□ -0.46
Prpf40a-208ENSMUST00000210789 NrkQ9R0G8 1455 aa12.14□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 Iqcf3Q9D498 203 aa12.14□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 PtprkP35822 1457 aa12.13□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 PogzQ8BZH4 1409 aaKnown RBP12.13□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 Shroom4Q1W617 1475 aa12.12□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 Efcab5A0JP43 1406 aa12.12□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 Duox2A2AQ99 1517 aa12.11□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 Pdcl3Q8BVF2 240 aa12.11□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 Znf316Q6PGE4 1016 aa12.09□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 TimelessQ9R1X4 1197 aa12.09□□□□□ -0.47
Prpf40a-208ENSMUST00000210789 Washc2Q6PGL7 1334 aa12.08□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 Clip1Q922J3 1391 aa12.08□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 Rpap1Q80TE0 1409 aa12.08□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 Arhgap27A2AB59 869 aa12.07□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 Zfp91Q62511 572 aa12.07□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 CatipB9EKE5 520 aa12.05□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 NclP09405 707 aaKnown RBP12.03□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 Sin3aQ60520 1274 aaKnown RBP12.03□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 Arhgap35Q91YM2 1499 aa12.03□□□□□ -0.48
Prpf40a-208ENSMUST00000210789 Kcnh8P59111 1102 aa12.02□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Gtf2a1Q99PM3 378 aa12.02□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Plb1Q3TTY0 1478 aa12.01□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Urb2E9Q7L1 1524 aaKnown RBP12.01□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Setd5Q5XJV7 1441 aa12.01□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Kif21aQ9QXL2 1672 aa12.01□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Crocc2F6XLV1 1638 aa12□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Plekhg3Q4VAC9 1341 aa12□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Rad54l2Q99NG0 1466 aa11.99□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Mroh2bQ7M6Y6 1581 aa11.99□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Eea1Q8BL66 1411 aa11.98□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Carmil1Q6EDY6 1374 aa11.98□□□□□ -0.49
Prpf40a-208ENSMUST00000210789 Map3k1P53349 1493 aa11.96□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 AU015836B2RUM3 263 aa11.95□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 Rrp9Q91WM3 475 aaKnown RBP11.93□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 Spryd3E9Q9B3 442 aa11.93□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 Stard8Q8K031 1019 aa11.92□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 Lmod2Q3UHZ5 550 aa11.91□□□□□ -0.5
Prpf40a-208ENSMUST00000210789 CanxP35564 591 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms